RNA–Protein interactions for RNA: ENST00000407142.5

PPM1F-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PPM1F, Length 5,587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-203ENST00000407142 CFAP46Q8IYW2 2715 aa9.32□□□□□ -0.92
PPM1F-203ENST00000407142 LINC00472Q9H8W2 130 aa9.3□□□□□ -0.92
PPM1F-203ENST00000407142 OXTP01178 125 aa9.29□□□□□ -0.92
PPM1F-203ENST00000407142 S4R3F8 94 aa9.29□□□□□ -0.92
PPM1F-203ENST00000407142 SEC61BP60468 96 aaKnown RBP9.29□□□□□ -0.92
PPM1F-203ENST00000407142 PRRC2CQ9Y520 2896 aaKnown RBP9.28□□□□□ -0.92
PPM1F-203ENST00000407142 KRTAP1-5Q9BYS1 174 aa9.27□□□□□ -0.92
PPM1F-203ENST00000407142 DNAH12Q6ZR08 3092 aa9.26□□□□□ -0.93
PPM1F-203ENST00000407142 KRTAP10-1P60331 282 aa9.24□□□□□ -0.93
PPM1F-203ENST00000407142 BPTFQ12830 3046 aa9.21□□□□□ -0.94
PPM1F-203ENST00000407142 KRTAP10-2P60368 255 aa9.2□□□□□ -0.94
PPM1F-203ENST00000407142 ROMO1P60602 79 aa9.19□□□□□ -0.94
PPM1F-203ENST00000407142 RPL37P61927 97 aaKnown RBP9.17□□□□□ -0.94
PPM1F-203ENST00000407142 KRTAP26-1Q6PEX3 210 aa9.17□□□□□ -0.94
PPM1F-203ENST00000407142 R4GN34 69 aa9.14□□□□□ -0.95
PPM1F-203ENST00000407142 Q6ZR54 194 aa9.12□□□□□ -0.95
PPM1F-203ENST00000407142 CEP350Q5VT06 3117 aa9.12□□□□□ -0.95
PPM1F-203ENST00000407142 H1FX-AS1Q4G0G2 97 aa9.12□□□□□ -0.95
PPM1F-203ENST00000407142 ASB16-AS1Q495Z4 193 aa9.11□□□□□ -0.95
PPM1F-203ENST00000407142 CHD7Q9P2D1 2997 aa9.08□□□□□ -0.96
PPM1F-203ENST00000407142 UTRNP46939 3433 aa9.08□□□□□ -0.96
PPM1F-203ENST00000407142 STAB1Q9NY15 2570 aa9.08□□□□□ -0.96
PPM1F-203ENST00000407142 CHD9Q3L8U1 2897 aa9.03□□□□□ -0.96
PPM1F-203ENST00000407142 KRTAP21-3Q3LHN1 58 aa9.03□□□□□ -0.96
PPM1F-203ENST00000407142 ZNF292O60281 2723 aa9.02□□□□□ -0.97
PPM1F-203ENST00000407142 TEP1Q99973 2627 aaKnown RBP9□□□□□ -0.97
PPM1F-203ENST00000407142 CENPEQ02224 2701 aa9□□□□□ -0.97
PPM1F-203ENST00000407142 KRTAP29-1A8MX34 341 aaPredicted RBP9□□□□□ -0.97
PPM1F-203ENST00000407142 BAHCC1Q9P281 2608 aa8.98□□□□□ -0.97
PPM1F-203ENST00000407142 M0QZ58 72 aa8.98□□□□□ -0.97
PPM1F-203ENST00000407142 SPATA8Q6RVD6 105 aa8.97□□□□□ -0.97
PPM1F-203ENST00000407142 SETXQ7Z333 2677 aaKnown RBP8.96□□□□□ -0.97
PPM1F-203ENST00000407142 TEX15Q9BXT5 2789 aa8.96□□□□□ -0.98
PPM1F-203ENST00000407142 PANO1I0J062 215 aa8.95□□□□□ -0.98
PPM1F-203ENST00000407142 RPS29P62273 56 aaKnown RBP8.94□□□□□ -0.98
PPM1F-203ENST00000407142 COL6A5A8TX70 2615 aa8.94□□□□□ -0.98
PPM1F-203ENST00000407142 UNC79Q9P2D8 2635 aa8.94□□□□□ -0.98
PPM1F-203ENST00000407142 KRTAP4-16G5E9R7 235 aaPredicted RBP8.93□□□□□ -0.98
PPM1F-203ENST00000407142 PCNTO95613 3336 aa8.9□□□□□ -0.98
PPM1F-203ENST00000407142 A6NN06 94 aa8.89□□□□□ -0.99
PPM1F-203ENST00000407142 KRTAP16-1A8MUX0 517 aa8.89□□□□□ -0.99
PPM1F-203ENST00000407142 ADM2Q7Z4H4 148 aa8.88□□□□□ -0.99
PPM1F-203ENST00000407142 C5orf42Q9H799 3197 aa8.86□□□□□ -0.99
PPM1F-203ENST00000407142 A0A087X002 238 aa8.85□□□□□ -0.99
PPM1F-203ENST00000407142 KRTAP25-1Q3LHN0 102 aa8.85□□□□□ -0.99
PPM1F-203ENST00000407142 Q6ZRN7 208 aaPredicted RBP8.84□□□□□ -0.99
PPM1F-203ENST00000407142 IGSF10Q6WRI0 2623 aa8.84□□□□□ -0.99
PPM1F-203ENST00000407142 TRANK1O15050 2925 aa8.82□□□□□ -1
PPM1F-203ENST00000407142 CHD6Q8TD26 2715 aa8.8□□□□□ -1
PPM1F-203ENST00000407142 HTTP42858 3142 aa8.8□□□□□ -1
PPM1F-203ENST00000407142 NOTCH2NLQ7Z3S9 236 aa8.78□□□□□ -1
PPM1F-203ENST00000407142 NBEAL1Q6ZS30 2694 aa8.77□□□□□ -1.01
PPM1F-203ENST00000407142 PLAC4Q8WY50 150 aa8.77□□□□□ -1.01
PPM1F-203ENST00000407142 AKAP13Q12802 2813 aa8.77□□□□□ -1.01
PPM1F-203ENST00000407142 MGAQ8IWI9 3026 aa8.77□□□□□ -1.01
PPM1F-203ENST00000407142 FLG2Q5D862 2391 aaPredicted RBP8.74□□□□□ -1.01
PPM1F-203ENST00000407142 A8MU10 97 aa8.73□□□□□ -1.01
PPM1F-203ENST00000407142 NOTCH1P46531 2555 aa8.72□□□□□ -1.01
PPM1F-203ENST00000407142 RANBP2P49792 3224 aaKnown RBP8.71□□□□□ -1.01
PPM1F-203ENST00000407142 GCN1Q92616 2671 aaKnown RBP8.66□□□□□ -1.02
PPM1F-203ENST00000407142 KRTAP11-1Q8IUC1 163 aa8.66□□□□□ -1.02
PPM1F-203ENST00000407142 NDUFAF8A1L188 74 aa8.65□□□□□ -1.03
PPM1F-203ENST00000407142 DSPP15924 2871 aaKnown RBP8.62□□□□□ -1.03
PPM1F-203ENST00000407142 C20orf166-AS1Q96NR2 134 aa8.61□□□□□ -1.03
PPM1F-203ENST00000407142 DMBT1Q9UGM3 2413 aaPredicted RBP8.6□□□□□ -1.03
PPM1F-203ENST00000407142 KRTAP13-2Q52LG2 175 aa8.6□□□□□ -1.03
PPM1F-203ENST00000407142 ITPR2Q14571 2701 aa8.6□□□□□ -1.03
PPM1F-203ENST00000407142 NSD1Q96L73 2696 aaPredicted RBP8.58□□□□□ -1.04
PPM1F-203ENST00000407142 A8MUU9 505 aa8.57□□□□□ -1.04
PPM1F-203ENST00000407142 A0A0C4DFX4 3053 aa8.57□□□□□ -1.04
PPM1F-203ENST00000407142 KRTAP13-1Q8IUC0 172 aa8.57□□□□□ -1.04
PPM1F-203ENST00000407142 KRTAP7-1Q8IUC3 87 aa8.57□□□□□ -1.04
PPM1F-203ENST00000407142 UBR5O95071 2799 aaPredicted RBP8.54□□□□□ -1.04
PPM1F-203ENST00000407142 LAMA3Q16787 3333 aa8.54□□□□□ -1.04
PPM1F-203ENST00000407142 KMT2BQ9UMN6 2715 aaPredicted RBP8.51□□□□□ -1.05
PPM1F-203ENST00000407142 MKI67P46013 3256 aaKnown RBP8.51□□□□□ -1.05
PPM1F-203ENST00000407142 MAP1AP78559 2803 aaPredicted RBP8.49□□□□□ -1.05
PPM1F-203ENST00000407142 CFAP54Q96N23 3096 aa8.47□□□□□ -1.05
PPM1F-203ENST00000407142 NBEAL2Q6ZNJ1 2754 aa8.44□□□□□ -1.06
PPM1F-203ENST00000407142 STAB2Q8WWQ8 2551 aa8.43□□□□□ -1.06
PPM1F-203ENST00000407142 WDFY4Q6ZS81 3184 aa8.42□□□□□ -1.06
PPM1F-203ENST00000407142 BRCA2P51587 3418 aa8.4□□□□□ -1.06
PPM1F-203ENST00000407142 ITPR1Q14643 2758 aa8.39□□□□□ -1.07
PPM1F-203ENST00000407142 TNP1P09430 55 aa8.37□□□□□ -1.07
PPM1F-203ENST00000407142 C10orf95Q9H7T3 257 aa8.37□□□□□ -1.07
PPM1F-203ENST00000407142 PRUNE2Q8WUY3 3088 aa8.36□□□□□ -1.07
PPM1F-203ENST00000407142 LAMA2P24043 3122 aaKnown RBP8.35□□□□□ -1.07
PPM1F-203ENST00000407142 HIVEP1P15822 2718 aa8.34□□□□□ -1.07
PPM1F-203ENST00000407142 FRYQ5TBA9 3013 aa8.29□□□□□ -1.08
PPM1F-203ENST00000407142 FLNCQ14315 2725 aa8.27□□□□□ -1.09
PPM1F-203ENST00000407142 UNC80Q8N2C7 3258 aa8.25□□□□□ -1.09
PPM1F-203ENST00000407142 TENM4Q6N022 2769 aa8.22□□□□□ -1.09
PPM1F-203ENST00000407142 PP632Q6XCG6 107 aa8.22□□□□□ -1.09
PPM1F-203ENST00000407142 KRTAP1-4P0C5Y4 121 aa8.21□□□□□ -1.09
PPM1F-203ENST00000407142 XP32Q5T750 250 aa8.2□□□□□ -1.1
PPM1F-203ENST00000407142 TRIOO75962 3097 aa8.2□□□□□ -1.1
PPM1F-203ENST00000407142 XIRP2A4UGR9 3374 aa8.18□□□□□ -1.1
PPM1F-203ENST00000407142 VPS13AQ96RL7 3174 aa8.17□□□□□ -1.1
PPM1F-203ENST00000407142 UTP20O75691 2785 aaKnown RBP8.17□□□□□ -1.1
PPM1F-203ENST00000407142 TPRXLQ17RH7 258 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms