RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 NDUFC1O43677 76 aa8.89□□□□□ -0.99
SCAF4-202ENST00000399804 TNP2Q05952 138 aa8.89□□□□□ -0.99
SCAF4-202ENST00000399804 SMIM29Q86T20 159 aa8.89□□□□□ -0.99
SCAF4-202ENST00000399804 LINC00208Q96KT6 92 aa8.88□□□□□ -0.99
SCAF4-202ENST00000399804 PSORS1C2Q9UIG4 136 aa8.87□□□□□ -0.99
SCAF4-202ENST00000399804 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.87□□□□□ -0.99
SCAF4-202ENST00000399804 TMEM254Q8TBM7 123 aa8.87□□□□□ -0.99
SCAF4-202ENST00000399804 A0A1W2PNM2 257 aa8.86□□□□□ -0.99
SCAF4-202ENST00000399804 ZNF861PO60384 105 aa8.86□□□□□ -0.99
SCAF4-202ENST00000399804 RPL37AP61513 92 aaKnown RBP8.86□□□□□ -0.99
SCAF4-202ENST00000399804 RPS28P62857 69 aaKnown RBP8.86□□□□□ -0.99
SCAF4-202ENST00000399804 ANAPC11Q9NYG5 84 aa8.86□□□□□ -0.99
SCAF4-202ENST00000399804 IGLV5-48A0A075B6I7 105 aa8.84□□□□□ -0.99
SCAF4-202ENST00000399804 OXTP01178 125 aa8.82□□□□□ -1
SCAF4-202ENST00000399804 SPRR1AP35321 89 aa8.82□□□□□ -1
SCAF4-202ENST00000399804 K7EQZ3 153 aa8.82□□□□□ -1
SCAF4-202ENST00000399804 MPLKIPQ8TAP9 179 aa8.8□□□□□ -1
SCAF4-202ENST00000399804 SPACA4Q8TDM5 124 aa8.79□□□□□ -1
SCAF4-202ENST00000399804 H0Y9P7 68 aa8.78□□□□□ -1
SCAF4-202ENST00000399804 CHKB-CPT1BH3BT56 60 aa8.78□□□□□ -1
SCAF4-202ENST00000399804 SPRR4Q96PI1 79 aa8.78□□□□□ -1
SCAF4-202ENST00000399804 ANK3Q12955 4377 aaKnown RBP8.77□□□□□ -1.01
SCAF4-202ENST00000399804 IGLV7-43P04211 117 aa8.77□□□□□ -1.01
SCAF4-202ENST00000399804 PKD1L1Q8TDX9 2849 aa8.76□□□□□ -1.01
SCAF4-202ENST00000399804 hDV103S1A0JD37 113 aa8.76□□□□□ -1.01
SCAF4-202ENST00000399804 ATP5EP56381 51 aaPredicted RBP8.75□□□□□ -1.01
SCAF4-202ENST00000399804 H7BZZ5 65 aa8.74□□□□□ -1.01
SCAF4-202ENST00000399804 PLA2G1BP04054 148 aaKnown RBP8.74□□□□□ -1.01
SCAF4-202ENST00000399804 LIMD2Q9BT23 127 aa8.74□□□□□ -1.01
SCAF4-202ENST00000399804 BRK1Q8WUW1 75 aa8.74□□□□□ -1.01
SCAF4-202ENST00000399804 RETNLBQ9BQ08 111 aa8.74□□□□□ -1.01
SCAF4-202ENST00000399804 SMR3BP02814 79 aaPredicted RBP8.73□□□□□ -1.01
SCAF4-202ENST00000399804 TYMSOSQ8TAI1 123 aa8.73□□□□□ -1.01
SCAF4-202ENST00000399804 SERP1Q9Y6X1 66 aa8.73□□□□□ -1.01
SCAF4-202ENST00000399804 PCOTHQ58A44 107 aa8.73□□□□□ -1.01
SCAF4-202ENST00000399804 A8MWP4 228 aa8.73□□□□□ -1.01
SCAF4-202ENST00000399804 A0A0U1RQV1 116 aa8.72□□□□□ -1.01
SCAF4-202ENST00000399804 TRRAPQ9Y4A5 3859 aa8.7□□□□□ -1.02
SCAF4-202ENST00000399804 PANO1I0J062 215 aa8.7□□□□□ -1.02
SCAF4-202ENST00000399804 C1orf64Q8NEQ6 169 aa8.7□□□□□ -1.02
SCAF4-202ENST00000399804 ZNF469Q96JG9 3925 aaPredicted RBP8.7□□□□□ -1.02
SCAF4-202ENST00000399804 Q5XG85 94 aa8.69□□□□□ -1.02
SCAF4-202ENST00000399804 SSBP3-AS1Q7Z2R9 100 aa8.69□□□□□ -1.02
SCAF4-202ENST00000399804 PRR15Q8IV56 129 aa8.69□□□□□ -1.02
SCAF4-202ENST00000399804 PLAC8Q9NZF1 115 aa8.68□□□□□ -1.02
SCAF4-202ENST00000399804 SMIM26A0A096LP01 95 aa8.68□□□□□ -1.02
SCAF4-202ENST00000399804 KRTAP4-16G5E9R7 235 aaPredicted RBP8.67□□□□□ -1.02
SCAF4-202ENST00000399804 LINC00336Q6ZUF6 198 aa8.67□□□□□ -1.02
SCAF4-202ENST00000399804 Q6ZR54 194 aa8.66□□□□□ -1.02
SCAF4-202ENST00000399804 AKAP9Q99996 3911 aa8.65□□□□□ -1.02
SCAF4-202ENST00000399804 FAM229AH3BQW9 127 aa8.65□□□□□ -1.02
SCAF4-202ENST00000399804 KLKP1Q107X0 134 aa8.65□□□□□ -1.02
SCAF4-202ENST00000399804 KRTAP7-1Q8IUC3 87 aa8.64□□□□□ -1.03
SCAF4-202ENST00000399804 TP53AIP1Q9HCN2 124 aa8.64□□□□□ -1.03
SCAF4-202ENST00000399804 Q6ZRN7 208 aaPredicted RBP8.63□□□□□ -1.03
SCAF4-202ENST00000399804 TRAV22A0A0B4J277 110 aa8.62□□□□□ -1.03
SCAF4-202ENST00000399804 KRTAP10-2P60368 255 aa8.62□□□□□ -1.03
SCAF4-202ENST00000399804 LINC00313P59037 77 aa8.62□□□□□ -1.03
SCAF4-202ENST00000399804 TENM2Q9NT68 2774 aa8.61□□□□□ -1.03
SCAF4-202ENST00000399804 DSCR10P59022 87 aa8.61□□□□□ -1.03
SCAF4-202ENST00000399804 C8orf17Q9NRJ1 99 aa8.6□□□□□ -1.03
SCAF4-202ENST00000399804 SPRR1BP22528 89 aa8.58□□□□□ -1.04
SCAF4-202ENST00000399804 A0A1B0GVX0 72 aa8.58□□□□□ -1.04
SCAF4-202ENST00000399804 MRPL34Q9BQ48 92 aaKnown RBP8.58□□□□□ -1.04
SCAF4-202ENST00000399804 KRTAP11-1Q8IUC1 163 aa8.57□□□□□ -1.04
SCAF4-202ENST00000399804 IGKV2D-30A0A075B6S6 120 aa8.57□□□□□ -1.04
SCAF4-202ENST00000399804 IGKV2-30P06310 120 aa8.57□□□□□ -1.04
SCAF4-202ENST00000399804 TGP01266 2768 aa8.57□□□□□ -1.04
SCAF4-202ENST00000399804 PRO0628Q9UI54 55 aa8.56□□□□□ -1.04
SCAF4-202ENST00000399804 FP248Q71RG6 208 aaPredicted RBP8.56□□□□□ -1.04
SCAF4-202ENST00000399804 KRTAP10-1P60331 282 aa8.55□□□□□ -1.04
SCAF4-202ENST00000399804 IGLV8-61A0A075B6I0 122 aa8.54□□□□□ -1.04
SCAF4-202ENST00000399804 LINC00304Q8N9R0 145 aa8.53□□□□□ -1.04
SCAF4-202ENST00000399804 H3BPC8 53 aa8.53□□□□□ -1.04
SCAF4-202ENST00000399804 C8orf87E5RJ46 101 aa8.52□□□□□ -1.05
SCAF4-202ENST00000399804 FAM229BQ4G0N7 80 aa8.52□□□□□ -1.05
SCAF4-202ENST00000399804 Q96NJ1 140 aa8.51□□□□□ -1.05
SCAF4-202ENST00000399804 OCR1Q9BZK8 76 aa8.51□□□□□ -1.05
SCAF4-202ENST00000399804 PSPHP1O15172 72 aa8.5□□□□□ -1.05
SCAF4-202ENST00000399804 V9GYY9 64 aa8.5□□□□□ -1.05
SCAF4-202ENST00000399804 LCE6AA0A183 80 aa8.47□□□□□ -1.05
SCAF4-202ENST00000399804 DMBT1Q9UGM3 2413 aaPredicted RBP8.46□□□□□ -1.05
SCAF4-202ENST00000399804 KRTAP21-3Q3LHN1 58 aa8.46□□□□□ -1.05
SCAF4-202ENST00000399804 SPAG11AQ6PDA7 123 aa8.46□□□□□ -1.05
SCAF4-202ENST00000399804 SEC61GP60059 68 aa8.46□□□□□ -1.06
SCAF4-202ENST00000399804 PRR26Q8N8Z3 221 aa8.46□□□□□ -1.06
SCAF4-202ENST00000399804 LINC00472Q9H8W2 130 aa8.45□□□□□ -1.06
SCAF4-202ENST00000399804 C1orf195Q5TG92 126 aa8.44□□□□□ -1.06
SCAF4-202ENST00000399804 CD164Q04900 197 aa8.44□□□□□ -1.06
SCAF4-202ENST00000399804 SPINK1P00995 79 aa8.43□□□□□ -1.06
SCAF4-202ENST00000399804 LOC101927531A0A1B0GV80 90 aa8.42□□□□□ -1.06
SCAF4-202ENST00000399804 PRR15LQ9BU68 103 aa8.4□□□□□ -1.06
SCAF4-202ENST00000399804 A6NED7 52 aa8.39□□□□□ -1.07
SCAF4-202ENST00000399804 C9orf92A6NGG3 77 aa8.39□□□□□ -1.07
SCAF4-202ENST00000399804 LINC00483Q53H64 154 aa8.39□□□□□ -1.07
SCAF4-202ENST00000399804 SPTSSBQ8NFR3 76 aa8.39□□□□□ -1.07
SCAF4-202ENST00000399804 MMP24-AS1A0A0U1RRL7 71 aa8.38□□□□□ -1.07
SCAF4-202ENST00000399804 C7orf65Q6ZTY9 151 aa8.35□□□□□ -1.07
SCAF4-202ENST00000399804 ACYP2P14621 99 aa8.35□□□□□ -1.07
SCAF4-202ENST00000399804 KRTAP13-1Q8IUC0 172 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms