RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 SMIM20Q8N5G0 67 aa6.16□□□□□ -1.42
SSBP3-206ENST00000420121 KRTAP4-1Q9BYQ7 146 aa6.16□□□□□ -1.42
SSBP3-206ENST00000420121 ASB16-AS1Q495Z4 193 aa6.15□□□□□ -1.42
SSBP3-206ENST00000420121 SIGMAR1Q99720 223 aa6.15□□□□□ -1.42
SSBP3-206ENST00000420121 OR13C6PQ8NH95 151 aa6.14□□□□□ -1.43
SSBP3-206ENST00000420121 SPANXDQ9BXN6 97 aa6.14□□□□□ -1.43
SSBP3-206ENST00000420121 SLC25A20O43772 301 aa6.13□□□□□ -1.43
SSBP3-206ENST00000420121 ELOF1P60002 83 aaKnown RBP6.13□□□□□ -1.43
SSBP3-206ENST00000420121 C9orf153Q5TBE3 101 aa6.13□□□□□ -1.43
SSBP3-206ENST00000420121 KRTDAPP60985 99 aa6.12□□□□□ -1.43
SSBP3-206ENST00000420121 HINT1P49773 126 aaPredicted RBP6.11□□□□□ -1.43
SSBP3-206ENST00000420121 C6orf99Q4VX62 202 aa6.11□□□□□ -1.43
SSBP3-206ENST00000420121 DHRS4-AS1Q9P1J3 65 aa6.11□□□□□ -1.43
SSBP3-206ENST00000420121 COX7BP24311 80 aa6.1□□□□□ -1.43
SSBP3-206ENST00000420121 ATOH7Q8N100 152 aa6.1□□□□□ -1.43
SSBP3-206ENST00000420121 HIST1H2BLQ99880 126 aa6.1□□□□□ -1.43
SSBP3-206ENST00000420121 PCP2Q8IVA1 136 aa6.09□□□□□ -1.43
SSBP3-206ENST00000420121 TRBV7-6A0A0J9YX20 115 aa6.08□□□□□ -1.44
SSBP3-206ENST00000420121 LINC01547P58512 204 aaPredicted RBP6.08□□□□□ -1.44
SSBP3-206ENST00000420121 SCGB1D4Q6XE38 83 aa6.08□□□□□ -1.44
SSBP3-206ENST00000420121 KRTAP23-1A1A580 65 aa6.07□□□□□ -1.44
SSBP3-206ENST00000420121 IFITM1P13164 125 aa6.07□□□□□ -1.44
SSBP3-206ENST00000420121 SMIM29Q86T20 159 aa6.07□□□□□ -1.44
SSBP3-206ENST00000420121 KRTAP4-9Q9BYQ8 210 aa6.07□□□□□ -1.44
SSBP3-206ENST00000420121 SEC61BP60468 96 aaKnown RBP6.06□□□□□ -1.44
SSBP3-206ENST00000420121 SLC25A34Q6PIV7 304 aa6.06□□□□□ -1.44
SSBP3-206ENST00000420121 MUSTN1Q8IVN3 82 aa6.06□□□□□ -1.44
SSBP3-206ENST00000420121 LAMTOR3Q9UHA4 124 aa6.06□□□□□ -1.44
SSBP3-206ENST00000420121 IGLV5-48A0A075B6I7 105 aa6.05□□□□□ -1.44
SSBP3-206ENST00000420121 Q1RN00 199 aa6.05□□□□□ -1.44
SSBP3-206ENST00000420121 HRCT1Q6UXD1 115 aa6.05□□□□□ -1.44
SSBP3-206ENST00000420121 Q6ZVH6 145 aa6.05□□□□□ -1.44
SSBP3-206ENST00000420121 TEX49A0A1B0GTD5 131 aa6.04□□□□□ -1.44
SSBP3-206ENST00000420121 A0A1B0GWB2 263 aa6.04□□□□□ -1.44
SSBP3-206ENST00000420121 TAL2Q16559 108 aa6.04□□□□□ -1.44
SSBP3-206ENST00000420121 KRTAP19-4Q3LI73 84 aa6.04□□□□□ -1.44
SSBP3-206ENST00000420121 LCE4AQ5TA78 99 aa6.04□□□□□ -1.44
SSBP3-206ENST00000420121 DEFB105AQ8NG35 78 aa6.04□□□□□ -1.44
SSBP3-206ENST00000420121 CD164Q04900 197 aa6.03□□□□□ -1.44
SSBP3-206ENST00000420121 BATFQ16520 125 aa6.03□□□□□ -1.44
SSBP3-206ENST00000420121 COPS9Q8WXC6 57 aa6.03□□□□□ -1.44
SSBP3-206ENST00000420121 LIMD2Q9BT23 127 aa6.03□□□□□ -1.44
SSBP3-206ENST00000420121 V9GYY9 64 aa6.03□□□□□ -1.44
SSBP3-206ENST00000420121 A0A0G2JQZ4 141 aa6.02□□□□□ -1.45
SSBP3-206ENST00000420121 A6NDN8 102 aa6.02□□□□□ -1.45
SSBP3-206ENST00000420121 HSD52Q0P140 79 aa6.02□□□□□ -1.45
SSBP3-206ENST00000420121 GTF2H5Q6ZYL4 71 aa6.02□□□□□ -1.45
SSBP3-206ENST00000420121 SMIM11BQ8TCY0 68 aa6.02□□□□□ -1.45
SSBP3-206ENST00000420121 KRTAP19-2Q3LHN2 52 aa6.01□□□□□ -1.45
SSBP3-206ENST00000420121 Q5XG85 94 aa6.01□□□□□ -1.45
SSBP3-206ENST00000420121 J3QR89 54 aa6□□□□□ -1.45
SSBP3-206ENST00000420121 UQCR10Q9UDW1 63 aa6□□□□□ -1.45
SSBP3-206ENST00000420121 TRAV13-2A0A0B4J235 113 aa5.99□□□□□ -1.45
SSBP3-206ENST00000420121 C9orf92A6NGG3 77 aa5.99□□□□□ -1.45
SSBP3-206ENST00000420121 H7C2G1 150 aa5.99□□□□□ -1.45
SSBP3-206ENST00000420121 C1orf195Q5TG92 126 aa5.98□□□□□ -1.45
SSBP3-206ENST00000420121 PCOTHQ58A44 107 aa5.97□□□□□ -1.45
SSBP3-206ENST00000420121 ANAPC13Q9BS18 74 aa5.96□□□□□ -1.46
SSBP3-206ENST00000420121 A0A1B0GX51 115 aa5.95□□□□□ -1.46
SSBP3-206ENST00000420121 LINC00575Q6W349 94 aa5.95□□□□□ -1.46
SSBP3-206ENST00000420121 VAMP8Q9BV40 100 aa5.95□□□□□ -1.46
SSBP3-206ENST00000420121 NHP2Q9NX24 153 aaKnown RBP5.95□□□□□ -1.46
SSBP3-206ENST00000420121 KRTAP4-2Q9BYR5 136 aa5.94□□□□□ -1.46
SSBP3-206ENST00000420121 J3KT08 172 aa5.93□□□□□ -1.46
SSBP3-206ENST00000420121 Q6ZQY7 126 aa5.93□□□□□ -1.46
SSBP3-206ENST00000420121 IGLV8-61A0A075B6I0 122 aa5.92□□□□□ -1.46
SSBP3-206ENST00000420121 PRO0628Q9UI54 55 aa5.92□□□□□ -1.46
SSBP3-206ENST00000420121 TAX1BP3O14907 124 aa5.91□□□□□ -1.46
SSBP3-206ENST00000420121 RPS28P62857 69 aaKnown RBP5.91□□□□□ -1.46
SSBP3-206ENST00000420121 hADV29S1A0JD25 119 aa5.9□□□□□ -1.46
SSBP3-206ENST00000420121 KRTAP9-7A8MTY7 169 aa5.9□□□□□ -1.46
SSBP3-206ENST00000420121 MT1HP80294 61 aa5.9□□□□□ -1.46
SSBP3-206ENST00000420121 COX8AP10176 69 aa5.89□□□□□ -1.47
SSBP3-206ENST00000420121 RPL37P61927 97 aaKnown RBP5.89□□□□□ -1.47
SSBP3-206ENST00000420121 IGFL1Q6UW32 110 aa5.89□□□□□ -1.47
SSBP3-206ENST00000420121 A0A0A0MQY5 61 aa5.88□□□□□ -1.47
SSBP3-206ENST00000420121 K7EP34 96 aa5.88□□□□□ -1.47
SSBP3-206ENST00000420121 TRBV7-7A0A0K0K1E9 115 aa5.87□□□□□ -1.47
SSBP3-206ENST00000420121 F8WEM9 126 aa5.87□□□□□ -1.47
SSBP3-206ENST00000420121 TCL1BO95988 128 aa5.87□□□□□ -1.47
SSBP3-206ENST00000420121 Q6JHZ5 121 aa5.87□□□□□ -1.47
SSBP3-206ENST00000420121 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.87□□□□□ -1.47
SSBP3-206ENST00000420121 CLEC2BQ92478 149 aa5.87□□□□□ -1.47
SSBP3-206ENST00000420121 HIST1H4GQ99525 98 aa5.87□□□□□ -1.47
SSBP3-206ENST00000420121 PAM16Q9Y3D7 125 aa5.86□□□□□ -1.47
SSBP3-206ENST00000420121 FLGP20930 4061 aaPredicted RBP5.86□□□□□ -1.47
SSBP3-206ENST00000420121 CFC1BP0CG36 223 aa5.85□□□□□ -1.47
SSBP3-206ENST00000420121 CFC1P0CG37 223 aa5.85□□□□□ -1.47
SSBP3-206ENST00000420121 BVES-AS1Q5T3Y7 98 aa5.85□□□□□ -1.47
SSBP3-206ENST00000420121 KRTAP4-11Q9BYQ6 195 aa5.85□□□□□ -1.47
SSBP3-206ENST00000420121 SPATA45Q537H7 98 aa5.84□□□□□ -1.47
SSBP3-206ENST00000420121 C2orf91Q6ZV80 131 aa5.84□□□□□ -1.47
SSBP3-206ENST00000420121 PPDPFLQ8WWR9 84 aa5.84□□□□□ -1.47
SSBP3-206ENST00000420121 C9JAW5 83 aa5.83□□□□□ -1.48
SSBP3-206ENST00000420121 FAM218AQ96MZ4 157 aa5.83□□□□□ -1.48
SSBP3-206ENST00000420121 HIGD1BQ9P298 99 aa5.83□□□□□ -1.48
SSBP3-206ENST00000420121 H3BUT2 72 aa5.82□□□□□ -1.48
SSBP3-206ENST00000420121 C4orf26Q17RF5 130 aa5.82□□□□□ -1.48
SSBP3-206ENST00000420121 Q6Q795 121 aa5.82□□□□□ -1.48
SSBP3-206ENST00000420121 A0A0B4J2C4 111 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms