RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 DNAH12Q6ZR08 3092 aa7.61□□□□□ -1.19
SHANK2-203ENST00000409161 TEP1Q99973 2627 aaKnown RBP7.61□□□□□ -1.19
SHANK2-203ENST00000409161 ROMO1P60602 79 aa7.61□□□□□ -1.19
SHANK2-203ENST00000409161 SPINK7P58062 85 aa7.6□□□□□ -1.19
SHANK2-203ENST00000409161 ITPR2Q14571 2701 aa7.6□□□□□ -1.19
SHANK2-203ENST00000409161 MMP24-AS1A0A0U1RRL7 71 aa7.59□□□□□ -1.19
SHANK2-203ENST00000409161 APCP25054 2843 aa7.56□□□□□ -1.2
SHANK2-203ENST00000409161 RPL37P61927 97 aaKnown RBP7.55□□□□□ -1.2
SHANK2-203ENST00000409161 KRTAP16-1A8MUX0 517 aa7.55□□□□□ -1.2
SHANK2-203ENST00000409161 SMR3BP02814 79 aaPredicted RBP7.55□□□□□ -1.2
SHANK2-203ENST00000409161 R4GN34 69 aa7.55□□□□□ -1.2
SHANK2-203ENST00000409161 PRAC1Q96KF2 57 aa7.54□□□□□ -1.2
SHANK2-203ENST00000409161 A0A096LNT2 108 aa7.54□□□□□ -1.2
SHANK2-203ENST00000409161 BAHCC1Q9P281 2608 aa7.53□□□□□ -1.2
SHANK2-203ENST00000409161 Q5W150 140 aa7.53□□□□□ -1.2
SHANK2-203ENST00000409161 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.53□□□□□ -1.2
SHANK2-203ENST00000409161 MAP1AP78559 2803 aaPredicted RBP7.53□□□□□ -1.2
SHANK2-203ENST00000409161 ZNF292O60281 2723 aa7.53□□□□□ -1.2
SHANK2-203ENST00000409161 LINC00472Q9H8W2 130 aa7.51□□□□□ -1.21
SHANK2-203ENST00000409161 SPRR1AP35321 89 aa7.51□□□□□ -1.21
SHANK2-203ENST00000409161 M0R2T5 61 aa7.5□□□□□ -1.21
SHANK2-203ENST00000409161 CASC10Q5T4H9 136 aa7.5□□□□□ -1.21
SHANK2-203ENST00000409161 SPRR1BP22528 89 aa7.48□□□□□ -1.21
SHANK2-203ENST00000409161 PLAC8Q9NZF1 115 aa7.47□□□□□ -1.21
SHANK2-203ENST00000409161 SETXQ7Z333 2677 aaKnown RBP7.45□□□□□ -1.22
SHANK2-203ENST00000409161 H1FX-AS1Q4G0G2 97 aa7.45□□□□□ -1.22
SHANK2-203ENST00000409161 Q6ZR54 194 aa7.43□□□□□ -1.22
SHANK2-203ENST00000409161 CYSTM1Q9H1C7 97 aa7.43□□□□□ -1.22
SHANK2-203ENST00000409161 CFAP54Q96N23 3096 aa7.43□□□□□ -1.22
SHANK2-203ENST00000409161 KRTAP10-3P60369 221 aa7.43□□□□□ -1.22
SHANK2-203ENST00000409161 SEC61BP60468 96 aaKnown RBP7.41□□□□□ -1.22
SHANK2-203ENST00000409161 PCNTO95613 3336 aa7.41□□□□□ -1.22
SHANK2-203ENST00000409161 NSD1Q96L73 2696 aaPredicted RBP7.4□□□□□ -1.23
SHANK2-203ENST00000409161 NBEAL2Q6ZNJ1 2754 aa7.39□□□□□ -1.23
SHANK2-203ENST00000409161 UTP20O75691 2785 aaKnown RBP7.39□□□□□ -1.23
SHANK2-203ENST00000409161 ITPR1Q14643 2758 aa7.37□□□□□ -1.23
SHANK2-203ENST00000409161 GOLGB1Q14789 3259 aaKnown RBP7.36□□□□□ -1.23
SHANK2-203ENST00000409161 C5orf42Q9H799 3197 aa7.36□□□□□ -1.23
SHANK2-203ENST00000409161 M0QZ58 72 aa7.33□□□□□ -1.24
SHANK2-203ENST00000409161 SPATA8Q6RVD6 105 aa7.32□□□□□ -1.24
SHANK2-203ENST00000409161 IGSF10Q6WRI0 2623 aa7.32□□□□□ -1.24
SHANK2-203ENST00000409161 KRTAP26-1Q6PEX3 210 aa7.3□□□□□ -1.24
SHANK2-203ENST00000409161 PLAC4Q8WY50 150 aa7.3□□□□□ -1.24
SHANK2-203ENST00000409161 OXTP01178 125 aa7.29□□□□□ -1.24
SHANK2-203ENST00000409161 PANO1I0J062 215 aa7.27□□□□□ -1.24
SHANK2-203ENST00000409161 A0A0C4DFX4 3053 aa7.27□□□□□ -1.25
SHANK2-203ENST00000409161 UBR5O95071 2799 aaPredicted RBP7.26□□□□□ -1.25
SHANK2-203ENST00000409161 A0A087X002 238 aa7.25□□□□□ -1.25
SHANK2-203ENST00000409161 Q8NDZ9 215 aa7.25□□□□□ -1.25
SHANK2-203ENST00000409161 KRTAP1-3Q8IUG1 177 aa7.25□□□□□ -1.25
SHANK2-203ENST00000409161 KRTAP25-1Q3LHN0 102 aa7.25□□□□□ -1.25
SHANK2-203ENST00000409161 ADM2Q7Z4H4 148 aa7.22□□□□□ -1.25
SHANK2-203ENST00000409161 KRTAP1-1Q07627 177 aa7.21□□□□□ -1.26
SHANK2-203ENST00000409161 A6NN06 94 aa7.21□□□□□ -1.26
SHANK2-203ENST00000409161 KRTAP29-1A8MX34 341 aaPredicted RBP7.19□□□□□ -1.26
SHANK2-203ENST00000409161 LAMA2P24043 3122 aaKnown RBP7.19□□□□□ -1.26
SHANK2-203ENST00000409161 MGAQ8IWI9 3026 aa7.18□□□□□ -1.26
SHANK2-203ENST00000409161 TRANK1O15050 2925 aa7.18□□□□□ -1.26
SHANK2-203ENST00000409161 UTRNP46939 3433 aa7.17□□□□□ -1.26
SHANK2-203ENST00000409161 RPS29P62273 56 aaKnown RBP7.16□□□□□ -1.26
SHANK2-203ENST00000409161 KRTAP4-16G5E9R7 235 aaPredicted RBP7.15□□□□□ -1.27
SHANK2-203ENST00000409161 DSPP15924 2871 aaKnown RBP7.11□□□□□ -1.27
SHANK2-203ENST00000409161 LRBAP50851 2863 aa7.11□□□□□ -1.27
SHANK2-203ENST00000409161 FRYQ5TBA9 3013 aa7.11□□□□□ -1.27
SHANK2-203ENST00000409161 LCE6AA0A183 80 aa7.1□□□□□ -1.27
SHANK2-203ENST00000409161 Q5VSD8 79 aa7.09□□□□□ -1.27
SHANK2-203ENST00000409161 C20orf166-AS1Q96NR2 134 aa7.09□□□□□ -1.27
SHANK2-203ENST00000409161 FRYLO94915 3013 aa7.07□□□□□ -1.28
SHANK2-203ENST00000409161 NDUFAF8A1L188 74 aa7.06□□□□□ -1.28
SHANK2-203ENST00000409161 CHD7Q9P2D1 2997 aa7.03□□□□□ -1.28
SHANK2-203ENST00000409161 VPS13AQ96RL7 3174 aa7.02□□□□□ -1.29
SHANK2-203ENST00000409161 A8MUU9 505 aa7.01□□□□□ -1.29
SHANK2-203ENST00000409161 KRTAP1-5Q9BYS1 174 aa7.01□□□□□ -1.29
SHANK2-203ENST00000409161 KALRNO60229 2985 aa7.01□□□□□ -1.29
SHANK2-203ENST00000409161 PP632Q6XCG6 107 aa6.99□□□□□ -1.29
SHANK2-203ENST00000409161 KRTAP10-1P60331 282 aa6.95□□□□□ -1.3
SHANK2-203ENST00000409161 TNP1P09430 55 aa6.94□□□□□ -1.3
SHANK2-203ENST00000409161 CHD9Q3L8U1 2897 aa6.94□□□□□ -1.3
SHANK2-203ENST00000409161 NOTCH2NLQ7Z3S9 236 aa6.94□□□□□ -1.3
SHANK2-203ENST00000409161 ASH1LQ9NR48 2969 aaKnown RBP6.94□□□□□ -1.3
SHANK2-203ENST00000409161 TRIOO75962 3097 aa6.92□□□□□ -1.3
SHANK2-203ENST00000409161 FLNCQ14315 2725 aa6.91□□□□□ -1.3
SHANK2-203ENST00000409161 HIVEP1P15822 2718 aa6.89□□□□□ -1.31
SHANK2-203ENST00000409161 TENM1Q9UKZ4 2725 aa6.89□□□□□ -1.31
SHANK2-203ENST00000409161 NIPBLQ6KC79 2804 aaeCLIP6.89□□□□□ -1.31
SHANK2-203ENST00000409161 KRTAP10-2P60368 255 aa6.89□□□□□ -1.31
SHANK2-203ENST00000409161 A8MU10 97 aa6.88□□□□□ -1.31
SHANK2-203ENST00000409161 KRTAP11-1Q8IUC1 163 aa6.88□□□□□ -1.31
SHANK2-203ENST00000409161 WDFY4Q6ZS81 3184 aa6.87□□□□□ -1.31
SHANK2-203ENST00000409161 NF1P21359 2839 aa6.87□□□□□ -1.31
SHANK2-203ENST00000409161 TENM3Q9P273 2699 aa6.86□□□□□ -1.31
SHANK2-203ENST00000409161 C10orf95Q9H7T3 257 aa6.85□□□□□ -1.31
SHANK2-203ENST00000409161 TACC2O95359 2948 aa6.82□□□□□ -1.32
SHANK2-203ENST00000409161 CELSR2Q9HCU4 2923 aa6.81□□□□□ -1.32
SHANK2-203ENST00000409161 PRUNE2Q8WUY3 3088 aa6.81□□□□□ -1.32
SHANK2-203ENST00000409161 Q6ZRN7 208 aaPredicted RBP6.77□□□□□ -1.33
SHANK2-203ENST00000409161 COL12A1Q99715 3063 aa6.77□□□□□ -1.33
SHANK2-203ENST00000409161 FREM2Q5SZK8 3169 aa6.77□□□□□ -1.33
SHANK2-203ENST00000409161 TGP01266 2768 aa6.76□□□□□ -1.33
SHANK2-203ENST00000409161 KRTAP13-1Q8IUC0 172 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms