RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 SLC25A20O43772 301 aa10.61□□□□□ -0.71
TRIM56-202ENST00000412507 VAMP3Q15836 100 aa10.61□□□□□ -0.71
TRIM56-202ENST00000412507 SMIM29Q86T20 159 aa10.61□□□□□ -0.71
TRIM56-202ENST00000412507 K7ERJ3 54 aa10.6□□□□□ -0.71
TRIM56-202ENST00000412507 HRCT1Q6UXD1 115 aa10.6□□□□□ -0.71
TRIM56-202ENST00000412507 SNHG12Q9BXW3 62 aa10.6□□□□□ -0.71
TRIM56-202ENST00000412507 MUC17Q685J3 4493 aa10.58□□□□□ -0.72
TRIM56-202ENST00000412507 KRTAP13-3Q3SY46 172 aa10.57□□□□□ -0.72
TRIM56-202ENST00000412507 LINC00575Q6W349 94 aa10.57□□□□□ -0.72
TRIM56-202ENST00000412507 H7C2G1 150 aa10.56□□□□□ -0.72
TRIM56-202ENST00000412507 MUC2Q02817 5179 aa10.56□□□□□ -0.72
TRIM56-202ENST00000412507 COL5A1-AS1Q5SY13 56 aa10.55□□□□□ -0.72
TRIM56-202ENST00000412507 hADV29S1A0JD25 119 aa10.53□□□□□ -0.72
TRIM56-202ENST00000412507 LIMD2Q9BT23 127 aa10.53□□□□□ -0.72
TRIM56-202ENST00000412507 Q6ZQY7 126 aa10.52□□□□□ -0.73
TRIM56-202ENST00000412507 A0A0G2JQZ4 141 aa10.51□□□□□ -0.73
TRIM56-202ENST00000412507 PSMB2P49721 201 aa10.51□□□□□ -0.73
TRIM56-202ENST00000412507 CD164Q04900 197 aa10.51□□□□□ -0.73
TRIM56-202ENST00000412507 COX6CP09669 75 aa10.5□□□□□ -0.73
TRIM56-202ENST00000412507 H0YGX0 51 aa10.47□□□□□ -0.73
TRIM56-202ENST00000412507 TAX1BP3O14907 124 aa10.47□□□□□ -0.73
TRIM56-202ENST00000412507 LYRM7Q5U5X0 104 aa10.47□□□□□ -0.73
TRIM56-202ENST00000412507 C9orf118A6NHY6 69 aa10.46□□□□□ -0.73
TRIM56-202ENST00000412507 F8WEM9 126 aa10.46□□□□□ -0.73
TRIM56-202ENST00000412507 TRIAP1O43715 76 aa10.46□□□□□ -0.73
TRIM56-202ENST00000412507 SCGB1C2P0DMR2 95 aa10.45□□□□□ -0.74
TRIM56-202ENST00000412507 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.45□□□□□ -0.74
TRIM56-202ENST00000412507 H3BUT2 72 aa10.43□□□□□ -0.74
TRIM56-202ENST00000412507 SNCGO76070 127 aa10.43□□□□□ -0.74
TRIM56-202ENST00000412507 Q5XG85 94 aa10.41□□□□□ -0.74
TRIM56-202ENST00000412507 NAA38Q9BRA0 125 aaKnown RBP10.4□□□□□ -0.74
TRIM56-202ENST00000412507 A0A1B0GX51 115 aa10.39□□□□□ -0.75
TRIM56-202ENST00000412507 FABP2P12104 132 aa10.39□□□□□ -0.75
TRIM56-202ENST00000412507 IGLV8-61A0A075B6I0 122 aa10.38□□□□□ -0.75
TRIM56-202ENST00000412507 A0A0U1RQV1 116 aa10.38□□□□□ -0.75
TRIM56-202ENST00000412507 A0A1W2PPM0 123 aa10.38□□□□□ -0.75
TRIM56-202ENST00000412507 ASB16-AS1Q495Z4 193 aa10.38□□□□□ -0.75
TRIM56-202ENST00000412507 OCIAD2Q56VL3 154 aa10.38□□□□□ -0.75
TRIM56-202ENST00000412507 XP32Q5T750 250 aa10.38□□□□□ -0.75
TRIM56-202ENST00000412507 PPDPFLQ8WWR9 84 aa10.38□□□□□ -0.75
TRIM56-202ENST00000412507 FAM218AQ96MZ4 157 aa10.38□□□□□ -0.75
TRIM56-202ENST00000412507 C1orf195Q5TG92 126 aa10.37□□□□□ -0.75
TRIM56-202ENST00000412507 Q6JHZ5 121 aa10.37□□□□□ -0.75
TRIM56-202ENST00000412507 TRBV20-1A0A075B6N2 111 aa10.36□□□□□ -0.75
TRIM56-202ENST00000412507 IGFL1Q6UW32 110 aa10.36□□□□□ -0.75
TRIM56-202ENST00000412507 C9orf92A6NGG3 77 aa10.35□□□□□ -0.75
TRIM56-202ENST00000412507 SEC61BP60468 96 aaKnown RBP10.35□□□□□ -0.75
TRIM56-202ENST00000412507 CLEC2BQ92478 149 aa10.35□□□□□ -0.75
TRIM56-202ENST00000412507 ATXN8Q156A1 80 aa10.34□□□□□ -0.75
TRIM56-202ENST00000412507 LST1O00453 97 aa10.33□□□□□ -0.76
TRIM56-202ENST00000412507 TCL1BO95988 128 aa10.33□□□□□ -0.76
TRIM56-202ENST00000412507 DNAL4O96015 105 aa10.32□□□□□ -0.76
TRIM56-202ENST00000412507 TRACP01848 142 aa10.32□□□□□ -0.76
TRIM56-202ENST00000412507 FAT4Q6V0I7 4981 aa10.32□□□□□ -0.76
TRIM56-202ENST00000412507 GHRHP01286 108 aa10.31□□□□□ -0.76
TRIM56-202ENST00000412507 SPCS1Q9Y6A9 102 aa10.31□□□□□ -0.76
TRIM56-202ENST00000412507 TRBV7-7A0A0K0K1E9 115 aa10.3□□□□□ -0.76
TRIM56-202ENST00000412507 KRTAP4-1Q9BYQ7 146 aa10.29□□□□□ -0.76
TRIM56-202ENST00000412507 H3BQ85 93 aa10.27□□□□□ -0.77
TRIM56-202ENST00000412507 GTF2H5Q6ZYL4 71 aa10.27□□□□□ -0.77
TRIM56-202ENST00000412507 NDUFV3P56181 108 aaKnown RBP10.26□□□□□ -0.77
TRIM56-202ENST00000412507 K7EP34 96 aa10.25□□□□□ -0.77
TRIM56-202ENST00000412507 ORMDL1Q9P0S3 153 aa10.24□□□□□ -0.77
TRIM56-202ENST00000412507 H3BMG7 143 aa10.21□□□□□ -0.77
TRIM56-202ENST00000412507 TMEM256-PLSCR3K7ERE1 68 aa10.19□□□□□ -0.78
TRIM56-202ENST00000412507 PCOTHQ58A44 107 aa10.19□□□□□ -0.78
TRIM56-202ENST00000412507 LCE2AQ5TA79 106 aaPredicted RBP10.19□□□□□ -0.78
TRIM56-202ENST00000412507 C9JAW5 83 aa10.18□□□□□ -0.78
TRIM56-202ENST00000412507 Q6Q795 121 aa10.18□□□□□ -0.78
TRIM56-202ENST00000412507 A0A1B0GV90 55 aa10.17□□□□□ -0.78
TRIM56-202ENST00000412507 BAALC-AS2P0C853 105 aa10.17□□□□□ -0.78
TRIM56-202ENST00000412507 TEN1Q86WV5 123 aa10.17□□□□□ -0.78
TRIM56-202ENST00000412507 H3BT86 120 aa10.16□□□□□ -0.78
TRIM56-202ENST00000412507 UBE2V1Q13404 147 aa10.14□□□□□ -0.79
TRIM56-202ENST00000412507 SS18L2Q9UHA2 77 aa10.14□□□□□ -0.79
TRIM56-202ENST00000412507 A0A1B0GV72 72 aa10.12□□□□□ -0.79
TRIM56-202ENST00000412507 A0A087WSZ3 146 aa10.11□□□□□ -0.79
TRIM56-202ENST00000412507 RPL37P61927 97 aaKnown RBP10.11□□□□□ -0.79
TRIM56-202ENST00000412507 ANKRD29Q8N6D5 301 aa10.11□□□□□ -0.79
TRIM56-202ENST00000412507 A0A1W2PNM2 257 aa10.1□□□□□ -0.79
TRIM56-202ENST00000412507 F8W1H4 67 aa10.1□□□□□ -0.79
TRIM56-202ENST00000412507 MTURNQ8N3F0 131 aa10.08□□□□□ -0.8
TRIM56-202ENST00000412507 PRO0461Q9UI25 63 aa10.08□□□□□ -0.8
TRIM56-202ENST00000412507 OBSCN-AS1Q96MR7 158 aa10.07□□□□□ -0.8
TRIM56-202ENST00000412507 JMJD7-PLA2G4BH0Y9G9 81 aa10.06□□□□□ -0.8
TRIM56-202ENST00000412507 Q96NJ1 140 aa10.04□□□□□ -0.8
TRIM56-202ENST00000412507 SMCPP49901 116 aaPredicted RBP10.03□□□□□ -0.8
TRIM56-202ENST00000412507 TRBV7-4A0A0J9YYF1 115 aa10.02□□□□□ -0.81
TRIM56-202ENST00000412507 RBM3P98179 157 aaKnown RBP10.01□□□□□ -0.81
TRIM56-202ENST00000412507 CCKP06307 115 aa9.99□□□□□ -0.81
TRIM56-202ENST00000412507 DSCR8Q96T75 97 aa9.99□□□□□ -0.81
TRIM56-202ENST00000412507 KRTAP19-2Q3LHN2 52 aa9.98□□□□□ -0.81
TRIM56-202ENST00000412507 LCE2CQ5TA81 110 aa9.98□□□□□ -0.81
TRIM56-202ENST00000412507 PDE6GP18545 87 aa9.97□□□□□ -0.81
TRIM56-202ENST00000412507 C21orf62-AS1Q17RA5 79 aa9.97□□□□□ -0.81
TRIM56-202ENST00000412507 Q75L30 129 aa9.97□□□□□ -0.81
TRIM56-202ENST00000412507 SIGMAR1Q99720 223 aa9.96□□□□□ -0.82
TRIM56-202ENST00000412507 KRTAP9-2Q9BYQ4 174 aa9.96□□□□□ -0.82
TRIM56-202ENST00000412507 VPS25Q9BRG1 176 aa9.94□□□□□ -0.82
TRIM56-202ENST00000412507 IGKV4-1P06312 121 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms