RNA–Protein interactions for RNA: ENST00000418381.5

UBR3-203, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 7,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-203ENST00000418381 ATRQ13535 2644 aa10.92□□□□□ -0.66
UBR3-203ENST00000418381 FLNBO75369 2602 aaKnown RBP10.91□□□□□ -0.66
UBR3-203ENST00000418381 AKAP13Q12802 2813 aa10.89□□□□□ -0.67
UBR3-203ENST00000418381 MAST4O15021 2626 aa10.89□□□□□ -0.67
UBR3-203ENST00000418381 KRTAP1-1Q07627 177 aa10.88□□□□□ -0.67
UBR3-203ENST00000418381 TRIOO75962 3097 aa10.88□□□□□ -0.67
UBR3-203ENST00000418381 ADM2Q7Z4H4 148 aa10.87□□□□□ -0.67
UBR3-203ENST00000418381 ITPR3Q14573 2671 aa10.87□□□□□ -0.67
UBR3-203ENST00000418381 PRUNE2Q8WUY3 3088 aa10.87□□□□□ -0.67
UBR3-203ENST00000418381 Q8N9P0 234 aaPredicted RBP10.87□□□□□ -0.67
UBR3-203ENST00000418381 PLAC8Q9NZF1 115 aa10.86□□□□□ -0.67
UBR3-203ENST00000418381 FREM2Q5SZK8 3169 aa10.84□□□□□ -0.67
UBR3-203ENST00000418381 FLNAP21333 2647 aaKnown RBP10.84□□□□□ -0.67
UBR3-203ENST00000418381 OXTP01178 125 aa10.83□□□□□ -0.68
UBR3-203ENST00000418381 LCE6AA0A183 80 aa10.81□□□□□ -0.68
UBR3-203ENST00000418381 KRTAP10-1P60331 282 aa10.78□□□□□ -0.68
UBR3-203ENST00000418381 Q5W150 140 aa10.78□□□□□ -0.68
UBR3-203ENST00000418381 CDH23Q9H251 3354 aa10.78□□□□□ -0.68
UBR3-203ENST00000418381 VPS13AQ96RL7 3174 aa10.77□□□□□ -0.68
UBR3-203ENST00000418381 RANBP2P49792 3224 aaKnown RBP10.77□□□□□ -0.69
UBR3-203ENST00000418381 KLK9Q2XQG4 91 aa10.77□□□□□ -0.69
UBR3-203ENST00000418381 KRTAP10-2P60368 255 aa10.77□□□□□ -0.69
UBR3-203ENST00000418381 UNC80Q8N2C7 3258 aa10.73□□□□□ -0.69
UBR3-203ENST00000418381 HELZ2Q9BYK8 2649 aaKnown RBP10.73□□□□□ -0.69
UBR3-203ENST00000418381 PRAC1Q96KF2 57 aa10.72□□□□□ -0.69
UBR3-203ENST00000418381 STAB1Q9NY15 2570 aa10.69□□□□□ -0.7
UBR3-203ENST00000418381 OCR1Q9BZK8 76 aa10.69□□□□□ -0.7
UBR3-203ENST00000418381 TEX15Q9BXT5 2789 aa10.68□□□□□ -0.7
UBR3-203ENST00000418381 ROMO1P60602 79 aa10.67□□□□□ -0.7
UBR3-203ENST00000418381 HTTP42858 3142 aa10.66□□□□□ -0.7
UBR3-203ENST00000418381 MMP24-AS1A0A0U1RRL7 71 aa10.66□□□□□ -0.7
UBR3-203ENST00000418381 REV3LO60673 3130 aa10.66□□□□□ -0.7
UBR3-203ENST00000418381 RPL37P61927 97 aaKnown RBP10.64□□□□□ -0.71
UBR3-203ENST00000418381 Q75L30 129 aa10.64□□□□□ -0.71
UBR3-203ENST00000418381 C20orf166-AS1Q96NR2 134 aa10.63□□□□□ -0.71
UBR3-203ENST00000418381 SPATA8Q6RVD6 105 aa10.63□□□□□ -0.71
UBR3-203ENST00000418381 NBEAL1Q6ZS30 2694 aa10.62□□□□□ -0.71
UBR3-203ENST00000418381 DMBT1Q9UGM3 2413 aaPredicted RBP10.62□□□□□ -0.71
UBR3-203ENST00000418381 SZT2Q5T011 3432 aa10.61□□□□□ -0.71
UBR3-203ENST00000418381 WDFY4Q6ZS81 3184 aa10.61□□□□□ -0.71
UBR3-203ENST00000418381 MGAQ8IWI9 3026 aa10.6□□□□□ -0.71
UBR3-203ENST00000418381 CHD6Q8TD26 2715 aa10.57□□□□□ -0.72
UBR3-203ENST00000418381 CENPEQ02224 2701 aa10.54□□□□□ -0.72
UBR3-203ENST00000418381 KRTAP1-5Q9BYS1 174 aa10.53□□□□□ -0.72
UBR3-203ENST00000418381 FP248Q71RG6 208 aaPredicted RBP10.53□□□□□ -0.72
UBR3-203ENST00000418381 H3BS24 57 aa10.51□□□□□ -0.73
UBR3-203ENST00000418381 LINC01558Q9Y6Z2 57 aa10.51□□□□□ -0.73
UBR3-203ENST00000418381 Q8NDZ9 215 aa10.5□□□□□ -0.73
UBR3-203ENST00000418381 VCANP13611 3396 aa10.49□□□□□ -0.73
UBR3-203ENST00000418381 LAMA1P25391 3075 aa10.47□□□□□ -0.73
UBR3-203ENST00000418381 FRYQ5TBA9 3013 aa10.46□□□□□ -0.74
UBR3-203ENST00000418381 A8MUU9 505 aa10.44□□□□□ -0.74
UBR3-203ENST00000418381 COL6A5A8TX70 2615 aa10.43□□□□□ -0.74
UBR3-203ENST00000418381 Q6ZR54 194 aa10.43□□□□□ -0.74
UBR3-203ENST00000418381 LINC00472Q9H8W2 130 aa10.41□□□□□ -0.74
UBR3-203ENST00000418381 CRYBG3Q68DQ2 2970 aa10.41□□□□□ -0.74
UBR3-203ENST00000418381 UNC79Q9P2D8 2635 aa10.38□□□□□ -0.75
UBR3-203ENST00000418381 A0A087X002 238 aa10.38□□□□□ -0.75
UBR3-203ENST00000418381 SPRR1BP22528 89 aa10.38□□□□□ -0.75
UBR3-203ENST00000418381 CHD9Q3L8U1 2897 aa10.38□□□□□ -0.75
UBR3-203ENST00000418381 COL6A3P12111 3177 aa10.38□□□□□ -0.75
UBR3-203ENST00000418381 KRTAP26-1Q6PEX3 210 aa10.37□□□□□ -0.75
UBR3-203ENST00000418381 TEP1Q99973 2627 aaKnown RBP10.35□□□□□ -0.75
UBR3-203ENST00000418381 PANO1I0J062 215 aa10.35□□□□□ -0.75
UBR3-203ENST00000418381 MAP1AP78559 2803 aaPredicted RBP10.34□□□□□ -0.75
UBR3-203ENST00000418381 SETXQ7Z333 2677 aaKnown RBP10.34□□□□□ -0.75
UBR3-203ENST00000418381 TRANK1O15050 2925 aa10.33□□□□□ -0.76
UBR3-203ENST00000418381 Q5VV11 94 aa10.33□□□□□ -0.76
UBR3-203ENST00000418381 SPRR1AP35321 89 aa10.32□□□□□ -0.76
UBR3-203ENST00000418381 CYSTM1Q9H1C7 97 aa10.32□□□□□ -0.76
UBR3-203ENST00000418381 STAB2Q8WWQ8 2551 aa10.3□□□□□ -0.76
UBR3-203ENST00000418381 KALRNO60229 2985 aa10.29□□□□□ -0.76
UBR3-203ENST00000418381 DSPP15924 2871 aaKnown RBP10.28□□□□□ -0.76
UBR3-203ENST00000418381 BAHCC1Q9P281 2608 aa10.27□□□□□ -0.77
UBR3-203ENST00000418381 SPEGQ15772 3267 aa10.23□□□□□ -0.77
UBR3-203ENST00000418381 C10orf95Q9H7T3 257 aa10.2□□□□□ -0.78
UBR3-203ENST00000418381 ITPR2Q14571 2701 aa10.2□□□□□ -0.78
UBR3-203ENST00000418381 A0A1B0GVY2 172 aa10.19□□□□□ -0.78
UBR3-203ENST00000418381 Q5XG85 94 aa10.19□□□□□ -0.78
UBR3-203ENST00000418381 CFAP47Q6ZTR5 3102 aa10.18□□□□□ -0.78
UBR3-203ENST00000418381 FRYLO94915 3013 aa10.18□□□□□ -0.78
UBR3-203ENST00000418381 A8MU10 97 aa10.16□□□□□ -0.78
UBR3-203ENST00000418381 GCN1Q92616 2671 aaKnown RBP10.16□□□□□ -0.78
UBR3-203ENST00000418381 KMT2BQ9UMN6 2715 aaPredicted RBP10.14□□□□□ -0.79
UBR3-203ENST00000418381 KRTAP10-8P60410 259 aa10.14□□□□□ -0.79
UBR3-203ENST00000418381 TNP1P09430 55 aa10.13□□□□□ -0.79
UBR3-203ENST00000418381 LRBAP50851 2863 aa10.11□□□□□ -0.79
UBR3-203ENST00000418381 BOD1L1Q8NFC6 3051 aa10.1□□□□□ -0.79
UBR3-203ENST00000418381 NBEAL2Q6ZNJ1 2754 aa10.07□□□□□ -0.8
UBR3-203ENST00000418381 MYO15AQ9UKN7 3530 aa10.07□□□□□ -0.8
UBR3-203ENST00000418381 NOTCH1P46531 2555 aa10.07□□□□□ -0.8
UBR3-203ENST00000418381 NOTCH2NLQ7Z3S9 236 aa10.07□□□□□ -0.8
UBR3-203ENST00000418381 KRTAP16-1A8MUX0 517 aa10.06□□□□□ -0.8
UBR3-203ENST00000418381 NBEAQ8NFP9 2946 aa10.04□□□□□ -0.8
UBR3-203ENST00000418381 SPTBN5Q9NRC6 3674 aaKnown RBP10.03□□□□□ -0.8
UBR3-203ENST00000418381 USP34Q70CQ2 3546 aa10□□□□□ -0.81
UBR3-203ENST00000418381 DMXL2Q8TDJ6 3036 aa10□□□□□ -0.81
UBR3-203ENST00000418381 APCP25054 2843 aa9.98□□□□□ -0.81
UBR3-203ENST00000418381 WDFY3Q8IZQ1 3526 aa9.98□□□□□ -0.81
UBR3-203ENST00000418381 EYSQ5T1H1 3165 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms