RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 Q6JHZ5 121 aa7.92□□□□□ -1.14
CBX3-203ENST00000409747 Q6ZQY7 126 aa7.91□□□□□ -1.14
CBX3-203ENST00000409747 HIST3H2BBQ8N257 126 aa7.91□□□□□ -1.14
CBX3-203ENST00000409747 HIST1H2BLQ99880 126 aa7.91□□□□□ -1.14
CBX3-203ENST00000409747 MT1HP80294 61 aa7.9□□□□□ -1.14
CBX3-203ENST00000409747 CLEC2BQ92478 149 aa7.89□□□□□ -1.15
CBX3-203ENST00000409747 BVES-AS1Q5T3Y7 98 aa7.87□□□□□ -1.15
CBX3-203ENST00000409747 PPDPFLQ8WWR9 84 aa7.87□□□□□ -1.15
CBX3-203ENST00000409747 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.86□□□□□ -1.15
CBX3-203ENST00000409747 TRBV7-7A0A0K0K1E9 115 aa7.86□□□□□ -1.15
CBX3-203ENST00000409747 S100A6P06703 90 aa7.85□□□□□ -1.15
CBX3-203ENST00000409747 OCIAD2Q56VL3 154 aa7.85□□□□□ -1.15
CBX3-203ENST00000409747 IGFL1Q6UW32 110 aa7.85□□□□□ -1.15
CBX3-203ENST00000409747 HIST1H4GQ99525 98 aa7.84□□□□□ -1.15
CBX3-203ENST00000409747 SCGB1D1O95968 90 aa7.83□□□□□ -1.16
CBX3-203ENST00000409747 COX6B2Q6YFQ2 88 aa7.83□□□□□ -1.16
CBX3-203ENST00000409747 C12orf57Q99622 126 aa7.83□□□□□ -1.16
CBX3-203ENST00000409747 SNHG12Q9BXW3 62 aa7.82□□□□□ -1.16
CBX3-203ENST00000409747 FSIP2Q5CZC0 6907 aa7.81□□□□□ -1.16
CBX3-203ENST00000409747 SNCGO76070 127 aa7.8□□□□□ -1.16
CBX3-203ENST00000409747 M0R2T5 61 aa7.79□□□□□ -1.16
CBX3-203ENST00000409747 COX8AP10176 69 aa7.79□□□□□ -1.16
CBX3-203ENST00000409747 CRCT1Q9UGL9 99 aa7.78□□□□□ -1.16
CBX3-203ENST00000409747 LST1O00453 97 aa7.78□□□□□ -1.16
CBX3-203ENST00000409747 DLEU1O43261 78 aa7.78□□□□□ -1.16
CBX3-203ENST00000409747 S100A1P23297 94 aa7.78□□□□□ -1.16
CBX3-203ENST00000409747 LORP23490 312 aaPredicted RBP7.78□□□□□ -1.16
CBX3-203ENST00000409747 OBSCN-AS1Q96MR7 158 aa7.78□□□□□ -1.16
CBX3-203ENST00000409747 KRTAP10-6P60371 365 aaPredicted RBP7.77□□□□□ -1.17
CBX3-203ENST00000409747 ATP11AUNQ6ZP68 121 aa7.77□□□□□ -1.17
CBX3-203ENST00000409747 Q75L30 129 aa7.77□□□□□ -1.17
CBX3-203ENST00000409747 SS18L2Q9UHA2 77 aa7.77□□□□□ -1.17
CBX3-203ENST00000409747 RAB37Q96AX2 223 aa7.76□□□□□ -1.17
CBX3-203ENST00000409747 H3BUT2 72 aa7.75□□□□□ -1.17
CBX3-203ENST00000409747 H0YGX0 51 aa7.75□□□□□ -1.17
CBX3-203ENST00000409747 Q6Q795 121 aa7.74□□□□□ -1.17
CBX3-203ENST00000409747 FLGP20930 4061 aaPredicted RBP7.74□□□□□ -1.17
CBX3-203ENST00000409747 CFC1P0CG37 223 aa7.73□□□□□ -1.17
CBX3-203ENST00000409747 A0A0B4J2C4 111 aa7.72□□□□□ -1.17
CBX3-203ENST00000409747 GHRHP01286 108 aa7.72□□□□□ -1.17
CBX3-203ENST00000409747 HIGD1BQ9P298 99 aa7.72□□□□□ -1.17
CBX3-203ENST00000409747 TEN1Q86WV5 123 aa7.72□□□□□ -1.17
CBX3-203ENST00000409747 NDUFV3P56181 108 aaKnown RBP7.7□□□□□ -1.18
CBX3-203ENST00000409747 C14orf144Q96I85 54 aa7.69□□□□□ -1.18
CBX3-203ENST00000409747 Q96NJ1 140 aa7.69□□□□□ -1.18
CBX3-203ENST00000409747 A0A1B0GX51 115 aa7.68□□□□□ -1.18
CBX3-203ENST00000409747 SPATA45Q537H7 98 aa7.68□□□□□ -1.18
CBX3-203ENST00000409747 PAM16Q9Y3D7 125 aa7.68□□□□□ -1.18
CBX3-203ENST00000409747 TMEM238LA0A1B0GVL6 79 aa7.67□□□□□ -1.18
CBX3-203ENST00000409747 A6NJY4 79 aa7.67□□□□□ -1.18
CBX3-203ENST00000409747 FAM218AQ96MZ4 157 aa7.67□□□□□ -1.18
CBX3-203ENST00000409747 VAMP8Q9BV40 100 aa7.66□□□□□ -1.18
CBX3-203ENST00000409747 A0A087WSZ3 146 aa7.66□□□□□ -1.18
CBX3-203ENST00000409747 C20orf166-AS1Q96NR2 134 aa7.66□□□□□ -1.18
CBX3-203ENST00000409747 H3BMG7 143 aa7.65□□□□□ -1.18
CBX3-203ENST00000409747 PRO1854Q9UHT4 67 aa7.65□□□□□ -1.18
CBX3-203ENST00000409747 C2orf91Q6ZV80 131 aa7.64□□□□□ -1.19
CBX3-203ENST00000409747 CEND1Q8N111 149 aa7.64□□□□□ -1.19
CBX3-203ENST00000409747 FABP2P12104 132 aa7.64□□□□□ -1.19
CBX3-203ENST00000409747 A8MUU9 505 aa7.63□□□□□ -1.19
CBX3-203ENST00000409747 TRBV20-1A0A075B6N2 111 aa7.6□□□□□ -1.19
CBX3-203ENST00000409747 H3BQ85 93 aa7.59□□□□□ -1.19
CBX3-203ENST00000409747 DNAL4O96015 105 aa7.59□□□□□ -1.19
CBX3-203ENST00000409747 SIGMAR1Q99720 223 aa7.59□□□□□ -1.19
CBX3-203ENST00000409747 TRIAP1O43715 76 aa7.58□□□□□ -1.2
CBX3-203ENST00000409747 FXYD2P54710 66 aa7.58□□□□□ -1.2
CBX3-203ENST00000409747 DSCR10P59022 87 aa7.57□□□□□ -1.2
CBX3-203ENST00000409747 A0A1W2PNM2 257 aa7.56□□□□□ -1.2
CBX3-203ENST00000409747 ANKRD29Q8N6D5 301 aa7.56□□□□□ -1.2
CBX3-203ENST00000409747 ORMDL1Q9P0S3 153 aa7.56□□□□□ -1.2
CBX3-203ENST00000409747 TRBV7-4A0A0J9YYF1 115 aa7.55□□□□□ -1.2
CBX3-203ENST00000409747 LINC00313P59037 77 aa7.54□□□□□ -1.2
CBX3-203ENST00000409747 IGKV4-1P06312 121 aa7.53□□□□□ -1.2
CBX3-203ENST00000409747 PSMB2P49721 201 aa7.53□□□□□ -1.2
CBX3-203ENST00000409747 TMEM256-PLSCR3K7ERE1 68 aa7.52□□□□□ -1.2
CBX3-203ENST00000409747 COX6CP09669 75 aa7.52□□□□□ -1.2
CBX3-203ENST00000409747 HSD52Q0P140 79 aa7.52□□□□□ -1.2
CBX3-203ENST00000409747 A0A1B0GV72 72 aa7.5□□□□□ -1.21
CBX3-203ENST00000409747 TRACP01848 142 aa7.49□□□□□ -1.21
CBX3-203ENST00000409747 CCKP06307 115 aa7.49□□□□□ -1.21
CBX3-203ENST00000409747 KRTAP16-1A8MUX0 517 aa7.48□□□□□ -1.21
CBX3-203ENST00000409747 K7ERJ3 54 aa7.48□□□□□ -1.21
CBX3-203ENST00000409747 FAM236DA0A1B0GTK5 79 aa7.47□□□□□ -1.21
CBX3-203ENST00000409747 FAM236CP0DP71 79 aa7.47□□□□□ -1.21
CBX3-203ENST00000409747 UBE2V1Q13404 147 aa7.47□□□□□ -1.21
CBX3-203ENST00000409747 LINC00472Q9H8W2 130 aa7.47□□□□□ -1.21
CBX3-203ENST00000409747 PYY3Q5JQD4 70 aa7.44□□□□□ -1.22
CBX3-203ENST00000409747 KRTAP9-8Q9BYQ0 159 aa7.44□□□□□ -1.22
CBX3-203ENST00000409747 RBM12B-AS1Q9P1G2 102 aa7.44□□□□□ -1.22
CBX3-203ENST00000409747 IGHV6-1A0A0B4J1U7 121 aa7.44□□□□□ -1.22
CBX3-203ENST00000409747 DEFB116Q30KQ4 102 aa7.44□□□□□ -1.22
CBX3-203ENST00000409747 NOTCH2NLQ7Z3S9 236 aa7.42□□□□□ -1.22
CBX3-203ENST00000409747 C8orf87E5RJ46 101 aa7.41□□□□□ -1.22
CBX3-203ENST00000409747 UQCR10Q9UDW1 63 aa7.41□□□□□ -1.22
CBX3-203ENST00000409747 C21orf62-AS1Q17RA5 79 aa7.41□□□□□ -1.22
CBX3-203ENST00000409747 DSCR8Q96T75 97 aa7.41□□□□□ -1.22
CBX3-203ENST00000409747 VPS25Q9BRG1 176 aa7.41□□□□□ -1.22
CBX3-203ENST00000409747 RBM3P98179 157 aaKnown RBP7.4□□□□□ -1.23
CBX3-203ENST00000409747 A0A1B0GVX0 72 aa7.39□□□□□ -1.23
CBX3-203ENST00000409747 SCGB1C2P0DMR2 95 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms