RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 DEFB116Q30KQ4 102 aa6.22□□□□□ -1.41
SS18-203ENST00000415083 C1orf137Q5JT78 98 aa6.22□□□□□ -1.41
SS18-203ENST00000415083 KMT2AQ03164 3969 aa6.22□□□□□ -1.41
SS18-203ENST00000415083 VPS13DQ5THJ4 4388 aa6.22□□□□□ -1.41
SS18-203ENST00000415083 MRPL55Q7Z7F7 128 aaKnown RBP6.22□□□□□ -1.41
SS18-203ENST00000415083 LCE6AA0A183 80 aa6.22□□□□□ -1.41
SS18-203ENST00000415083 Q8NBF4 154 aa6.22□□□□□ -1.41
SS18-203ENST00000415083 DHRS4-AS1Q9P1J3 65 aa6.22□□□□□ -1.41
SS18-203ENST00000415083 K7EQZ3 153 aa6.21□□□□□ -1.42
SS18-203ENST00000415083 FBN3Q75N90 2809 aa6.2□□□□□ -1.42
SS18-203ENST00000415083 K7EIL1 84 aa6.2□□□□□ -1.42
SS18-203ENST00000415083 A0A096LNI7 61 aa6.19□□□□□ -1.42
SS18-203ENST00000415083 ETDCA0A1B0GVM5 59 aa6.19□□□□□ -1.42
SS18-203ENST00000415083 DNAH17Q9UFH2 4485 aa6.19□□□□□ -1.42
SS18-203ENST00000415083 LINC00476Q8WZB0 136 aa6.18□□□□□ -1.42
SS18-203ENST00000415083 UBE2BP63146 152 aa6.18□□□□□ -1.42
SS18-203ENST00000415083 IGFL1Q6UW32 110 aa6.18□□□□□ -1.42
SS18-203ENST00000415083 ZCCHC13Q8WW36 166 aaKnown RBP6.17□□□□□ -1.42
SS18-203ENST00000415083 ATP5EP56381 51 aaPredicted RBP6.17□□□□□ -1.42
SS18-203ENST00000415083 PRLHP81277 87 aa6.17□□□□□ -1.42
SS18-203ENST00000415083 REG3GQ6UW15 175 aa6.17□□□□□ -1.42
SS18-203ENST00000415083 ALMS1Q8TCU4 4167 aa6.14□□□□□ -1.43
SS18-203ENST00000415083 CHTF8P0CG12 524 aa6.14□□□□□ -1.43
SS18-203ENST00000415083 WFDC13Q8IUB5 93 aa6.14□□□□□ -1.43
SS18-203ENST00000415083 A0A1B0GW54 56 aa6.13□□□□□ -1.43
SS18-203ENST00000415083 C1orf64Q8NEQ6 169 aa6.13□□□□□ -1.43
SS18-203ENST00000415083 MGAM2Q2M2H8 2515 aa6.13□□□□□ -1.43
SS18-203ENST00000415083 IGKV2-24A0A0C4DH68 120 aa6.13□□□□□ -1.43
SS18-203ENST00000415083 PANO1I0J062 215 aa6.13□□□□□ -1.43
SS18-203ENST00000415083 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.12□□□□□ -1.43
SS18-203ENST00000415083 PSPHP1O15172 72 aa6.12□□□□□ -1.43
SS18-203ENST00000415083 IGLV8-61A0A075B6I0 122 aa6.12□□□□□ -1.43
SS18-203ENST00000415083 RPL37AP61513 92 aaKnown RBP6.12□□□□□ -1.43
SS18-203ENST00000415083 C16orf90A8MZG2 172 aa6.12□□□□□ -1.43
SS18-203ENST00000415083 CNBPP62633 177 aaKnown RBP6.12□□□□□ -1.43
SS18-203ENST00000415083 PHF5AQ7RTV0 110 aaKnown RBP6.12□□□□□ -1.43
SS18-203ENST00000415083 DNAH6Q9C0G6 4158 aa6.12□□□□□ -1.43
SS18-203ENST00000415083 PSCAO43653 123 aa6.11□□□□□ -1.43
SS18-203ENST00000415083 hDV103S1A0JD37 113 aa6.11□□□□□ -1.43
SS18-203ENST00000415083 A0A087WSZ3 146 aa6.09□□□□□ -1.43
SS18-203ENST00000415083 KRTAP29-1A8MX34 341 aaPredicted RBP6.09□□□□□ -1.43
SS18-203ENST00000415083 HCG22E2RYF7 251 aa6.09□□□□□ -1.43
SS18-203ENST00000415083 APLNQ9ULZ1 77 aa6.08□□□□□ -1.44
SS18-203ENST00000415083 C1orf195Q5TG92 126 aa6.07□□□□□ -1.44
SS18-203ENST00000415083 KRTAP13-1Q8IUC0 172 aa6.06□□□□□ -1.44
SS18-203ENST00000415083 LINC00208Q96KT6 92 aa6.06□□□□□ -1.44
SS18-203ENST00000415083 DNAH11Q96DT5 4516 aa6.06□□□□□ -1.44
SS18-203ENST00000415083 DNAH5Q8TE73 4624 aa6.05□□□□□ -1.44
SS18-203ENST00000415083 SPRR1BP22528 89 aa6.05□□□□□ -1.44
SS18-203ENST00000415083 Q6ZRN7 208 aaPredicted RBP6.05□□□□□ -1.44
SS18-203ENST00000415083 LINC00472Q9H8W2 130 aa6.05□□□□□ -1.44
SS18-203ENST00000415083 A8MU10 97 aa6.03□□□□□ -1.44
SS18-203ENST00000415083 TRAV22A0A0B4J277 110 aa6.03□□□□□ -1.44
SS18-203ENST00000415083 A8MUN3 132 aa6.02□□□□□ -1.45
SS18-203ENST00000415083 UBE2AP49459 152 aa6.02□□□□□ -1.45
SS18-203ENST00000415083 H0Y9J4 135 aa6.01□□□□□ -1.45
SS18-203ENST00000415083 Q96NJ1 140 aa6.01□□□□□ -1.45
SS18-203ENST00000415083 MP68P56378 58 aa6.01□□□□□ -1.45
SS18-203ENST00000415083 C9orf163Q8N9P6 203 aa6.01□□□□□ -1.45
SS18-203ENST00000415083 Q1T7F1 81 aa6□□□□□ -1.45
SS18-203ENST00000415083 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6□□□□□ -1.45
SS18-203ENST00000415083 PRR15Q8IV56 129 aa5.99□□□□□ -1.45
SS18-203ENST00000415083 PKD1P98161 4303 aa5.99□□□□□ -1.45
SS18-203ENST00000415083 CYP4F30PQ9H0H9 118 aa5.99□□□□□ -1.45
SS18-203ENST00000415083 MEGF8Q7Z7M0 2845 aa5.99□□□□□ -1.45
SS18-203ENST00000415083 DNHD1Q96M86 4753 aa5.99□□□□□ -1.45
SS18-203ENST00000415083 H0Y9P7 68 aa5.98□□□□□ -1.45
SS18-203ENST00000415083 CASC2Q6XLA1 102 aa5.98□□□□□ -1.45
SS18-203ENST00000415083 B9D2Q9BPU9 175 aa5.97□□□□□ -1.45
SS18-203ENST00000415083 V9GYY9 64 aa5.97□□□□□ -1.45
SS18-203ENST00000415083 MMP24-AS1A0A0U1RRL7 71 aa5.97□□□□□ -1.45
SS18-203ENST00000415083 A8MWP4 228 aa5.96□□□□□ -1.45
SS18-203ENST00000415083 HYDINQ4G0P3 5121 aa5.95□□□□□ -1.46
SS18-203ENST00000415083 ASB16-AS1Q495Z4 193 aa5.95□□□□□ -1.46
SS18-203ENST00000415083 NDUFB1O75438 58 aa5.95□□□□□ -1.46
SS18-203ENST00000415083 NBDYA0A0U1RRE5 68 aa5.95□□□□□ -1.46
SS18-203ENST00000415083 SPACA4Q8TDM5 124 aa5.95□□□□□ -1.46
SS18-203ENST00000415083 MOBPQ13875 183 aa5.94□□□□□ -1.46
SS18-203ENST00000415083 UBE2DNLQ8IWF7 75 aa5.94□□□□□ -1.46
SS18-203ENST00000415083 LRP1BQ9NZR2 4599 aa5.94□□□□□ -1.46
SS18-203ENST00000415083 PCOTHQ58A44 107 aa5.93□□□□□ -1.46
SS18-203ENST00000415083 FAT2Q9NYQ8 4349 aa5.93□□□□□ -1.46
SS18-203ENST00000415083 CHKB-CPT1BH3BT56 60 aa5.92□□□□□ -1.46
SS18-203ENST00000415083 Q5VV11 94 aa5.92□□□□□ -1.46
SS18-203ENST00000415083 ANAPC11Q9NYG5 84 aa5.92□□□□□ -1.46
SS18-203ENST00000415083 TGP01266 2768 aa5.92□□□□□ -1.46
SS18-203ENST00000415083 MDFIQ99750 246 aa5.92□□□□□ -1.46
SS18-203ENST00000415083 A0A087X002 238 aa5.92□□□□□ -1.46
SS18-203ENST00000415083 NOTCH2NLQ7Z3S9 236 aa5.92□□□□□ -1.46
SS18-203ENST00000415083 PRR15LQ9BU68 103 aa5.92□□□□□ -1.46
SS18-203ENST00000415083 IGLV9-49A0A0B4J1Y8 123 aa5.91□□□□□ -1.46
SS18-203ENST00000415083 LINC00483Q53H64 154 aa5.91□□□□□ -1.46
SS18-203ENST00000415083 SEC61GP60059 68 aa5.9□□□□□ -1.46
SS18-203ENST00000415083 PMAIP1Q13794 54 aa5.9□□□□□ -1.46
SS18-203ENST00000415083 C14orf177Q52M58 125 aa5.9□□□□□ -1.46
SS18-203ENST00000415083 Q8N9P0 234 aaPredicted RBP5.9□□□□□ -1.47
SS18-203ENST00000415083 WWC2-AS2Q96NR7 200 aa5.9□□□□□ -1.47
SS18-203ENST00000415083 SPTSSBQ8NFR3 76 aa5.89□□□□□ -1.47
SS18-203ENST00000415083 VPS13BQ7Z7G8 4022 aa5.87□□□□□ -1.47
SS18-203ENST00000415083 NDUFS5O43920 106 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms