RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 VCANP13611 3396 aa1.66□□□□□ -2.14
SF3B1-203ENST00000414174 ASCC3Q8N3C0 2202 aaKnown RBP1.66□□□□□ -2.14
SF3B1-203ENST00000414174 GPR179Q6PRD1 2367 aa1.66□□□□□ -2.14
SF3B1-203ENST00000414174 PKD1L2Q7Z442 2459 aa1.66□□□□□ -2.14
SF3B1-203ENST00000414174 KNL1Q8NG31 2342 aa1.66□□□□□ -2.14
SF3B1-203ENST00000414174 FLG2Q5D862 2391 aaPredicted RBP1.65□□□□□ -2.14
SF3B1-203ENST00000414174 CACNA1BQ00975 2339 aa1.64□□□□□ -2.15
SF3B1-203ENST00000414174 CENPFP49454 3210 aa1.63□□□□□ -2.15
SF3B1-203ENST00000414174 SPRR1AP35321 89 aa1.63□□□□□ -2.15
SF3B1-203ENST00000414174 ZDBF2Q9HCK1 2354 aa1.63□□□□□ -2.15
SF3B1-203ENST00000414174 DEFB105AQ8NG35 78 aa1.62□□□□□ -2.15
SF3B1-203ENST00000414174 BDP1A6H8Y1 2624 aa1.61□□□□□ -2.15
SF3B1-203ENST00000414174 PTPRZ1P23471 2315 aaPredicted RBP1.61□□□□□ -2.15
SF3B1-203ENST00000414174 FAM186AA6NE01 2351 aa1.61□□□□□ -2.15
SF3B1-203ENST00000414174 CACNA1HO95180 2353 aa1.61□□□□□ -2.15
SF3B1-203ENST00000414174 CHD8Q9HCK8 2581 aa1.61□□□□□ -2.15
SF3B1-203ENST00000414174 PRUNE2Q8WUY3 3088 aa1.61□□□□□ -2.15
SF3B1-203ENST00000414174 LAMA2P24043 3122 aaKnown RBP1.61□□□□□ -2.15
SF3B1-203ENST00000414174 BAHCC1Q9P281 2608 aa1.6□□□□□ -2.15
SF3B1-203ENST00000414174 ICE1Q9Y2F5 2266 aa1.6□□□□□ -2.15
SF3B1-203ENST00000414174 CNTRLQ7Z7A1 2325 aa1.6□□□□□ -2.15
SF3B1-203ENST00000414174 STATHP02808 62 aa1.6□□□□□ -2.15
SF3B1-203ENST00000414174 SPRR1BP22528 89 aa1.6□□□□□ -2.15
SF3B1-203ENST00000414174 DEFB103AP81534 67 aa1.6□□□□□ -2.15
SF3B1-203ENST00000414174 Q5VSD8 79 aa1.6□□□□□ -2.15
SF3B1-203ENST00000414174 APLNQ9ULZ1 77 aa1.6□□□□□ -2.15
SF3B1-203ENST00000414174 Q9Y3F1 56 aa1.6□□□□□ -2.15
SF3B1-203ENST00000414174 TPRP12270 2363 aaKnown RBP1.6□□□□□ -2.15
SF3B1-203ENST00000414174 CDH23Q9H251 3354 aa1.6□□□□□ -2.15
SF3B1-203ENST00000414174 PRLHP81277 87 aa1.59□□□□□ -2.15
SF3B1-203ENST00000414174 COX14Q96I36 57 aa1.59□□□□□ -2.15
SF3B1-203ENST00000414174 S4R3F8 94 aa1.59□□□□□ -2.15
SF3B1-203ENST00000414174 FAM208BQ5VWN6 2430 aa1.59□□□□□ -2.16
SF3B1-203ENST00000414174 RIF1Q5UIP0 2472 aaKnown RBP1.59□□□□□ -2.16
SF3B1-203ENST00000414174 EYSQ5T1H1 3165 aa1.59□□□□□ -2.16
SF3B1-203ENST00000414174 COL6A6A6NMZ7 2263 aa1.59□□□□□ -2.16
SF3B1-203ENST00000414174 EPG5Q9HCE0 2579 aa1.58□□□□□ -2.16
SF3B1-203ENST00000414174 CACNA1GO43497 2377 aa1.58□□□□□ -2.16
SF3B1-203ENST00000414174 WNK2Q9Y3S1 2297 aa1.58□□□□□ -2.16
SF3B1-203ENST00000414174 H0YGG7 62 aa1.58□□□□□ -2.16
SF3B1-203ENST00000414174 PRO0255Q9UI72 69 aa1.58□□□□□ -2.16
SF3B1-203ENST00000414174 GVINP1Q7Z2Y8 2422 aa1.58□□□□□ -2.16
SF3B1-203ENST00000414174 ACACBO00763 2458 aa1.58□□□□□ -2.16
SF3B1-203ENST00000414174 DCHS1Q96JQ0 3298 aa1.57□□□□□ -2.16
SF3B1-203ENST00000414174 DEFB119Q8N690 84 aa1.57□□□□□ -2.16
SF3B1-203ENST00000414174 ZFHX4Q86UP3 3567 aa1.57□□□□□ -2.16
SF3B1-203ENST00000414174 FASNP49327 2511 aaKnown RBP1.57□□□□□ -2.16
SF3B1-203ENST00000414174 SPTBN4Q9H254 2564 aa1.56□□□□□ -2.16
SF3B1-203ENST00000414174 OTOGLQ3ZCN5 2332 aa1.56□□□□□ -2.16
SF3B1-203ENST00000414174 NCOR2Q9Y618 2525 aa1.56□□□□□ -2.16
SF3B1-203ENST00000414174 PCNX1Q96RV3 2341 aa1.56□□□□□ -2.16
SF3B1-203ENST00000414174 IGF2RP11717 2491 aa1.56□□□□□ -2.16
SF3B1-203ENST00000414174 CFAP54Q96N23 3096 aa1.55□□□□□ -2.16
SF3B1-203ENST00000414174 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
SF3B1-203ENST00000414174 USP34Q70CQ2 3546 aa1.55□□□□□ -2.16
SF3B1-203ENST00000414174 PIEZO2Q9H5I5 2752 aa1.54□□□□□ -2.16
SF3B1-203ENST00000414174 CHD9Q3L8U1 2897 aa1.54□□□□□ -2.16
SF3B1-203ENST00000414174 XIRP2A4UGR9 3374 aa1.54□□□□□ -2.16
SF3B1-203ENST00000414174 MAP1BP46821 2468 aaKnown RBP1.54□□□□□ -2.16
SF3B1-203ENST00000414174 APELAP0DMC3 54 aa1.54□□□□□ -2.16
SF3B1-203ENST00000414174 KRTAP21-3Q3LHN1 58 aa1.54□□□□□ -2.16
SF3B1-203ENST00000414174 USP24Q9UPU5 2620 aa1.54□□□□□ -2.16
SF3B1-203ENST00000414174 CHD6Q8TD26 2715 aa1.54□□□□□ -2.16
SF3B1-203ENST00000414174 CHD7Q9P2D1 2997 aa1.54□□□□□ -2.16
SF3B1-203ENST00000414174 EP300Q09472 2414 aaPredicted RBP1.54□□□□□ -2.16
SF3B1-203ENST00000414174 CEP250Q9BV73 2442 aa1.54□□□□□ -2.16
SF3B1-203ENST00000414174 C5orf42Q9H799 3197 aa1.53□□□□□ -2.16
SF3B1-203ENST00000414174 REV3LO60673 3130 aa1.53□□□□□ -2.16
SF3B1-203ENST00000414174 JMJD1CQ15652 2540 aa1.53□□□□□ -2.16
SF3B1-203ENST00000414174 KRTAP5-7Q6L8G8 165 aa1.53□□□□□ -2.16
SF3B1-203ENST00000414174 NOP10Q9NPE3 64 aaKnown RBP1.53□□□□□ -2.16
SF3B1-203ENST00000414174 TRANK1O15050 2925 aa1.53□□□□□ -2.17
SF3B1-203ENST00000414174 ASH1LQ9NR48 2969 aaKnown RBP1.52□□□□□ -2.17
SF3B1-203ENST00000414174 UNC79Q9P2D8 2635 aa1.52□□□□□ -2.17
SF3B1-203ENST00000414174 CFAP47Q6ZTR5 3102 aa1.52□□□□□ -2.17
SF3B1-203ENST00000414174 ZNF292O60281 2723 aa1.52□□□□□ -2.17
SF3B1-203ENST00000414174 DNAH14Q0VDD8 3507 aa1.52□□□□□ -2.17
SF3B1-203ENST00000414174 NAV3Q8IVL0 2385 aa1.51□□□□□ -2.17
SF3B1-203ENST00000414174 FLNBO75369 2602 aaKnown RBP1.51□□□□□ -2.17
SF3B1-203ENST00000414174 SPINK1P00995 79 aa1.51□□□□□ -2.17
SF3B1-203ENST00000414174 LCE3DQ9BYE3 92 aa1.51□□□□□ -2.17
SF3B1-203ENST00000414174 WDFY4Q6ZS81 3184 aa1.51□□□□□ -2.17
SF3B1-203ENST00000414174 DNAH12Q6ZR08 3092 aa1.5□□□□□ -2.17
SF3B1-203ENST00000414174 MAST4O15021 2626 aa1.5□□□□□ -2.17
SF3B1-203ENST00000414174 J3QKU1 62 aa1.5□□□□□ -2.17
SF3B1-203ENST00000414174 MYO15AQ9UKN7 3530 aa1.5□□□□□ -2.17
SF3B1-203ENST00000414174 NAV2Q8IVL1 2488 aa1.49□□□□□ -2.17
SF3B1-203ENST00000414174 SPTBN2O15020 2390 aa1.49□□□□□ -2.17
SF3B1-203ENST00000414174 KRTAP12-1P59990 96 aa1.49□□□□□ -2.17
SF3B1-203ENST00000414174 ANKRD11Q6UB99 2663 aaPredicted RBP1.49□□□□□ -2.17
SF3B1-203ENST00000414174 WNK1Q9H4A3 2382 aa1.49□□□□□ -2.17
SF3B1-203ENST00000414174 SPTA1P02549 2419 aa1.48□□□□□ -2.17
SF3B1-203ENST00000414174 HELZ2Q9BYK8 2649 aaKnown RBP1.48□□□□□ -2.17
SF3B1-203ENST00000414174 H3BUX3 64 aa1.48□□□□□ -2.17
SF3B1-203ENST00000414174 DEFB1P60022 68 aa1.48□□□□□ -2.17
SF3B1-203ENST00000414174 RHPN1-AS1Q9BWJ2 59 aa1.48□□□□□ -2.17
SF3B1-203ENST00000414174 ZFYVE26Q68DK2 2539 aa1.48□□□□□ -2.17
SF3B1-203ENST00000414174 DMXL1Q9Y485 3027 aa1.48□□□□□ -2.17
SF3B1-203ENST00000414174 DMDP11532 3685 aa1.47□□□□□ -2.17
SF3B1-203ENST00000414174 SETXQ7Z333 2677 aaKnown RBP1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 261.9 ms