RNA–Protein interactions for RNA: ENST00000425967.7

FGFR1-211, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 5,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-211ENST00000425967 Q8NDZ9 215 aa7.75□□□□□ -1.17
FGFR1-211ENST00000425967 CHD9Q3L8U1 2897 aa7.74□□□□□ -1.17
FGFR1-211ENST00000425967 DMAC1Q96GE9 116 aa7.73□□□□□ -1.17
FGFR1-211ENST00000425967 Q8N9P0 234 aaPredicted RBP7.73□□□□□ -1.17
FGFR1-211ENST00000425967 Q75L30 129 aa7.72□□□□□ -1.17
FGFR1-211ENST00000425967 STAB1Q9NY15 2570 aa7.72□□□□□ -1.17
FGFR1-211ENST00000425967 TRANK1O15050 2925 aa7.72□□□□□ -1.17
FGFR1-211ENST00000425967 SPRR1BP22528 89 aa7.72□□□□□ -1.17
FGFR1-211ENST00000425967 SEC61BP60468 96 aaKnown RBP7.7□□□□□ -1.18
FGFR1-211ENST00000425967 MGAQ8IWI9 3026 aa7.7□□□□□ -1.18
FGFR1-211ENST00000425967 LINC01558Q9Y6Z2 57 aa7.69□□□□□ -1.18
FGFR1-211ENST00000425967 Q5W150 140 aa7.68□□□□□ -1.18
FGFR1-211ENST00000425967 SPINK7P58062 85 aa7.68□□□□□ -1.18
FGFR1-211ENST00000425967 LINC00472Q9H8W2 130 aa7.67□□□□□ -1.18
FGFR1-211ENST00000425967 CYSTM1Q9H1C7 97 aa7.66□□□□□ -1.18
FGFR1-211ENST00000425967 TEX15Q9BXT5 2789 aa7.65□□□□□ -1.18
FGFR1-211ENST00000425967 Q5VSD8 79 aa7.65□□□□□ -1.18
FGFR1-211ENST00000425967 R4GN34 69 aa7.65□□□□□ -1.18
FGFR1-211ENST00000425967 LAMA2P24043 3122 aaKnown RBP7.65□□□□□ -1.19
FGFR1-211ENST00000425967 LAMA3Q16787 3333 aa7.62□□□□□ -1.19
FGFR1-211ENST00000425967 TEP1Q99973 2627 aaKnown RBP7.61□□□□□ -1.19
FGFR1-211ENST00000425967 LCE6AA0A183 80 aa7.61□□□□□ -1.19
FGFR1-211ENST00000425967 NBEAL1Q6ZS30 2694 aa7.61□□□□□ -1.19
FGFR1-211ENST00000425967 KRTAP1-5Q9BYS1 174 aa7.61□□□□□ -1.19
FGFR1-211ENST00000425967 TNRC18O15417 2968 aaPredicted RBP7.6□□□□□ -1.19
FGFR1-211ENST00000425967 Q5XG85 94 aa7.6□□□□□ -1.19
FGFR1-211ENST00000425967 MKI67P46013 3256 aaKnown RBP7.59□□□□□ -1.19
FGFR1-211ENST00000425967 GCN1Q92616 2671 aaKnown RBP7.59□□□□□ -1.19
FGFR1-211ENST00000425967 WDFY4Q6ZS81 3184 aa7.59□□□□□ -1.2
FGFR1-211ENST00000425967 FP248Q71RG6 208 aaPredicted RBP7.58□□□□□ -1.2
FGFR1-211ENST00000425967 ZNF292O60281 2723 aa7.58□□□□□ -1.2
FGFR1-211ENST00000425967 KRTAP10-1P60331 282 aa7.58□□□□□ -1.2
FGFR1-211ENST00000425967 UNC79Q9P2D8 2635 aa7.57□□□□□ -1.2
FGFR1-211ENST00000425967 NOTCH1P46531 2555 aa7.56□□□□□ -1.2
FGFR1-211ENST00000425967 KRTAP26-1Q6PEX3 210 aa7.56□□□□□ -1.2
FGFR1-211ENST00000425967 MAP1AP78559 2803 aaPredicted RBP7.55□□□□□ -1.2
FGFR1-211ENST00000425967 KRTAP10-2P60368 255 aa7.54□□□□□ -1.2
FGFR1-211ENST00000425967 SETXQ7Z333 2677 aaKnown RBP7.53□□□□□ -1.2
FGFR1-211ENST00000425967 BRCA2P51587 3418 aa7.53□□□□□ -1.2
FGFR1-211ENST00000425967 COL6A5A8TX70 2615 aa7.52□□□□□ -1.21
FGFR1-211ENST00000425967 FLG2Q5D862 2391 aaPredicted RBP7.51□□□□□ -1.21
FGFR1-211ENST00000425967 RPL37P61927 97 aaKnown RBP7.5□□□□□ -1.21
FGFR1-211ENST00000425967 Q5VV11 94 aa7.5□□□□□ -1.21
FGFR1-211ENST00000425967 M0QZ58 72 aa7.48□□□□□ -1.21
FGFR1-211ENST00000425967 TRIOO75962 3097 aa7.48□□□□□ -1.21
FGFR1-211ENST00000425967 NBEAL2Q6ZNJ1 2754 aa7.48□□□□□ -1.21
FGFR1-211ENST00000425967 PRAC1Q96KF2 57 aa7.48□□□□□ -1.21
FGFR1-211ENST00000425967 OXTP01178 125 aa7.47□□□□□ -1.21
FGFR1-211ENST00000425967 PRUNE2Q8WUY3 3088 aa7.47□□□□□ -1.21
FGFR1-211ENST00000425967 A0A0A0MQY5 61 aa7.46□□□□□ -1.22
FGFR1-211ENST00000425967 DSPP15924 2871 aaKnown RBP7.45□□□□□ -1.22
FGFR1-211ENST00000425967 ROMO1P60602 79 aa7.44□□□□□ -1.22
FGFR1-211ENST00000425967 XIRP2A4UGR9 3374 aa7.44□□□□□ -1.22
FGFR1-211ENST00000425967 H1FX-AS1Q4G0G2 97 aa7.44□□□□□ -1.22
FGFR1-211ENST00000425967 PLAC4Q8WY50 150 aa7.43□□□□□ -1.22
FGFR1-211ENST00000425967 UNC80Q8N2C7 3258 aa7.42□□□□□ -1.22
FGFR1-211ENST00000425967 Q6ZR54 194 aa7.41□□□□□ -1.22
FGFR1-211ENST00000425967 FRYQ5TBA9 3013 aa7.41□□□□□ -1.22
FGFR1-211ENST00000425967 VPS13AQ96RL7 3174 aa7.41□□□□□ -1.22
FGFR1-211ENST00000425967 UBR5O95071 2799 aaPredicted RBP7.4□□□□□ -1.22
FGFR1-211ENST00000425967 KRTAP4-16G5E9R7 235 aaPredicted RBP7.39□□□□□ -1.23
FGFR1-211ENST00000425967 PANO1I0J062 215 aa7.39□□□□□ -1.23
FGFR1-211ENST00000425967 FREM2Q5SZK8 3169 aa7.39□□□□□ -1.23
FGFR1-211ENST00000425967 ADM2Q7Z4H4 148 aa7.38□□□□□ -1.23
FGFR1-211ENST00000425967 DMBT1Q9UGM3 2413 aaPredicted RBP7.35□□□□□ -1.23
FGFR1-211ENST00000425967 A0A087X002 238 aa7.35□□□□□ -1.23
FGFR1-211ENST00000425967 KRTAP29-1A8MX34 341 aaPredicted RBP7.33□□□□□ -1.24
FGFR1-211ENST00000425967 IGSF10Q6WRI0 2623 aa7.32□□□□□ -1.24
FGFR1-211ENST00000425967 BAHCC1Q9P281 2608 aa7.32□□□□□ -1.24
FGFR1-211ENST00000425967 STAB2Q8WWQ8 2551 aa7.31□□□□□ -1.24
FGFR1-211ENST00000425967 SPATA8Q6RVD6 105 aa7.3□□□□□ -1.24
FGFR1-211ENST00000425967 RPS29P62273 56 aaKnown RBP7.29□□□□□ -1.24
FGFR1-211ENST00000425967 ASB16-AS1Q495Z4 193 aa7.27□□□□□ -1.25
FGFR1-211ENST00000425967 CELSR3Q9NYQ7 3312 aa7.27□□□□□ -1.25
FGFR1-211ENST00000425967 NSD1Q96L73 2696 aaPredicted RBP7.26□□□□□ -1.25
FGFR1-211ENST00000425967 H3BS24 57 aa7.26□□□□□ -1.25
FGFR1-211ENST00000425967 KALRNO60229 2985 aa7.24□□□□□ -1.25
FGFR1-211ENST00000425967 NOTCH2NLQ7Z3S9 236 aa7.23□□□□□ -1.25
FGFR1-211ENST00000425967 ITPR1Q14643 2758 aa7.22□□□□□ -1.25
FGFR1-211ENST00000425967 CDH23Q9H251 3354 aa7.21□□□□□ -1.26
FGFR1-211ENST00000425967 TACC2O95359 2948 aa7.21□□□□□ -1.26
FGFR1-211ENST00000425967 Q6ZRN7 208 aaPredicted RBP7.2□□□□□ -1.26
FGFR1-211ENST00000425967 KRTAP11-1Q8IUC1 163 aa7.19□□□□□ -1.26
FGFR1-211ENST00000425967 DMXL2Q8TDJ6 3036 aa7.19□□□□□ -1.26
FGFR1-211ENST00000425967 ITPR2Q14571 2701 aa7.17□□□□□ -1.26
FGFR1-211ENST00000425967 NBEAQ8NFP9 2946 aa7.16□□□□□ -1.26
FGFR1-211ENST00000425967 A8MUU9 505 aa7.16□□□□□ -1.26
FGFR1-211ENST00000425967 ATMQ13315 3056 aa7.15□□□□□ -1.26
FGFR1-211ENST00000425967 KRTAP7-1Q8IUC3 87 aa7.14□□□□□ -1.27
FGFR1-211ENST00000425967 ASH1LQ9NR48 2969 aaKnown RBP7.13□□□□□ -1.27
FGFR1-211ENST00000425967 FLNCQ14315 2725 aa7.12□□□□□ -1.27
FGFR1-211ENST00000425967 KRTAP13-2Q52LG2 175 aa7.11□□□□□ -1.27
FGFR1-211ENST00000425967 LAMA1P25391 3075 aa7.1□□□□□ -1.27
FGFR1-211ENST00000425967 VCANP13611 3396 aa7.1□□□□□ -1.27
FGFR1-211ENST00000425967 COL12A1Q99715 3063 aa7.1□□□□□ -1.27
FGFR1-211ENST00000425967 C20orf166-AS1Q96NR2 134 aa7.09□□□□□ -1.27
FGFR1-211ENST00000425967 ADGRG4Q8IZF6 3080 aa7.08□□□□□ -1.28
FGFR1-211ENST00000425967 UTP20O75691 2785 aaKnown RBP7.08□□□□□ -1.28
FGFR1-211ENST00000425967 REV3LO60673 3130 aa7.07□□□□□ -1.28
FGFR1-211ENST00000425967 KRTAP13-1Q8IUC0 172 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms