RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 ZNF861PO60384 105 aa2.39□□□□□ -2.03
TOP2A-201ENST00000423485 RNASE3P12724 160 aaKnown RBP2.39□□□□□ -2.03
TOP2A-201ENST00000423485 TRAV23DV6A0A075B6W5 121 aa2.38□□□□□ -2.03
TOP2A-201ENST00000423485 TRBV6-5A0A0K0K1A5 114 aa2.38□□□□□ -2.03
TOP2A-201ENST00000423485 IGLC6P0CF74 106 aa2.38□□□□□ -2.03
TOP2A-201ENST00000423485 COX17Q14061 63 aa2.38□□□□□ -2.03
TOP2A-201ENST00000423485 PHF5AQ7RTV0 110 aaKnown RBP2.38□□□□□ -2.03
TOP2A-201ENST00000423485 D6R8Y8 96 aa2.38□□□□□ -2.03
TOP2A-201ENST00000423485 SNAI2O43623 268 aa2.38□□□□□ -2.03
TOP2A-201ENST00000423485 NEXN-AS1Q8NBZ9 246 aa2.38□□□□□ -2.03
TOP2A-201ENST00000423485 TOMM6Q96B49 74 aa2.38□□□□□ -2.03
TOP2A-201ENST00000423485 PRO1854Q9UHT4 67 aa2.38□□□□□ -2.03
TOP2A-201ENST00000423485 C11orf72Q8NBR9 251 aa2.38□□□□□ -2.03
TOP2A-201ENST00000423485 FAM167A-AS1Q96KT0 104 aa2.38□□□□□ -2.03
TOP2A-201ENST00000423485 IGHV6-1A0A0B4J1U7 121 aa2.38□□□□□ -2.03
TOP2A-201ENST00000423485 TEX49A0A1B0GTD5 131 aa2.38□□□□□ -2.03
TOP2A-201ENST00000423485 OBSCN-AS1Q96MR7 158 aa2.38□□□□□ -2.03
TOP2A-201ENST00000423485 LITAFQ99732 161 aa2.38□□□□□ -2.03
TOP2A-201ENST00000423485 C22orf24Q9Y442 160 aa2.38□□□□□ -2.03
TOP2A-201ENST00000423485 CD164Q04900 197 aa2.38□□□□□ -2.03
TOP2A-201ENST00000423485 FXYD5Q96DB9 178 aa2.38□□□□□ -2.03
TOP2A-201ENST00000423485 PYGO1Q9Y3Y4 419 aa2.38□□□□□ -2.03
TOP2A-201ENST00000423485 H0YGX0 51 aa2.37□□□□□ -2.03
TOP2A-201ENST00000423485 IGLV6-57P01721 117 aa2.37□□□□□ -2.03
TOP2A-201ENST00000423485 ZNF80P51504 273 aaPredicted RBP2.37□□□□□ -2.03
TOP2A-201ENST00000423485 PRR15Q8IV56 129 aa2.37□□□□□ -2.03
TOP2A-201ENST00000423485 RETNLBQ9BQ08 111 aa2.37□□□□□ -2.03
TOP2A-201ENST00000423485 DEFB1P60022 68 aa2.37□□□□□ -2.03
TOP2A-201ENST00000423485 PRR26Q8N8Z3 221 aa2.37□□□□□ -2.03
TOP2A-201ENST00000423485 SMCR5Q8TEV8 140 aa2.37□□□□□ -2.03
TOP2A-201ENST00000423485 LINC00313P59037 77 aa2.36□□□□□ -2.03
TOP2A-201ENST00000423485 KLKP1Q107X0 134 aa2.36□□□□□ -2.03
TOP2A-201ENST00000423485 GDF5OSQ5U4N7 250 aa2.36□□□□□ -2.03
TOP2A-201ENST00000423485 CFC1P0CG37 223 aa2.36□□□□□ -2.03
TOP2A-201ENST00000423485 SMCPP49901 116 aaPredicted RBP2.36□□□□□ -2.03
TOP2A-201ENST00000423485 ZFAND3Q9H8U3 227 aa2.36□□□□□ -2.03
TOP2A-201ENST00000423485 A0A1B0GUV1 79 aa2.35□□□□□ -2.03
TOP2A-201ENST00000423485 FAM104AQ969W3 186 aa2.35□□□□□ -2.03
TOP2A-201ENST00000423485 ZNF22P17026 224 aaPredicted RBP2.35□□□□□ -2.03
TOP2A-201ENST00000423485 PRLHP81277 87 aa2.35□□□□□ -2.03
TOP2A-201ENST00000423485 CLEC2BQ92478 149 aa2.35□□□□□ -2.03
TOP2A-201ENST00000423485 A0A096LNJ9 63 aa2.35□□□□□ -2.03
TOP2A-201ENST00000423485 EIF4EBP3O60516 100 aaPredicted RBP2.35□□□□□ -2.03
TOP2A-201ENST00000423485 PRR3P79522 188 aaKnown RBP2.35□□□□□ -2.03
TOP2A-201ENST00000423485 ETDBQ3ZM63 59 aa2.35□□□□□ -2.03
TOP2A-201ENST00000423485 Q8IZM0 81 aa2.35□□□□□ -2.03
TOP2A-201ENST00000423485 IGKV2D-30A0A075B6S6 120 aa2.34□□□□□ -2.03
TOP2A-201ENST00000423485 TRAV7A0A075B6U4 112 aa2.34□□□□□ -2.03
TOP2A-201ENST00000423485 IGKV2-30P06310 120 aa2.34□□□□□ -2.03
TOP2A-201ENST00000423485 C1orf195Q5TG92 126 aa2.34□□□□□ -2.03
TOP2A-201ENST00000423485 FXYD2P54710 66 aa2.34□□□□□ -2.03
TOP2A-201ENST00000423485 WFDC2Q14508 124 aa2.34□□□□□ -2.03
TOP2A-201ENST00000423485 PRR15LQ9BU68 103 aa2.34□□□□□ -2.03
TOP2A-201ENST00000423485 PRM2P04554 102 aa2.34□□□□□ -2.04
TOP2A-201ENST00000423485 MIR7-3HGQ8N6C7 128 aa2.34□□□□□ -2.04
TOP2A-201ENST00000423485 PANO1I0J062 215 aa2.33□□□□□ -2.04
TOP2A-201ENST00000423485 FAM229BQ4G0N7 80 aa2.33□□□□□ -2.04
TOP2A-201ENST00000423485 H3BPC8 53 aa2.33□□□□□ -2.04
TOP2A-201ENST00000423485 CXCL6P80162 114 aa2.33□□□□□ -2.04
TOP2A-201ENST00000423485 NOTCH2NLQ7Z3S9 236 aa2.33□□□□□ -2.04
TOP2A-201ENST00000423485 SMKR1H3BMG3 65 aa2.33□□□□□ -2.04
TOP2A-201ENST00000423485 TINCRA0A1B0GVN0 87 aa2.33□□□□□ -2.04
TOP2A-201ENST00000423485 C8orf87E5RJ46 101 aa2.33□□□□□ -2.04
TOP2A-201ENST00000423485 IGLV5-45A0A087WSX0 123 aa2.32□□□□□ -2.04
TOP2A-201ENST00000423485 MRPL51Q4U2R6 128 aaKnown RBP2.32□□□□□ -2.04
TOP2A-201ENST00000423485 LINC00575Q6W349 94 aa2.32□□□□□ -2.04
TOP2A-201ENST00000423485 TNXBP22105 4242 aa2.32□□□□□ -2.04
TOP2A-201ENST00000423485 A8MTW9 85 aa2.32□□□□□ -2.04
TOP2A-201ENST00000423485 ELOF1P60002 83 aaKnown RBP2.32□□□□□ -2.04
TOP2A-201ENST00000423485 CYP4F30PQ9H0H9 118 aa2.32□□□□□ -2.04
TOP2A-201ENST00000423485 IGLV4-60A0A075B6I1 120 aa2.32□□□□□ -2.04
TOP2A-201ENST00000423485 UNQ6190/PRO20217Q6UXQ8 127 aa2.32□□□□□ -2.04
TOP2A-201ENST00000423485 C20orf203Q8NBC4 194 aa2.32□□□□□ -2.04
TOP2A-201ENST00000423485 GVQW2A0A096LPI5 108 aaPredicted RBP2.32□□□□□ -2.04
TOP2A-201ENST00000423485 KRTAP29-1A8MX34 341 aaPredicted RBP2.32□□□□□ -2.04
TOP2A-201ENST00000423485 CCDC179H3BU77 68 aa2.32□□□□□ -2.04
TOP2A-201ENST00000423485 J3QQQ9 107 aa2.32□□□□□ -2.04
TOP2A-201ENST00000423485 TMEM256-PLSCR3K7ERE1 68 aa2.32□□□□□ -2.04
TOP2A-201ENST00000423485 Q5XG85 94 aa2.32□□□□□ -2.04
TOP2A-201ENST00000423485 LINC00612Q8N6U2 182 aa2.32□□□□□ -2.04
TOP2A-201ENST00000423485 Q8N9L7 120 aa2.31□□□□□ -2.04
TOP2A-201ENST00000423485 TRBV27A0A0K0K1C4 114 aa2.31□□□□□ -2.04
TOP2A-201ENST00000423485 KLLNB2CW77 178 aa2.31□□□□□ -2.04
TOP2A-201ENST00000423485 MRPS12O15235 138 aaKnown RBP2.31□□□□□ -2.04
TOP2A-201ENST00000423485 KRTAP10-1P60331 282 aa2.31□□□□□ -2.04
TOP2A-201ENST00000423485 Q1T7F1 81 aa2.31□□□□□ -2.04
TOP2A-201ENST00000423485 LOC110117498A0A087WWA1 95 aa2.31□□□□□ -2.04
TOP2A-201ENST00000423485 LINC00242Q5T6M2 205 aa2.31□□□□□ -2.04
TOP2A-201ENST00000423485 CSNK1G2-AS1Q8NCQ2 148 aa2.31□□□□□ -2.04
TOP2A-201ENST00000423485 BPY2O14599 106 aa2.31□□□□□ -2.04
TOP2A-201ENST00000423485 RPL39LQ96EH5 51 aaKnown RBP2.3□□□□□ -2.04
TOP2A-201ENST00000423485 IGIPA6NJ69 53 aa2.3□□□□□ -2.04
TOP2A-201ENST00000423485 LINC00694P0DN24 101 aa2.3□□□□□ -2.04
TOP2A-201ENST00000423485 C7orf65Q6ZTY9 151 aa2.3□□□□□ -2.04
TOP2A-201ENST00000423485 CNBPP62633 177 aaKnown RBP2.3□□□□□ -2.04
TOP2A-201ENST00000423485 CAMK2N1Q7Z7J9 78 aa2.29□□□□□ -2.04
TOP2A-201ENST00000423485 FAM19A4Q96LR4 140 aa2.29□□□□□ -2.04
TOP2A-201ENST00000423485 AMELXQ99217 191 aa2.29□□□□□ -2.04
TOP2A-201ENST00000423485 PATE2Q6UY27 113 aa2.29□□□□□ -2.04
TOP2A-201ENST00000423485 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms