RNA–Protein interactions for RNA: ENST00000420222.1

SH3PXD2A-204, Transcript of SH3 and PX domains 2A, humanhuman

TSL 2

Gene SH3PXD2A, Length 3,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-204ENST00000420222 COL7A1Q02388 2944 aa9.5□□□□□ -0.89
SH3PXD2A-204ENST00000420222 SPTSSBQ8NFR3 76 aa9.5□□□□□ -0.89
SH3PXD2A-204ENST00000420222 ANK2Q01484 3957 aa9.49□□□□□ -0.89
SH3PXD2A-204ENST00000420222 F8WDY8 70 aa9.49□□□□□ -0.89
SH3PXD2A-204ENST00000420222 KRTAP10-11P60412 298 aa9.49□□□□□ -0.89
SH3PXD2A-204ENST00000420222 PMAIP1Q13794 54 aa9.49□□□□□ -0.89
SH3PXD2A-204ENST00000420222 H0Y9P7 68 aa9.48□□□□□ -0.89
SH3PXD2A-204ENST00000420222 Q1T7F1 81 aa9.48□□□□□ -0.89
SH3PXD2A-204ENST00000420222 CHKB-CPT1BH3BT56 60 aa9.48□□□□□ -0.89
SH3PXD2A-204ENST00000420222 B9D2Q9BPU9 175 aa9.48□□□□□ -0.89
SH3PXD2A-204ENST00000420222 UBE2AP49459 152 aa9.47□□□□□ -0.89
SH3PXD2A-204ENST00000420222 H0Y9J4 135 aa9.46□□□□□ -0.89
SH3PXD2A-204ENST00000420222 PRR15LQ9BU68 103 aa9.46□□□□□ -0.89
SH3PXD2A-204ENST00000420222 LCE6AA0A183 80 aa9.46□□□□□ -0.89
SH3PXD2A-204ENST00000420222 CASC2Q6XLA1 102 aa9.46□□□□□ -0.9
SH3PXD2A-204ENST00000420222 SPRR1AP35321 89 aa9.45□□□□□ -0.9
SH3PXD2A-204ENST00000420222 PRR15Q8IV56 129 aa9.45□□□□□ -0.9
SH3PXD2A-204ENST00000420222 LINC00588Q9Y4M8 146 aa9.45□□□□□ -0.9
SH3PXD2A-204ENST00000420222 KMT2BQ9UMN6 2715 aaPredicted RBP9.44□□□□□ -0.9
SH3PXD2A-204ENST00000420222 H3BNG1 76 aa9.44□□□□□ -0.9
SH3PXD2A-204ENST00000420222 NDUFB1O75438 58 aa9.43□□□□□ -0.9
SH3PXD2A-204ENST00000420222 PCOTHQ58A44 107 aa9.43□□□□□ -0.9
SH3PXD2A-204ENST00000420222 TENM2Q9NT68 2774 aa9.42□□□□□ -0.9
SH3PXD2A-204ENST00000420222 A0A1B0GW54 56 aa9.41□□□□□ -0.9
SH3PXD2A-204ENST00000420222 CHTF8P0CG12 524 aa9.41□□□□□ -0.9
SH3PXD2A-204ENST00000420222 DNAH10OSP0CZ25 163 aa9.41□□□□□ -0.9
SH3PXD2A-204ENST00000420222 TLX1NBP0CAT3 122 aa9.4□□□□□ -0.9
SH3PXD2A-204ENST00000420222 CYP4F30PQ9H0H9 118 aa9.39□□□□□ -0.91
SH3PXD2A-204ENST00000420222 Q5VV11 94 aa9.38□□□□□ -0.91
SH3PXD2A-204ENST00000420222 J3QKU1 62 aa9.38□□□□□ -0.91
SH3PXD2A-204ENST00000420222 PLA2G2DQ9UNK4 145 aa9.38□□□□□ -0.91
SH3PXD2A-204ENST00000420222 PHF5AQ7RTV0 110 aaKnown RBP9.37□□□□□ -0.91
SH3PXD2A-204ENST00000420222 A6NED7 52 aa9.36□□□□□ -0.91
SH3PXD2A-204ENST00000420222 IGLV5-37A0A075B6J1 123 aa9.35□□□□□ -0.91
SH3PXD2A-204ENST00000420222 NDUFS5O43920 106 aa9.35□□□□□ -0.91
SH3PXD2A-204ENST00000420222 CNBPP62633 177 aaKnown RBP9.35□□□□□ -0.91
SH3PXD2A-204ENST00000420222 STAB2Q8WWQ8 2551 aa9.35□□□□□ -0.91
SH3PXD2A-204ENST00000420222 LYSTQ99698 3801 aa9.33□□□□□ -0.92
SH3PXD2A-204ENST00000420222 DNAH10Q8IVF4 4471 aa9.33□□□□□ -0.92
SH3PXD2A-204ENST00000420222 KRTAP11-1Q8IUC1 163 aa9.32□□□□□ -0.92
SH3PXD2A-204ENST00000420222 Q8N9P0 234 aaPredicted RBP9.32□□□□□ -0.92
SH3PXD2A-204ENST00000420222 MGAM2Q2M2H8 2515 aa9.32□□□□□ -0.92
SH3PXD2A-204ENST00000420222 IGLV9-49A0A0B4J1Y8 123 aa9.32□□□□□ -0.92
SH3PXD2A-204ENST00000420222 SPAG11AQ6PDA7 123 aa9.3□□□□□ -0.92
SH3PXD2A-204ENST00000420222 COA5Q86WW8 74 aa9.3□□□□□ -0.92
SH3PXD2A-204ENST00000420222 C16orf90A8MZG2 172 aa9.3□□□□□ -0.92
SH3PXD2A-204ENST00000420222 KRTAP29-1A8MX34 341 aaPredicted RBP9.29□□□□□ -0.92
SH3PXD2A-204ENST00000420222 A8MWP4 228 aa9.28□□□□□ -0.92
SH3PXD2A-204ENST00000420222 LIMD2Q9BT23 127 aa9.26□□□□□ -0.93
SH3PXD2A-204ENST00000420222 KRTAP1-5Q9BYS1 174 aa9.25□□□□□ -0.93
SH3PXD2A-204ENST00000420222 UBE2DNLQ8IWF7 75 aa9.24□□□□□ -0.93
SH3PXD2A-204ENST00000420222 IGHV6-1A0A0B4J1U7 121 aa9.23□□□□□ -0.93
SH3PXD2A-204ENST00000420222 LCA10Q71F78 164 aa9.22□□□□□ -0.93
SH3PXD2A-204ENST00000420222 LINC00472Q9H8W2 130 aa9.22□□□□□ -0.93
SH3PXD2A-204ENST00000420222 SPANXA2-OT1Q8N9U9 137 aa9.21□□□□□ -0.94
SH3PXD2A-204ENST00000420222 MMP24-AS1A0A0U1RRL7 71 aa9.2□□□□□ -0.94
SH3PXD2A-204ENST00000420222 CD164Q04900 197 aa9.19□□□□□ -0.94
SH3PXD2A-204ENST00000420222 C9orf163Q8N9P6 203 aa9.19□□□□□ -0.94
SH3PXD2A-204ENST00000420222 IGLV8-61A0A075B6I0 122 aa9.18□□□□□ -0.94
SH3PXD2A-204ENST00000420222 ANAPC11Q9NYG5 84 aa9.16□□□□□ -0.94
SH3PXD2A-204ENST00000420222 H3BPC8 53 aa9.16□□□□□ -0.94
SH3PXD2A-204ENST00000420222 SPINK6Q6UWN8 80 aa9.16□□□□□ -0.94
SH3PXD2A-204ENST00000420222 KRTAP24-1Q3LI83 254 aa9.14□□□□□ -0.95
SH3PXD2A-204ENST00000420222 PANO1I0J062 215 aa9.14□□□□□ -0.95
SH3PXD2A-204ENST00000420222 CDK2AP2O75956 126 aa9.14□□□□□ -0.95
SH3PXD2A-204ENST00000420222 KTN1-AS1Q86SY8 53 aa9.13□□□□□ -0.95
SH3PXD2A-204ENST00000420222 IGLV7-46A0A075B6I9 117 aa9.12□□□□□ -0.95
SH3PXD2A-204ENST00000420222 LOC101927531A0A1B0GV80 90 aa9.12□□□□□ -0.95
SH3PXD2A-204ENST00000420222 Q75L30 129 aa9.11□□□□□ -0.95
SH3PXD2A-204ENST00000420222 RBM12B-AS1Q9P1G2 102 aa9.11□□□□□ -0.95
SH3PXD2A-204ENST00000420222 K7EIL1 84 aa9.11□□□□□ -0.95
SH3PXD2A-204ENST00000420222 SPINK7P58062 85 aa9.11□□□□□ -0.95
SH3PXD2A-204ENST00000420222 C8orf17Q9NRJ1 99 aa9.09□□□□□ -0.95
SH3PXD2A-204ENST00000420222 ATP11AUNQ6ZP68 121 aa9.08□□□□□ -0.96
SH3PXD2A-204ENST00000420222 PRR26Q8N8Z3 221 aa9.08□□□□□ -0.96
SH3PXD2A-204ENST00000420222 MOBPQ13875 183 aa9.08□□□□□ -0.96
SH3PXD2A-204ENST00000420222 DNAH9Q9NYC9 4486 aa9.08□□□□□ -0.96
SH3PXD2A-204ENST00000420222 A0A087X002 238 aa9.07□□□□□ -0.96
SH3PXD2A-204ENST00000420222 NOTCH2NLQ7Z3S9 236 aa9.07□□□□□ -0.96
SH3PXD2A-204ENST00000420222 RETNLBQ9BQ08 111 aa9.07□□□□□ -0.96
SH3PXD2A-204ENST00000420222 DNAH1Q9P2D7 4330 aa9.06□□□□□ -0.96
SH3PXD2A-204ENST00000420222 HRES1P13985 223 aa9.06□□□□□ -0.96
SH3PXD2A-204ENST00000420222 CDC42SE1Q9NRR8 79 aa9.04□□□□□ -0.96
SH3PXD2A-204ENST00000420222 SPRR1BP22528 89 aa9.03□□□□□ -0.96
SH3PXD2A-204ENST00000420222 Q96NJ1 140 aa9.03□□□□□ -0.96
SH3PXD2A-204ENST00000420222 CMYA5Q8N3K9 4069 aa9.02□□□□□ -0.97
SH3PXD2A-204ENST00000420222 TP53AIP1Q9HCN2 124 aa9.01□□□□□ -0.97
SH3PXD2A-204ENST00000420222 A0A1B0GVX0 72 aa9□□□□□ -0.97
SH3PXD2A-204ENST00000420222 A6NN06 94 aa9□□□□□ -0.97
SH3PXD2A-204ENST00000420222 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9□□□□□ -0.97
SH3PXD2A-204ENST00000420222 HUWE1Q7Z6Z7 4374 aaKnown RBP9□□□□□ -0.97
SH3PXD2A-204ENST00000420222 C14orf177Q52M58 125 aa8.99□□□□□ -0.97
SH3PXD2A-204ENST00000420222 MRPL34Q9BQ48 92 aaKnown RBP8.99□□□□□ -0.97
SH3PXD2A-204ENST00000420222 LINC01558Q9Y6Z2 57 aa8.99□□□□□ -0.97
SH3PXD2A-204ENST00000420222 DNAH7Q8WXX0 4024 aa8.98□□□□□ -0.97
SH3PXD2A-204ENST00000420222 PRAC1Q96KF2 57 aa8.95□□□□□ -0.98
SH3PXD2A-204ENST00000420222 CIRBP-AS1Q8TBR5 109 aa8.95□□□□□ -0.98
SH3PXD2A-204ENST00000420222 Q5W150 140 aa8.94□□□□□ -0.98
SH3PXD2A-204ENST00000420222 C7orf65Q6ZTY9 151 aa8.94□□□□□ -0.98
SH3PXD2A-204ENST00000420222 Q6ZR54 194 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms