RNA–Protein interactions for RNA: ENST00000424248.2

DENND3-202, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene DENND3, Length 4,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-202ENST00000424248 TNP2Q05952 138 aa8.71□□□□□ -1.02
DENND3-202ENST00000424248 J3QL48 77 aa8.71□□□□□ -1.02
DENND3-202ENST00000424248 LINC00472Q9H8W2 130 aa8.7□□□□□ -1.02
DENND3-202ENST00000424248 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.7□□□□□ -1.02
DENND3-202ENST00000424248 COL6A5A8TX70 2615 aa8.69□□□□□ -1.02
DENND3-202ENST00000424248 C9orf92A6NGG3 77 aa8.68□□□□□ -1.02
DENND3-202ENST00000424248 CRIPTQ9P021 101 aa8.68□□□□□ -1.02
DENND3-202ENST00000424248 WDFY4Q6ZS81 3184 aa8.68□□□□□ -1.02
DENND3-202ENST00000424248 DSPP15924 2871 aaKnown RBP8.68□□□□□ -1.02
DENND3-202ENST00000424248 LAMA2P24043 3122 aaKnown RBP8.68□□□□□ -1.02
DENND3-202ENST00000424248 IGSF10Q6WRI0 2623 aa8.67□□□□□ -1.02
DENND3-202ENST00000424248 PLAC8Q9NZF1 115 aa8.66□□□□□ -1.02
DENND3-202ENST00000424248 GCN1Q92616 2671 aaKnown RBP8.65□□□□□ -1.02
DENND3-202ENST00000424248 HRES1P13985 223 aa8.65□□□□□ -1.02
DENND3-202ENST00000424248 KRTAP26-1Q6PEX3 210 aa8.65□□□□□ -1.03
DENND3-202ENST00000424248 NOTCH1P46531 2555 aa8.62□□□□□ -1.03
DENND3-202ENST00000424248 LINC01554Q52M75 96 aa8.61□□□□□ -1.03
DENND3-202ENST00000424248 ZCCHC13Q8WW36 166 aaKnown RBP8.59□□□□□ -1.03
DENND3-202ENST00000424248 PRUNE2Q8WUY3 3088 aa8.58□□□□□ -1.04
DENND3-202ENST00000424248 MAP1AP78559 2803 aaPredicted RBP8.58□□□□□ -1.04
DENND3-202ENST00000424248 BRCA2P51587 3418 aa8.58□□□□□ -1.04
DENND3-202ENST00000424248 SETXQ7Z333 2677 aaKnown RBP8.57□□□□□ -1.04
DENND3-202ENST00000424248 COX6B2Q6YFQ2 88 aa8.57□□□□□ -1.04
DENND3-202ENST00000424248 Q8N1X5 172 aa8.56□□□□□ -1.04
DENND3-202ENST00000424248 NBEAL1Q6ZS30 2694 aa8.56□□□□□ -1.04
DENND3-202ENST00000424248 KRTAP4-16G5E9R7 235 aaPredicted RBP8.56□□□□□ -1.04
DENND3-202ENST00000424248 KRTAP1-5Q9BYS1 174 aa8.54□□□□□ -1.04
DENND3-202ENST00000424248 KRTAP29-1A8MX34 341 aaPredicted RBP8.53□□□□□ -1.04
DENND3-202ENST00000424248 A0A1B0GU33 70 aa8.52□□□□□ -1.04
DENND3-202ENST00000424248 SPINK7P58062 85 aa8.52□□□□□ -1.05
DENND3-202ENST00000424248 UBR5O95071 2799 aaPredicted RBP8.52□□□□□ -1.05
DENND3-202ENST00000424248 TRIOO75962 3097 aa8.51□□□□□ -1.05
DENND3-202ENST00000424248 ASB16-AS1Q495Z4 193 aa8.5□□□□□ -1.05
DENND3-202ENST00000424248 Q6ZR54 194 aa8.5□□□□□ -1.05
DENND3-202ENST00000424248 VPS13AQ96RL7 3174 aa8.5□□□□□ -1.05
DENND3-202ENST00000424248 LCE6AA0A183 80 aa8.5□□□□□ -1.05
DENND3-202ENST00000424248 Q5W150 140 aa8.48□□□□□ -1.05
DENND3-202ENST00000424248 UNC80Q8N2C7 3258 aa8.46□□□□□ -1.05
DENND3-202ENST00000424248 NBEAL2Q6ZNJ1 2754 aa8.46□□□□□ -1.06
DENND3-202ENST00000424248 FRYQ5TBA9 3013 aa8.46□□□□□ -1.06
DENND3-202ENST00000424248 PRAC1Q96KF2 57 aa8.45□□□□□ -1.06
DENND3-202ENST00000424248 DMAC1Q96GE9 116 aa8.44□□□□□ -1.06
DENND3-202ENST00000424248 FLNCQ14315 2725 aa8.42□□□□□ -1.06
DENND3-202ENST00000424248 LINC00483Q53H64 154 aa8.41□□□□□ -1.06
DENND3-202ENST00000424248 Q6ZSA8 131 aa8.39□□□□□ -1.07
DENND3-202ENST00000424248 XIRP2A4UGR9 3374 aa8.39□□□□□ -1.07
DENND3-202ENST00000424248 NSD1Q96L73 2696 aaPredicted RBP8.39□□□□□ -1.07
DENND3-202ENST00000424248 A0A0D9SG42 100 aa8.38□□□□□ -1.07
DENND3-202ENST00000424248 ITPR1Q14643 2758 aa8.38□□□□□ -1.07
DENND3-202ENST00000424248 BAHCC1Q9P281 2608 aa8.38□□□□□ -1.07
DENND3-202ENST00000424248 CSAG1Q6PB30 78 aa8.36□□□□□ -1.07
DENND3-202ENST00000424248 ITPR2Q14571 2701 aa8.35□□□□□ -1.07
DENND3-202ENST00000424248 H3BS24 57 aa8.31□□□□□ -1.08
DENND3-202ENST00000424248 KRTAP10-1P60331 282 aa8.3□□□□□ -1.08
DENND3-202ENST00000424248 STAB2Q8WWQ8 2551 aa8.29□□□□□ -1.08
DENND3-202ENST00000424248 A6NN06 94 aa8.28□□□□□ -1.08
DENND3-202ENST00000424248 SPATA8Q6RVD6 105 aa8.28□□□□□ -1.08
DENND3-202ENST00000424248 NBEAQ8NFP9 2946 aa8.28□□□□□ -1.08
DENND3-202ENST00000424248 KRTAP10-2P60368 255 aa8.28□□□□□ -1.08
DENND3-202ENST00000424248 CDH23Q9H251 3354 aa8.27□□□□□ -1.08
DENND3-202ENST00000424248 ATMQ13315 3056 aa8.26□□□□□ -1.09
DENND3-202ENST00000424248 PANO1I0J062 215 aa8.25□□□□□ -1.09
DENND3-202ENST00000424248 LUZP6Q538Z0 58 aa8.25□□□□□ -1.09
DENND3-202ENST00000424248 KMT2BQ9UMN6 2715 aaPredicted RBP8.22□□□□□ -1.09
DENND3-202ENST00000424248 KALRNO60229 2985 aa8.21□□□□□ -1.1
DENND3-202ENST00000424248 FRYLO94915 3013 aa8.21□□□□□ -1.1
DENND3-202ENST00000424248 LAMA1P25391 3075 aa8.2□□□□□ -1.1
DENND3-202ENST00000424248 TACC2O95359 2948 aa8.2□□□□□ -1.1
DENND3-202ENST00000424248 COL12A1Q99715 3063 aa8.2□□□□□ -1.1
DENND3-202ENST00000424248 RPL37P61927 97 aaKnown RBP8.19□□□□□ -1.1
DENND3-202ENST00000424248 ADGRG4Q8IZF6 3080 aa8.18□□□□□ -1.1
DENND3-202ENST00000424248 S4R3F8 94 aa8.18□□□□□ -1.1
DENND3-202ENST00000424248 Q6ZRN7 208 aaPredicted RBP8.18□□□□□ -1.1
DENND3-202ENST00000424248 H1FX-AS1Q4G0G2 97 aa8.17□□□□□ -1.1
DENND3-202ENST00000424248 KRTAP7-1Q8IUC3 87 aa8.17□□□□□ -1.1
DENND3-202ENST00000424248 Q5VSD8 79 aa8.17□□□□□ -1.1
DENND3-202ENST00000424248 ROMO1P60602 79 aa8.17□□□□□ -1.1
DENND3-202ENST00000424248 FLG2Q5D862 2391 aaPredicted RBP8.16□□□□□ -1.1
DENND3-202ENST00000424248 A0A087X002 238 aa8.15□□□□□ -1.1
DENND3-202ENST00000424248 UTP20O75691 2785 aaKnown RBP8.15□□□□□ -1.1
DENND3-202ENST00000424248 NIPBLQ6KC79 2804 aaeCLIP8.14□□□□□ -1.11
DENND3-202ENST00000424248 HIVEP1P15822 2718 aa8.14□□□□□ -1.11
DENND3-202ENST00000424248 SEC61BP60468 96 aaKnown RBP8.14□□□□□ -1.11
DENND3-202ENST00000424248 SZT2Q5T011 3432 aa8.13□□□□□ -1.11
DENND3-202ENST00000424248 DMBT1Q9UGM3 2413 aaPredicted RBP8.13□□□□□ -1.11
DENND3-202ENST00000424248 CELSR3Q9NYQ7 3312 aa8.12□□□□□ -1.11
DENND3-202ENST00000424248 NOTCH2NLQ7Z3S9 236 aa8.12□□□□□ -1.11
DENND3-202ENST00000424248 CAMK2N1Q7Z7J9 78 aa8.11□□□□□ -1.11
DENND3-202ENST00000424248 DMXL2Q8TDJ6 3036 aa8.1□□□□□ -1.11
DENND3-202ENST00000424248 RPS29P62273 56 aaKnown RBP8.09□□□□□ -1.11
DENND3-202ENST00000424248 KRTAP13-1Q8IUC0 172 aa8.09□□□□□ -1.11
DENND3-202ENST00000424248 KRTAP11-1Q8IUC1 163 aa8.09□□□□□ -1.11
DENND3-202ENST00000424248 BOD1L1Q8NFC6 3051 aa8.08□□□□□ -1.12
DENND3-202ENST00000424248 VCANP13611 3396 aa8.08□□□□□ -1.12
DENND3-202ENST00000424248 LRBAP50851 2863 aa8.07□□□□□ -1.12
DENND3-202ENST00000424248 APCP25054 2843 aa8.07□□□□□ -1.12
DENND3-202ENST00000424248 FREM2Q5SZK8 3169 aa8.06□□□□□ -1.12
DENND3-202ENST00000424248 ZZEF1O43149 2961 aa8.04□□□□□ -1.12
DENND3-202ENST00000424248 A8MU10 97 aa8.02□□□□□ -1.13
DENND3-202ENST00000424248 R4GN34 69 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms