RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 COX8AP10176 69 aa8.71□□□□□ -1.02
COL18A1-205ENST00000423214 VAMP3Q15836 100 aa8.71□□□□□ -1.02
COL18A1-205ENST00000423214 FSIP2Q5CZC0 6907 aa8.7□□□□□ -1.02
COL18A1-205ENST00000423214 Q5XG85 94 aa8.7□□□□□ -1.02
COL18A1-205ENST00000423214 NHP2Q9NX24 153 aaKnown RBP8.7□□□□□ -1.02
COL18A1-205ENST00000423214 C14orf144Q96I85 54 aa8.69□□□□□ -1.02
COL18A1-205ENST00000423214 C1orf195Q5TG92 126 aa8.68□□□□□ -1.02
COL18A1-205ENST00000423214 LINC00575Q6W349 94 aa8.68□□□□□ -1.02
COL18A1-205ENST00000423214 PAM16Q9Y3D7 125 aa8.67□□□□□ -1.02
COL18A1-205ENST00000423214 DLEU1O43261 78 aa8.66□□□□□ -1.02
COL18A1-205ENST00000423214 RPL37P61927 97 aaKnown RBP8.66□□□□□ -1.02
COL18A1-205ENST00000423214 SPATA45Q537H7 98 aa8.66□□□□□ -1.02
COL18A1-205ENST00000423214 hADV29S1A0JD25 119 aa8.65□□□□□ -1.02
COL18A1-205ENST00000423214 M0R2T5 61 aa8.65□□□□□ -1.02
COL18A1-205ENST00000423214 COX6B2Q6YFQ2 88 aa8.65□□□□□ -1.02
COL18A1-205ENST00000423214 TCL1BO95988 128 aa8.64□□□□□ -1.03
COL18A1-205ENST00000423214 Q6ZQY7 126 aa8.64□□□□□ -1.03
COL18A1-205ENST00000423214 F8WEM9 126 aa8.63□□□□□ -1.03
COL18A1-205ENST00000423214 VAMP8Q9BV40 100 aa8.62□□□□□ -1.03
COL18A1-205ENST00000423214 CFC1P0CG37 223 aa8.61□□□□□ -1.03
COL18A1-205ENST00000423214 KRTAP10-6P60371 365 aaPredicted RBP8.61□□□□□ -1.03
COL18A1-205ENST00000423214 PYY3Q5JQD4 70 aa8.61□□□□□ -1.03
COL18A1-205ENST00000423214 LORP23490 312 aaPredicted RBP8.6□□□□□ -1.03
COL18A1-205ENST00000423214 BVES-AS1Q5T3Y7 98 aa8.6□□□□□ -1.03
COL18A1-205ENST00000423214 C2orf91Q6ZV80 131 aa8.6□□□□□ -1.03
COL18A1-205ENST00000423214 HIGD1BQ9P298 99 aa8.6□□□□□ -1.03
COL18A1-205ENST00000423214 RAB37Q96AX2 223 aa8.59□□□□□ -1.03
COL18A1-205ENST00000423214 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.57□□□□□ -1.04
COL18A1-205ENST00000423214 FLGP20930 4061 aaPredicted RBP8.56□□□□□ -1.04
COL18A1-205ENST00000423214 OCIAD2Q56VL3 154 aa8.55□□□□□ -1.04
COL18A1-205ENST00000423214 A0A0B4J2C4 111 aa8.54□□□□□ -1.04
COL18A1-205ENST00000423214 IGFL1Q6UW32 110 aa8.54□□□□□ -1.04
COL18A1-205ENST00000423214 CEND1Q8N111 149 aa8.54□□□□□ -1.04
COL18A1-205ENST00000423214 Q6JHZ5 121 aa8.53□□□□□ -1.04
COL18A1-205ENST00000423214 CLEC2BQ92478 149 aa8.53□□□□□ -1.04
COL18A1-205ENST00000423214 SNHG12Q9BXW3 62 aa8.53□□□□□ -1.04
COL18A1-205ENST00000423214 FAM218AQ96MZ4 157 aa8.52□□□□□ -1.05
COL18A1-205ENST00000423214 TRBV7-7A0A0K0K1E9 115 aa8.5□□□□□ -1.05
COL18A1-205ENST00000423214 H3BUT2 72 aa8.5□□□□□ -1.05
COL18A1-205ENST00000423214 FXYD2P54710 66 aa8.5□□□□□ -1.05
COL18A1-205ENST00000423214 H0YGX0 51 aa8.49□□□□□ -1.05
COL18A1-205ENST00000423214 PPDPFLQ8WWR9 84 aa8.49□□□□□ -1.05
COL18A1-205ENST00000423214 PRO1854Q9UHT4 67 aa8.49□□□□□ -1.05
COL18A1-205ENST00000423214 TMEM238LA0A1B0GVL6 79 aa8.47□□□□□ -1.05
COL18A1-205ENST00000423214 A6NJY4 79 aa8.47□□□□□ -1.05
COL18A1-205ENST00000423214 SNCGO76070 127 aa8.47□□□□□ -1.05
COL18A1-205ENST00000423214 Q6Q795 121 aa8.47□□□□□ -1.05
COL18A1-205ENST00000423214 ATP11AUNQ6ZP68 121 aa8.47□□□□□ -1.05
COL18A1-205ENST00000423214 OBSCN-AS1Q96MR7 158 aa8.47□□□□□ -1.05
COL18A1-205ENST00000423214 Q75L30 129 aa8.44□□□□□ -1.06
COL18A1-205ENST00000423214 TRIAP1O43715 76 aa8.43□□□□□ -1.06
COL18A1-205ENST00000423214 NDUFV3P56181 108 aaKnown RBP8.43□□□□□ -1.06
COL18A1-205ENST00000423214 K7ERJ3 54 aa8.41□□□□□ -1.06
COL18A1-205ENST00000423214 LST1O00453 97 aa8.41□□□□□ -1.06
COL18A1-205ENST00000423214 FABP2P12104 132 aa8.41□□□□□ -1.06
COL18A1-205ENST00000423214 HSD52Q0P140 79 aa8.41□□□□□ -1.06
COL18A1-205ENST00000423214 A0A1B0GX51 115 aa8.39□□□□□ -1.07
COL18A1-205ENST00000423214 UQCR10Q9UDW1 63 aa8.39□□□□□ -1.07
COL18A1-205ENST00000423214 SS18L2Q9UHA2 77 aa8.39□□□□□ -1.07
COL18A1-205ENST00000423214 LOC105371267A0A1B0GV96 52 aa8.38□□□□□ -1.07
COL18A1-205ENST00000423214 H3BMG7 143 aa8.38□□□□□ -1.07
COL18A1-205ENST00000423214 PSMB2P49721 201 aa8.38□□□□□ -1.07
COL18A1-205ENST00000423214 Q96NJ1 140 aa8.38□□□□□ -1.07
COL18A1-205ENST00000423214 TEN1Q86WV5 123 aa8.36□□□□□ -1.07
COL18A1-205ENST00000423214 GHRHP01286 108 aa8.35□□□□□ -1.07
COL18A1-205ENST00000423214 A0A1B0GV72 72 aa8.34□□□□□ -1.07
COL18A1-205ENST00000423214 SMIM6P0DI80 62 aa8.34□□□□□ -1.07
COL18A1-205ENST00000423214 A0A087WSZ3 146 aa8.33□□□□□ -1.08
COL18A1-205ENST00000423214 DNAL4O96015 105 aa8.33□□□□□ -1.08
COL18A1-205ENST00000423214 ORMDL1Q9P0S3 153 aa8.32□□□□□ -1.08
COL18A1-205ENST00000423214 A0A1W2PNM2 257 aa8.31□□□□□ -1.08
COL18A1-205ENST00000423214 COX6CP09669 75 aa8.31□□□□□ -1.08
COL18A1-205ENST00000423214 C20orf166-AS1Q96NR2 134 aa8.31□□□□□ -1.08
COL18A1-205ENST00000423214 TRBV20-1A0A075B6N2 111 aa8.3□□□□□ -1.08
COL18A1-205ENST00000423214 A8MUU9 505 aa8.28□□□□□ -1.08
COL18A1-205ENST00000423214 ANKRD29Q8N6D5 301 aa8.28□□□□□ -1.08
COL18A1-205ENST00000423214 TMEM256-PLSCR3K7ERE1 68 aa8.26□□□□□ -1.09
COL18A1-205ENST00000423214 SCGB1C2P0DMR2 95 aa8.26□□□□□ -1.09
COL18A1-205ENST00000423214 SIGMAR1Q99720 223 aa8.26□□□□□ -1.09
COL18A1-205ENST00000423214 H3BQ85 93 aa8.24□□□□□ -1.09
COL18A1-205ENST00000423214 DSCR10P59022 87 aa8.23□□□□□ -1.09
COL18A1-205ENST00000423214 TRBV7-4A0A0J9YYF1 115 aa8.21□□□□□ -1.1
COL18A1-205ENST00000423214 FAM236DA0A1B0GTK5 79 aa8.21□□□□□ -1.1
COL18A1-205ENST00000423214 TRACP01848 142 aa8.21□□□□□ -1.1
COL18A1-205ENST00000423214 FAM236CP0DP71 79 aa8.21□□□□□ -1.1
COL18A1-205ENST00000423214 CCKP06307 115 aa8.2□□□□□ -1.1
COL18A1-205ENST00000423214 UBE2V1Q13404 147 aa8.2□□□□□ -1.1
COL18A1-205ENST00000423214 DEFB116Q30KQ4 102 aa8.2□□□□□ -1.1
COL18A1-205ENST00000423214 KRTAP9-8Q9BYQ0 159 aa8.2□□□□□ -1.1
COL18A1-205ENST00000423214 TSTD3H0UI37 97 aa8.19□□□□□ -1.1
COL18A1-205ENST00000423214 IGKV4-1P06312 121 aa8.19□□□□□ -1.1
COL18A1-205ENST00000423214 NAA38Q9BRA0 125 aaKnown RBP8.17□□□□□ -1.1
COL18A1-205ENST00000423214 VPS25Q9BRG1 176 aa8.17□□□□□ -1.1
COL18A1-205ENST00000423214 M0R143 59 aa8.16□□□□□ -1.1
COL18A1-205ENST00000423214 BAALC-AS2P0C853 105 aa8.16□□□□□ -1.1
COL18A1-205ENST00000423214 LINC00313P59037 77 aa8.16□□□□□ -1.1
COL18A1-205ENST00000423214 USH2AO75445 5202 aa8.15□□□□□ -1.1
COL18A1-205ENST00000423214 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.15□□□□□ -1.1
COL18A1-205ENST00000423214 RBM3P98179 157 aaKnown RBP8.15□□□□□ -1.1
COL18A1-205ENST00000423214 BATFQ16520 125 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms