RNA–Protein interactions for RNA: ENST00000417478.6

RUFY3-203, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-203ENST00000417478 PRLHP81277 87 aa12.45□□□□□ -0.42
RUFY3-203ENST00000417478 UBL5Q9BZL1 73 aa12.45□□□□□ -0.42
RUFY3-203ENST00000417478 H0Y9J4 135 aa12.44□□□□□ -0.42
RUFY3-203ENST00000417478 CIRBP-AS1Q8TBR5 109 aa12.44□□□□□ -0.42
RUFY3-203ENST00000417478 SCXQ7RTU7 201 aa12.43□□□□□ -0.42
RUFY3-203ENST00000417478 ATP5EP2Q5VTU8 51 aa12.41□□□□□ -0.42
RUFY3-203ENST00000417478 HIGD2AQ9BW72 106 aa12.4□□□□□ -0.42
RUFY3-203ENST00000417478 C3orf22Q8N5N4 141 aa12.4□□□□□ -0.43
RUFY3-203ENST00000417478 APOBP04114 4563 aaKnown RBP12.39□□□□□ -0.43
RUFY3-203ENST00000417478 IGKV3D-7A0A0C4DH55 119 aa12.39□□□□□ -0.43
RUFY3-203ENST00000417478 SRRM2Q9UQ35 2752 aaKnown RBP12.39□□□□□ -0.43
RUFY3-203ENST00000417478 BCE1O60756 84 aa12.38□□□□□ -0.43
RUFY3-203ENST00000417478 UBE2AP49459 152 aa12.37□□□□□ -0.43
RUFY3-203ENST00000417478 Q6ZVQ6 151 aa12.35□□□□□ -0.43
RUFY3-203ENST00000417478 SMIM29Q86T20 159 aa12.35□□□□□ -0.43
RUFY3-203ENST00000417478 EPPK1P58107 5090 aaKnown RBP12.35□□□□□ -0.43
RUFY3-203ENST00000417478 ANAPC13Q9BS18 74 aa12.34□□□□□ -0.43
RUFY3-203ENST00000417478 C1orf137Q5JT78 98 aa12.33□□□□□ -0.44
RUFY3-203ENST00000417478 A0A1B0GW54 56 aa12.32□□□□□ -0.44
RUFY3-203ENST00000417478 F8WEM9 126 aa12.32□□□□□ -0.44
RUFY3-203ENST00000417478 KRTAP13-1Q8IUC0 172 aa12.32□□□□□ -0.44
RUFY3-203ENST00000417478 FAM236AA0A1B0GUQ0 79 aa12.31□□□□□ -0.44
RUFY3-203ENST00000417478 FAM236BA0A1B0GV22 79 aa12.31□□□□□ -0.44
RUFY3-203ENST00000417478 PSORS1C2Q9UIG4 136 aa12.31□□□□□ -0.44
RUFY3-203ENST00000417478 SPRR1BP22528 89 aa12.29□□□□□ -0.44
RUFY3-203ENST00000417478 VPS13BQ7Z7G8 4022 aa12.28□□□□□ -0.44
RUFY3-203ENST00000417478 Q8NBF4 154 aa12.27□□□□□ -0.45
RUFY3-203ENST00000417478 A0A1W2PNM2 257 aa12.26□□□□□ -0.45
RUFY3-203ENST00000417478 IGLV8-61A0A075B6I0 122 aa12.26□□□□□ -0.45
RUFY3-203ENST00000417478 CXCL6P80162 114 aa12.26□□□□□ -0.45
RUFY3-203ENST00000417478 HIST1H4AP62805 103 aaKnown RBP12.25□□□□□ -0.45
RUFY3-203ENST00000417478 SPRR4Q96PI1 79 aa12.23□□□□□ -0.45
RUFY3-203ENST00000417478 FAT1Q14517 4588 aa12.23□□□□□ -0.45
RUFY3-203ENST00000417478 A0A087WVE0 104 aa12.22□□□□□ -0.45
RUFY3-203ENST00000417478 NREPQ16612 68 aa12.22□□□□□ -0.45
RUFY3-203ENST00000417478 IGFL1Q6UW32 110 aa12.2□□□□□ -0.46
RUFY3-203ENST00000417478 SMR3BP02814 79 aaPredicted RBP12.19□□□□□ -0.46
RUFY3-203ENST00000417478 CRYGAP11844 174 aa12.18□□□□□ -0.46
RUFY3-203ENST00000417478 ATOX1O00244 68 aa12.17□□□□□ -0.46
RUFY3-203ENST00000417478 HSPG2P98160 4391 aa12.16□□□□□ -0.46
RUFY3-203ENST00000417478 RYR1P21817 5038 aa12.16□□□□□ -0.46
RUFY3-203ENST00000417478 IGLV7-43P04211 117 aa12.15□□□□□ -0.46
RUFY3-203ENST00000417478 ZNF706Q9Y5V0 76 aaPredicted RBP12.15□□□□□ -0.46
RUFY3-203ENST00000417478 KIAA1109Q2LD37 5005 aa12.15□□□□□ -0.46
RUFY3-203ENST00000417478 ZNF861PO60384 105 aa12.14□□□□□ -0.47
RUFY3-203ENST00000417478 LINC00483Q53H64 154 aa12.12□□□□□ -0.47
RUFY3-203ENST00000417478 BPY2O14599 106 aa12.11□□□□□ -0.47
RUFY3-203ENST00000417478 A0A0G2JQZ4 141 aa12.11□□□□□ -0.47
RUFY3-203ENST00000417478 RPL37AP61513 92 aaKnown RBP12.07□□□□□ -0.48
RUFY3-203ENST00000417478 CCDC179H3BU77 68 aa12.06□□□□□ -0.48
RUFY3-203ENST00000417478 CDK2AP2O75956 126 aa12.05□□□□□ -0.48
RUFY3-203ENST00000417478 A0A087WSZ3 146 aa12.04□□□□□ -0.48
RUFY3-203ENST00000417478 IGKV4-1P06312 121 aa12.03□□□□□ -0.48
RUFY3-203ENST00000417478 COX7CP15954 63 aa12.02□□□□□ -0.49
RUFY3-203ENST00000417478 UQCRQO14949 82 aa12.01□□□□□ -0.49
RUFY3-203ENST00000417478 IGLV9-49A0A0B4J1Y8 123 aa12.01□□□□□ -0.49
RUFY3-203ENST00000417478 KRTAP10-4P60372 401 aaPredicted RBP12.01□□□□□ -0.49
RUFY3-203ENST00000417478 C9orf153Q5TBE3 101 aa12.01□□□□□ -0.49
RUFY3-203ENST00000417478 SERP2Q8N6R1 65 aa12.01□□□□□ -0.49
RUFY3-203ENST00000417478 Q8N9L7 120 aa12.01□□□□□ -0.49
RUFY3-203ENST00000417478 ANAPC11Q9NYG5 84 aa11.99□□□□□ -0.49
RUFY3-203ENST00000417478 KRTAP17-1Q9BYP8 105 aa11.97□□□□□ -0.49
RUFY3-203ENST00000417478 DSCR10P59022 87 aa11.96□□□□□ -0.5
RUFY3-203ENST00000417478 SMIM20Q8N5G0 67 aa11.95□□□□□ -0.5
RUFY3-203ENST00000417478 MOBPQ13875 183 aa11.92□□□□□ -0.5
RUFY3-203ENST00000417478 FAM229AH3BQW9 127 aa11.91□□□□□ -0.5
RUFY3-203ENST00000417478 Q5VSD8 79 aa11.9□□□□□ -0.5
RUFY3-203ENST00000417478 TRAV7A0A075B6U4 112 aa11.9□□□□□ -0.5
RUFY3-203ENST00000417478 BIRC6Q9NR09 4857 aa11.9□□□□□ -0.51
RUFY3-203ENST00000417478 SPINK6Q6UWN8 80 aa11.89□□□□□ -0.51
RUFY3-203ENST00000417478 PKHD1L1Q86WI1 4243 aa11.89□□□□□ -0.51
RUFY3-203ENST00000417478 K7EQZ3 153 aa11.89□□□□□ -0.51
RUFY3-203ENST00000417478 PLA2G1BP04054 148 aaKnown RBP11.87□□□□□ -0.51
RUFY3-203ENST00000417478 LINC00472Q9H8W2 130 aa11.87□□□□□ -0.51
RUFY3-203ENST00000417478 DEFB116Q30KQ4 102 aa11.87□□□□□ -0.51
RUFY3-203ENST00000417478 KRTAP1-4P0C5Y4 121 aa11.86□□□□□ -0.51
RUFY3-203ENST00000417478 SS18L2Q9UHA2 77 aa11.84□□□□□ -0.51
RUFY3-203ENST00000417478 A0A087X002 238 aa11.83□□□□□ -0.52
RUFY3-203ENST00000417478 J3KT08 172 aa11.81□□□□□ -0.52
RUFY3-203ENST00000417478 HRCT1Q6UXD1 115 aa11.81□□□□□ -0.52
RUFY3-203ENST00000417478 Q8N1X5 172 aa11.81□□□□□ -0.52
RUFY3-203ENST00000417478 SSBP3-AS1Q7Z2R9 100 aa11.8□□□□□ -0.52
RUFY3-203ENST00000417478 A8MWP4 228 aa11.79□□□□□ -0.52
RUFY3-203ENST00000417478 HCG22E2RYF7 251 aa11.78□□□□□ -0.52
RUFY3-203ENST00000417478 FAM229BQ4G0N7 80 aa11.78□□□□□ -0.52
RUFY3-203ENST00000417478 KRTAP13-2Q52LG2 175 aa11.77□□□□□ -0.52
RUFY3-203ENST00000417478 OCR1Q9BZK8 76 aa11.77□□□□□ -0.52
RUFY3-203ENST00000417478 CD164Q04900 197 aa11.77□□□□□ -0.53
RUFY3-203ENST00000417478 PRR15Q8IV56 129 aa11.77□□□□□ -0.53
RUFY3-203ENST00000417478 Q96NJ1 140 aa11.76□□□□□ -0.53
RUFY3-203ENST00000417478 LRP1Q07954 4544 aaKnown RBP11.76□□□□□ -0.53
RUFY3-203ENST00000417478 FLG2Q5D862 2391 aaPredicted RBP11.74□□□□□ -0.53
RUFY3-203ENST00000417478 C20orf197Q8N268 126 aa11.74□□□□□ -0.53
RUFY3-203ENST00000417478 NDUFB1O75438 58 aa11.71□□□□□ -0.53
RUFY3-203ENST00000417478 PRR26Q8N8Z3 221 aa11.71□□□□□ -0.54
RUFY3-203ENST00000417478 CYSTM1Q9H1C7 97 aa11.71□□□□□ -0.54
RUFY3-203ENST00000417478 HERC2O95714 4834 aa11.71□□□□□ -0.54
RUFY3-203ENST00000417478 MYCBP2O75592 4640 aa11.7□□□□□ -0.54
RUFY3-203ENST00000417478 KRTAP4-5Q9BYR2 181 aa11.68□□□□□ -0.54
RUFY3-203ENST00000417478 KLKP1Q107X0 134 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms