RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 SEC61BP60468 96 aaKnown RBP12.14□□□□□ -0.47
TRAF4-204ENST00000422344 A0A0G2JQZ4 141 aa12.13□□□□□ -0.47
TRAF4-204ENST00000422344 CFC1BP0CG36 223 aa12.13□□□□□ -0.47
TRAF4-204ENST00000422344 CFC1P0CG37 223 aa12.13□□□□□ -0.47
TRAF4-204ENST00000422344 ASB16-AS1Q495Z4 193 aa12.13□□□□□ -0.47
TRAF4-204ENST00000422344 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.12□□□□□ -0.47
TRAF4-204ENST00000422344 C2orf91Q6ZV80 131 aa12.12□□□□□ -0.47
TRAF4-204ENST00000422344 Q5XG85 94 aa12.11□□□□□ -0.47
TRAF4-204ENST00000422344 A0A0B4J2C4 111 aa12.1□□□□□ -0.47
TRAF4-204ENST00000422344 SNCGO76070 127 aa12.09□□□□□ -0.47
TRAF4-204ENST00000422344 XP32Q5T750 250 aa12.08□□□□□ -0.48
TRAF4-204ENST00000422344 TMEM238LA0A1B0GVL6 79 aa12.07□□□□□ -0.48
TRAF4-204ENST00000422344 A6NJY4 79 aa12.07□□□□□ -0.48
TRAF4-204ENST00000422344 Q6JHZ5 121 aa12.07□□□□□ -0.48
TRAF4-204ENST00000422344 CEND1Q8N111 149 aa12.07□□□□□ -0.48
TRAF4-204ENST00000422344 PPDPFLQ8WWR9 84 aa12.07□□□□□ -0.48
TRAF4-204ENST00000422344 TCL1BO95988 128 aa12.06□□□□□ -0.48
TRAF4-204ENST00000422344 SNHG12Q9BXW3 62 aa12.06□□□□□ -0.48
TRAF4-204ENST00000422344 C9orf92A6NGG3 77 aa12.04□□□□□ -0.48
TRAF4-204ENST00000422344 H0YGX0 51 aa12.04□□□□□ -0.48
TRAF4-204ENST00000422344 OCIAD2Q56VL3 154 aa12.04□□□□□ -0.48
TRAF4-204ENST00000422344 C1orf195Q5TG92 126 aa12.03□□□□□ -0.48
TRAF4-204ENST00000422344 CLEC2BQ92478 149 aa12.03□□□□□ -0.48
TRAF4-204ENST00000422344 TMA7Q9Y2S6 64 aaKnown RBP12.03□□□□□ -0.48
TRAF4-204ENST00000422344 IGLV8-61A0A075B6I0 122 aa12.02□□□□□ -0.49
TRAF4-204ENST00000422344 PYY3Q5JQD4 70 aa12.02□□□□□ -0.49
TRAF4-204ENST00000422344 PRO1854Q9UHT4 67 aa12.02□□□□□ -0.49
TRAF4-204ENST00000422344 IGFL1Q6UW32 110 aa12□□□□□ -0.49
TRAF4-204ENST00000422344 FXYD2P54710 66 aa11.98□□□□□ -0.49
TRAF4-204ENST00000422344 TRBV7-7A0A0K0K1E9 115 aa11.96□□□□□ -0.49
TRAF4-204ENST00000422344 HSD52Q0P140 79 aa11.95□□□□□ -0.5
TRAF4-204ENST00000422344 FAM218AQ96MZ4 157 aa11.95□□□□□ -0.5
TRAF4-204ENST00000422344 H3BUT2 72 aa11.94□□□□□ -0.5
TRAF4-204ENST00000422344 GHRHP01286 108 aa11.93□□□□□ -0.5
TRAF4-204ENST00000422344 KRTAP4-1Q9BYQ7 146 aa11.93□□□□□ -0.5
TRAF4-204ENST00000422344 A0A1B0GX51 115 aa11.92□□□□□ -0.5
TRAF4-204ENST00000422344 LCE2DQ5TA82 110 aaPredicted RBP11.92□□□□□ -0.5
TRAF4-204ENST00000422344 TRIAP1O43715 76 aa11.89□□□□□ -0.51
TRAF4-204ENST00000422344 NDUFV3P56181 108 aaKnown RBP11.89□□□□□ -0.51
TRAF4-204ENST00000422344 UQCR10Q9UDW1 63 aa11.89□□□□□ -0.51
TRAF4-204ENST00000422344 PCOTHQ58A44 107 aa11.88□□□□□ -0.51
TRAF4-204ENST00000422344 FABP2P12104 132 aa11.87□□□□□ -0.51
TRAF4-204ENST00000422344 PSMB2P49721 201 aa11.87□□□□□ -0.51
TRAF4-204ENST00000422344 K7ERJ3 54 aa11.86□□□□□ -0.51
TRAF4-204ENST00000422344 FSIP2Q5CZC0 6907 aa11.85□□□□□ -0.51
TRAF4-204ENST00000422344 DNAL4O96015 105 aa11.83□□□□□ -0.52
TRAF4-204ENST00000422344 COX6CP09669 75 aa11.83□□□□□ -0.52
TRAF4-204ENST00000422344 CRCT1Q9UGL9 99 aa11.83□□□□□ -0.52
TRAF4-204ENST00000422344 H3BMG7 143 aa11.82□□□□□ -0.52
TRAF4-204ENST00000422344 LST1O00453 97 aa11.82□□□□□ -0.52
TRAF4-204ENST00000422344 SS18L2Q9UHA2 77 aa11.82□□□□□ -0.52
TRAF4-204ENST00000422344 TEN1Q86WV5 123 aa11.81□□□□□ -0.52
TRAF4-204ENST00000422344 Q6Q795 121 aa11.8□□□□□ -0.52
TRAF4-204ENST00000422344 RPL37P61927 97 aaKnown RBP11.79□□□□□ -0.52
TRAF4-204ENST00000422344 ORMDL1Q9P0S3 153 aa11.78□□□□□ -0.52
TRAF4-204ENST00000422344 H3BQ85 93 aa11.77□□□□□ -0.53
TRAF4-204ENST00000422344 A0A087WSZ3 146 aa11.74□□□□□ -0.53
TRAF4-204ENST00000422344 OBSCN-AS1Q96MR7 158 aa11.72□□□□□ -0.53
TRAF4-204ENST00000422344 TMEM256-PLSCR3K7ERE1 68 aa11.71□□□□□ -0.53
TRAF4-204ENST00000422344 A0A1B0GV72 72 aa11.7□□□□□ -0.54
TRAF4-204ENST00000422344 SCGB1C2P0DMR2 95 aa11.7□□□□□ -0.54
TRAF4-204ENST00000422344 ANKRD29Q8N6D5 301 aa11.7□□□□□ -0.54
TRAF4-204ENST00000422344 LCE2CQ5TA81 110 aa11.69□□□□□ -0.54
TRAF4-204ENST00000422344 A0A1W2PNM2 257 aa11.66□□□□□ -0.54
TRAF4-204ENST00000422344 TRACP01848 142 aa11.65□□□□□ -0.54
TRAF4-204ENST00000422344 Q96NJ1 140 aa11.63□□□□□ -0.55
TRAF4-204ENST00000422344 TRBV7-4A0A0J9YYF1 115 aa11.62□□□□□ -0.55
TRAF4-204ENST00000422344 M0R143 59 aa11.62□□□□□ -0.55
TRAF4-204ENST00000422344 UBE2V1Q13404 147 aa11.62□□□□□ -0.55
TRAF4-204ENST00000422344 ATP11AUNQ6ZP68 121 aa11.62□□□□□ -0.55
TRAF4-204ENST00000422344 KRTAP19-2Q3LHN2 52 aa11.61□□□□□ -0.55
TRAF4-204ENST00000422344 Q75L30 129 aa11.61□□□□□ -0.55
TRAF4-204ENST00000422344 MT1HP80294 61 aa11.59□□□□□ -0.55
TRAF4-204ENST00000422344 SIGMAR1Q99720 223 aa11.59□□□□□ -0.55
TRAF4-204ENST00000422344 CCKP06307 115 aa11.58□□□□□ -0.56
TRAF4-204ENST00000422344 SMIM6P0DI80 62 aa11.58□□□□□ -0.56
TRAF4-204ENST00000422344 IGKV4-1P06312 121 aa11.53□□□□□ -0.56
TRAF4-204ENST00000422344 RBM3P98179 157 aaKnown RBP11.53□□□□□ -0.56
TRAF4-204ENST00000422344 VPS25Q9BRG1 176 aa11.53□□□□□ -0.56
TRAF4-204ENST00000422344 COX6B2Q6YFQ2 88 aa11.52□□□□□ -0.57
TRAF4-204ENST00000422344 DSCR8Q96T75 97 aa11.52□□□□□ -0.57
TRAF4-204ENST00000422344 BAALC-AS2P0C853 105 aa11.51□□□□□ -0.57
TRAF4-204ENST00000422344 DSCR10P59022 87 aa11.51□□□□□ -0.57
TRAF4-204ENST00000422344 ATXN8Q156A1 80 aa11.49□□□□□ -0.57
TRAF4-204ENST00000422344 C20orf166-AS1Q96NR2 134 aa11.49□□□□□ -0.57
TRAF4-204ENST00000422344 NAA38Q9BRA0 125 aaKnown RBP11.48□□□□□ -0.57
TRAF4-204ENST00000422344 A8MUU9 505 aa11.47□□□□□ -0.57
TRAF4-204ENST00000422344 TSTD3H0UI37 97 aa11.46□□□□□ -0.57
TRAF4-204ENST00000422344 LINC00313P59037 77 aa11.46□□□□□ -0.57
TRAF4-204ENST00000422344 LORP23490 312 aaPredicted RBP11.45□□□□□ -0.58
TRAF4-204ENST00000422344 DEFB116Q30KQ4 102 aa11.45□□□□□ -0.58
TRAF4-204ENST00000422344 LINC00472Q9H8W2 130 aa11.45□□□□□ -0.58
TRAF4-204ENST00000422344 C9JAW5 83 aa11.44□□□□□ -0.58
TRAF4-204ENST00000422344 KRTAP10-6P60371 365 aaPredicted RBP11.44□□□□□ -0.58
TRAF4-204ENST00000422344 LYRM7Q5U5X0 104 aa11.42□□□□□ -0.58
TRAF4-204ENST00000422344 C21orf62-AS1Q17RA5 79 aa11.41□□□□□ -0.58
TRAF4-204ENST00000422344 BATFQ16520 125 aa11.4□□□□□ -0.58
TRAF4-204ENST00000422344 IGHV6-1A0A0B4J1U7 121 aa11.38□□□□□ -0.59
TRAF4-204ENST00000422344 JMJD7-PLA2G4BH0Y9G9 81 aa11.38□□□□□ -0.59
TRAF4-204ENST00000422344 M0R2T5 61 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms