RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 FUSP35637 526 aaKnown RBP eCLIP11.58□□□□□ -0.56
PPFIA3-202ENST00000421230 C14orf177Q52M58 125 aa11.58□□□□□ -0.56
PPFIA3-202ENST00000421230 HIGD2AQ9BW72 106 aa11.57□□□□□ -0.56
PPFIA3-202ENST00000421230 DEFB105AQ8NG35 78 aa11.56□□□□□ -0.56
PPFIA3-202ENST00000421230 FRAS1Q86XX4 4008 aa11.56□□□□□ -0.56
PPFIA3-202ENST00000421230 A0A087WTM6 91 aa11.55□□□□□ -0.56
PPFIA3-202ENST00000421230 C7orf33Q8WU49 177 aa11.55□□□□□ -0.56
PPFIA3-202ENST00000421230 LCE6AA0A183 80 aa11.55□□□□□ -0.56
PPFIA3-202ENST00000421230 CNBPP62633 177 aaKnown RBP11.54□□□□□ -0.56
PPFIA3-202ENST00000421230 SERTAD4-AS1Q5TG53 156 aa11.54□□□□□ -0.56
PPFIA3-202ENST00000421230 A0A1W2PNM2 257 aa11.54□□□□□ -0.56
PPFIA3-202ENST00000421230 NKAPP1Q8N9T2 125 aa11.54□□□□□ -0.56
PPFIA3-202ENST00000421230 TNP2Q05952 138 aa11.52□□□□□ -0.56
PPFIA3-202ENST00000421230 SMIM29Q86T20 159 aa11.52□□□□□ -0.56
PPFIA3-202ENST00000421230 DHRS4-AS1Q9P1J3 65 aa11.52□□□□□ -0.57
PPFIA3-202ENST00000421230 BRK1Q8WUW1 75 aa11.51□□□□□ -0.57
PPFIA3-202ENST00000421230 HECTD4Q9Y4D8 3996 aa11.51□□□□□ -0.57
PPFIA3-202ENST00000421230 TLX1NBP0CAT3 122 aa11.51□□□□□ -0.57
PPFIA3-202ENST00000421230 KRTAP4-16G5E9R7 235 aaPredicted RBP11.5□□□□□ -0.57
PPFIA3-202ENST00000421230 RTL8CO15255 209 aa11.5□□□□□ -0.57
PPFIA3-202ENST00000421230 Q6ZRX8 168 aa11.5□□□□□ -0.57
PPFIA3-202ENST00000421230 KMT2CQ8NEZ4 4911 aaKnown RBP11.5□□□□□ -0.57
PPFIA3-202ENST00000421230 FAM30AQ9NZY2 134 aa11.5□□□□□ -0.57
PPFIA3-202ENST00000421230 PLA2G2DQ9UNK4 145 aa11.5□□□□□ -0.57
PPFIA3-202ENST00000421230 Q9BRP9 147 aa11.49□□□□□ -0.57
PPFIA3-202ENST00000421230 MPLKIPQ8TAP9 179 aa11.48□□□□□ -0.57
PPFIA3-202ENST00000421230 C1orf137Q5JT78 98 aa11.47□□□□□ -0.57
PPFIA3-202ENST00000421230 Q8NBF4 154 aa11.47□□□□□ -0.57
PPFIA3-202ENST00000421230 SPRR1AP35321 89 aa11.47□□□□□ -0.57
PPFIA3-202ENST00000421230 SPRR4Q96PI1 79 aa11.47□□□□□ -0.57
PPFIA3-202ENST00000421230 FAT2Q9NYQ8 4349 aa11.46□□□□□ -0.57
PPFIA3-202ENST00000421230 DNAH11Q96DT5 4516 aa11.46□□□□□ -0.58
PPFIA3-202ENST00000421230 PMAIP1Q13794 54 aa11.45□□□□□ -0.58
PPFIA3-202ENST00000421230 C9orf163Q8N9P6 203 aa11.45□□□□□ -0.58
PPFIA3-202ENST00000421230 ZCCHC13Q8WW36 166 aaKnown RBP11.45□□□□□ -0.58
PPFIA3-202ENST00000421230 IGLV1-50A0A075B6I6 118 aa11.44□□□□□ -0.58
PPFIA3-202ENST00000421230 IGLV5-37A0A075B6J1 123 aa11.44□□□□□ -0.58
PPFIA3-202ENST00000421230 A0A096LNI7 61 aa11.44□□□□□ -0.58
PPFIA3-202ENST00000421230 IGKV2-24A0A0C4DH68 120 aa11.44□□□□□ -0.58
PPFIA3-202ENST00000421230 DSCR10P59022 87 aa11.44□□□□□ -0.58
PPFIA3-202ENST00000421230 RYR2Q92736 4967 aa11.44□□□□□ -0.58
PPFIA3-202ENST00000421230 hDV103S1A0JD37 113 aa11.44□□□□□ -0.58
PPFIA3-202ENST00000421230 FAM168BA1KXE4 195 aa11.44□□□□□ -0.58
PPFIA3-202ENST00000421230 ST20-AS1Q8NBB2 130 aa11.43□□□□□ -0.58
PPFIA3-202ENST00000421230 RPL37AP8A6NKH3 93 aa11.43□□□□□ -0.58
PPFIA3-202ENST00000421230 CD164Q04900 197 aa11.42□□□□□ -0.58
PPFIA3-202ENST00000421230 ETDCA0A1B0GVM5 59 aa11.41□□□□□ -0.58
PPFIA3-202ENST00000421230 CHTF8P0CG12 524 aa11.41□□□□□ -0.58
PPFIA3-202ENST00000421230 C16orf90A8MZG2 172 aa11.4□□□□□ -0.58
PPFIA3-202ENST00000421230 DNAH5Q8TE73 4624 aa11.39□□□□□ -0.59
PPFIA3-202ENST00000421230 KRTAP7-1Q8IUC3 87 aa11.39□□□□□ -0.59
PPFIA3-202ENST00000421230 PKD1P98161 4303 aa11.38□□□□□ -0.59
PPFIA3-202ENST00000421230 IGLV5-52A0A0A0MRZ9 124 aa11.38□□□□□ -0.59
PPFIA3-202ENST00000421230 K7EQZ3 153 aa11.38□□□□□ -0.59
PPFIA3-202ENST00000421230 PRR15Q8IV56 129 aa11.37□□□□□ -0.59
PPFIA3-202ENST00000421230 KRTAP10-2P60368 255 aa11.37□□□□□ -0.59
PPFIA3-202ENST00000421230 PANO1I0J062 215 aa11.36□□□□□ -0.59
PPFIA3-202ENST00000421230 C1orf64Q8NEQ6 169 aa11.36□□□□□ -0.59
PPFIA3-202ENST00000421230 A0A1W2PNN7 141 aa11.35□□□□□ -0.59
PPFIA3-202ENST00000421230 Q1T7F1 81 aa11.34□□□□□ -0.59
PPFIA3-202ENST00000421230 HCG22E2RYF7 251 aa11.32□□□□□ -0.6
PPFIA3-202ENST00000421230 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.32□□□□□ -0.6
PPFIA3-202ENST00000421230 CYP4F30PQ9H0H9 118 aa11.32□□□□□ -0.6
PPFIA3-202ENST00000421230 MRPL55Q7Z7F7 128 aaKnown RBP11.31□□□□□ -0.6
PPFIA3-202ENST00000421230 UBE2BP63146 152 aa11.29□□□□□ -0.6
PPFIA3-202ENST00000421230 RYR3Q15413 4870 aa11.28□□□□□ -0.6
PPFIA3-202ENST00000421230 SPACA4Q8TDM5 124 aa11.28□□□□□ -0.6
PPFIA3-202ENST00000421230 REG3GQ6UW15 175 aa11.25□□□□□ -0.61
PPFIA3-202ENST00000421230 DNAH8Q96JB1 4490 aa11.25□□□□□ -0.61
PPFIA3-202ENST00000421230 IGFL1Q6UW32 110 aa11.25□□□□□ -0.61
PPFIA3-202ENST00000421230 PHF5AQ7RTV0 110 aaKnown RBP11.24□□□□□ -0.61
PPFIA3-202ENST00000421230 PKHD1P08F94 4074 aa11.23□□□□□ -0.61
PPFIA3-202ENST00000421230 A0A0G2JQZ4 141 aa11.23□□□□□ -0.61
PPFIA3-202ENST00000421230 NDUFB1O75438 58 aa11.23□□□□□ -0.61
PPFIA3-202ENST00000421230 IGLV8-61A0A075B6I0 122 aa11.22□□□□□ -0.61
PPFIA3-202ENST00000421230 KRTAP10-1P60331 282 aa11.2□□□□□ -0.62
PPFIA3-202ENST00000421230 KRTAP11-1Q8IUC1 163 aa11.19□□□□□ -0.62
PPFIA3-202ENST00000421230 TRAV22A0A0B4J277 110 aa11.19□□□□□ -0.62
PPFIA3-202ENST00000421230 PRR4Q16378 134 aa11.19□□□□□ -0.62
PPFIA3-202ENST00000421230 DEFB116Q30KQ4 102 aa11.19□□□□□ -0.62
PPFIA3-202ENST00000421230 KRTAP29-1A8MX34 341 aaPredicted RBP11.18□□□□□ -0.62
PPFIA3-202ENST00000421230 MP68P56378 58 aa11.17□□□□□ -0.62
PPFIA3-202ENST00000421230 WFDC13Q8IUB5 93 aa11.17□□□□□ -0.62
PPFIA3-202ENST00000421230 A0A087WSZ3 146 aa11.16□□□□□ -0.62
PPFIA3-202ENST00000421230 A0A1B0GVY2 172 aa11.16□□□□□ -0.62
PPFIA3-202ENST00000421230 PLAC8Q9NZF1 115 aa11.16□□□□□ -0.62
PPFIA3-202ENST00000421230 C4orf48Q5BLP8 95 aa11.15□□□□□ -0.62
PPFIA3-202ENST00000421230 PSPHP1O15172 72 aa11.15□□□□□ -0.63
PPFIA3-202ENST00000421230 DYNC1H1Q14204 4646 aaKnown RBP11.14□□□□□ -0.63
PPFIA3-202ENST00000421230 LRP1BQ9NZR2 4599 aa11.14□□□□□ -0.63
PPFIA3-202ENST00000421230 LINC00208Q96KT6 92 aa11.12□□□□□ -0.63
PPFIA3-202ENST00000421230 RPL37AP61513 92 aaKnown RBP11.12□□□□□ -0.63
PPFIA3-202ENST00000421230 PRLHP81277 87 aa11.12□□□□□ -0.63
PPFIA3-202ENST00000421230 SPANXA2-OT1Q8N9U9 137 aa11.11□□□□□ -0.63
PPFIA3-202ENST00000421230 CIRBP-AS1Q8TBR5 109 aa11.11□□□□□ -0.63
PPFIA3-202ENST00000421230 H3BPC8 53 aa11.11□□□□□ -0.63
PPFIA3-202ENST00000421230 Q6ZSA8 131 aa11.11□□□□□ -0.63
PPFIA3-202ENST00000421230 H0Y9P7 68 aa11.07□□□□□ -0.64
PPFIA3-202ENST00000421230 CASC2Q6XLA1 102 aa11.07□□□□□ -0.64
PPFIA3-202ENST00000421230 A8MUN3 132 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms