RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 BAHCC1Q9P281 2608 aa3.58□□□□□ -1.84
PTPRD-205ENST00000397611 TNP2Q05952 138 aa3.57□□□□□ -1.84
PTPRD-205ENST00000397611 IGLV8-61A0A075B6I0 122 aa3.57□□□□□ -1.84
PTPRD-205ENST00000397611 DNAH10OSP0CZ25 163 aa3.57□□□□□ -1.84
PTPRD-205ENST00000397611 CIRBP-AS1Q8TBR5 109 aa3.57□□□□□ -1.84
PTPRD-205ENST00000397611 LCE6AA0A183 80 aa3.57□□□□□ -1.84
PTPRD-205ENST00000397611 Q1T7F1 81 aa3.57□□□□□ -1.84
PTPRD-205ENST00000397611 TP53AIP1Q9HCN2 124 aa3.57□□□□□ -1.84
PTPRD-205ENST00000397611 ACYP2P14621 99 aa3.57□□□□□ -1.84
PTPRD-205ENST00000397611 Q8NDZ9 215 aa3.57□□□□□ -1.84
PTPRD-205ENST00000397611 SPRR4Q96PI1 79 aa3.56□□□□□ -1.84
PTPRD-205ENST00000397611 PDZD2O15018 2839 aa3.56□□□□□ -1.84
PTPRD-205ENST00000397611 Q6ZRP5 223 aa3.56□□□□□ -1.84
PTPRD-205ENST00000397611 FAM168BA1KXE4 195 aa3.55□□□□□ -1.84
PTPRD-205ENST00000397611 CDC42SE1Q9NRR8 79 aa3.55□□□□□ -1.84
PTPRD-205ENST00000397611 OCR1Q9BZK8 76 aa3.55□□□□□ -1.84
PTPRD-205ENST00000397611 KRTAP4-16G5E9R7 235 aaPredicted RBP3.55□□□□□ -1.84
PTPRD-205ENST00000397611 IGKV2D-30A0A075B6S6 120 aa3.55□□□□□ -1.84
PTPRD-205ENST00000397611 IGKV2-30P06310 120 aa3.55□□□□□ -1.84
PTPRD-205ENST00000397611 A8MWP4 228 aa3.54□□□□□ -1.84
PTPRD-205ENST00000397611 C15orf56Q8N910 161 aa3.54□□□□□ -1.84
PTPRD-205ENST00000397611 OXLD1Q5BKU9 147 aa3.54□□□□□ -1.84
PTPRD-205ENST00000397611 SPRR1BP22528 89 aa3.54□□□□□ -1.84
PTPRD-205ENST00000397611 IGFL1Q6UW32 110 aa3.54□□□□□ -1.84
PTPRD-205ENST00000397611 TENM4Q6N022 2769 aa3.53□□□□□ -1.84
PTPRD-205ENST00000397611 Q8N377 158 aa3.53□□□□□ -1.84
PTPRD-205ENST00000397611 H3BS24 57 aa3.53□□□□□ -1.84
PTPRD-205ENST00000397611 A0A1W2PNM2 257 aa3.53□□□□□ -1.84
PTPRD-205ENST00000397611 WWC2-AS2Q96NR7 200 aa3.53□□□□□ -1.84
PTPRD-205ENST00000397611 CRYBG3Q68DQ2 2970 aa3.53□□□□□ -1.84
PTPRD-205ENST00000397611 KRTAP10-3P60369 221 aa3.52□□□□□ -1.85
PTPRD-205ENST00000397611 C1orf134Q5TEV5 83 aa3.52□□□□□ -1.85
PTPRD-205ENST00000397611 IGLV1-50A0A075B6I6 118 aa3.52□□□□□ -1.85
PTPRD-205ENST00000397611 SMR3AQ99954 134 aa3.52□□□□□ -1.85
PTPRD-205ENST00000397611 PRAC1Q96KF2 57 aa3.52□□□□□ -1.85
PTPRD-205ENST00000397611 OTOGQ6ZRI0 2925 aa3.52□□□□□ -1.85
PTPRD-205ENST00000397611 SPINT4Q6UDR6 99 aa3.52□□□□□ -1.85
PTPRD-205ENST00000397611 PHF5AQ7RTV0 110 aaKnown RBP3.51□□□□□ -1.85
PTPRD-205ENST00000397611 LINC00588Q9Y4M8 146 aa3.51□□□□□ -1.85
PTPRD-205ENST00000397611 MIR22HGQ0VDD5 57 aa3.51□□□□□ -1.85
PTPRD-205ENST00000397611 MOBPQ13875 183 aa3.51□□□□□ -1.85
PTPRD-205ENST00000397611 ZCCHC13Q8WW36 166 aaKnown RBP3.51□□□□□ -1.85
PTPRD-205ENST00000397611 CNBPP62633 177 aaKnown RBP3.5□□□□□ -1.85
PTPRD-205ENST00000397611 UQCR11O14957 56 aa3.5□□□□□ -1.85
PTPRD-205ENST00000397611 SSBP3-AS1Q7Z2R9 100 aa3.49□□□□□ -1.85
PTPRD-205ENST00000397611 Q5VV11 94 aa3.49□□□□□ -1.85
PTPRD-205ENST00000397611 SPANXA2-OT1Q8N9U9 137 aa3.49□□□□□ -1.85
PTPRD-205ENST00000397611 CELSR1Q9NYQ6 3014 aa3.49□□□□□ -1.85
PTPRD-205ENST00000397611 C16orf90A8MZG2 172 aa3.49□□□□□ -1.85
PTPRD-205ENST00000397611 MRPL34Q9BQ48 92 aaKnown RBP3.49□□□□□ -1.85
PTPRD-205ENST00000397611 Q75L30 129 aa3.49□□□□□ -1.85
PTPRD-205ENST00000397611 C8orf17Q9NRJ1 99 aa3.48□□□□□ -1.85
PTPRD-205ENST00000397611 MYO15AQ9UKN7 3530 aa3.48□□□□□ -1.85
PTPRD-205ENST00000397611 DCHS1Q96JQ0 3298 aa3.48□□□□□ -1.85
PTPRD-205ENST00000397611 DSCR10P59022 87 aa3.48□□□□□ -1.85
PTPRD-205ENST00000397611 Q8N9P0 234 aaPredicted RBP3.47□□□□□ -1.85
PTPRD-205ENST00000397611 IGLV5-52A0A0A0MRZ9 124 aa3.47□□□□□ -1.85
PTPRD-205ENST00000397611 KRTAP24-1Q3LI83 254 aa3.47□□□□□ -1.85
PTPRD-205ENST00000397611 LINC01554Q52M75 96 aa3.47□□□□□ -1.85
PTPRD-205ENST00000397611 CHTF8P0CG12 524 aa3.47□□□□□ -1.85
PTPRD-205ENST00000397611 FAM229AH3BQW9 127 aa3.46□□□□□ -1.86
PTPRD-205ENST00000397611 LINC00313P59037 77 aa3.45□□□□□ -1.86
PTPRD-205ENST00000397611 PRR26Q8N8Z3 221 aa3.45□□□□□ -1.86
PTPRD-205ENST00000397611 A0A1B0GVX0 72 aa3.44□□□□□ -1.86
PTPRD-205ENST00000397611 SPACA4Q8TDM5 124 aa3.44□□□□□ -1.86
PTPRD-205ENST00000397611 SPINK7P58062 85 aa3.44□□□□□ -1.86
PTPRD-205ENST00000397611 KRTAP29-1A8MX34 341 aaPredicted RBP3.43□□□□□ -1.86
PTPRD-205ENST00000397611 LINC01558Q9Y6Z2 57 aa3.43□□□□□ -1.86
PTPRD-205ENST00000397611 ZFHX4Q86UP3 3567 aa3.43□□□□□ -1.86
PTPRD-205ENST00000397611 C9orf163Q8N9P6 203 aa3.43□□□□□ -1.86
PTPRD-205ENST00000397611 PLA2G1BP04054 148 aaKnown RBP3.43□□□□□ -1.86
PTPRD-205ENST00000397611 IGLV7-46A0A075B6I9 117 aa3.42□□□□□ -1.86
PTPRD-205ENST00000397611 PKD1L1Q8TDX9 2849 aa3.42□□□□□ -1.86
PTPRD-205ENST00000397611 WDFY3Q8IZQ1 3526 aa3.42□□□□□ -1.86
PTPRD-205ENST00000397611 DMDP11532 3685 aa3.42□□□□□ -1.86
PTPRD-205ENST00000397611 CASC10Q5T4H9 136 aa3.41□□□□□ -1.86
PTPRD-205ENST00000397611 LINC00472Q9H8W2 130 aa3.4□□□□□ -1.86
PTPRD-205ENST00000397611 J3QL48 77 aa3.4□□□□□ -1.86
PTPRD-205ENST00000397611 RELNP78509 3460 aa3.4□□□□□ -1.87
PTPRD-205ENST00000397611 HRES1P13985 223 aa3.4□□□□□ -1.87
PTPRD-205ENST00000397611 Q96NJ1 140 aa3.4□□□□□ -1.87
PTPRD-205ENST00000397611 ASB16-AS1Q495Z4 193 aa3.39□□□□□ -1.87
PTPRD-205ENST00000397611 KRTAP7-1Q8IUC3 87 aa3.39□□□□□ -1.87
PTPRD-205ENST00000397611 CSAG1Q6PB30 78 aa3.39□□□□□ -1.87
PTPRD-205ENST00000397611 ANAPC11Q9NYG5 84 aa3.39□□□□□ -1.87
PTPRD-205ENST00000397611 KRTAP10-11P60412 298 aa3.39□□□□□ -1.87
PTPRD-205ENST00000397611 LAMA5O15230 3695 aa3.38□□□□□ -1.87
PTPRD-205ENST00000397611 MMP24-AS1A0A0U1RRL7 71 aa3.37□□□□□ -1.87
PTPRD-205ENST00000397611 A8MU10 97 aa3.37□□□□□ -1.87
PTPRD-205ENST00000397611 APLNQ9ULZ1 77 aa3.37□□□□□ -1.87
PTPRD-205ENST00000397611 KRTAP13-1Q8IUC0 172 aa3.37□□□□□ -1.87
PTPRD-205ENST00000397611 NBDYA0A0U1RRE5 68 aa3.36□□□□□ -1.87
PTPRD-205ENST00000397611 RTL8CO15255 209 aa3.36□□□□□ -1.87
PTPRD-205ENST00000397611 Q8N1X5 172 aa3.36□□□□□ -1.87
PTPRD-205ENST00000397611 TENM2Q9NT68 2774 aa3.36□□□□□ -1.87
PTPRD-205ENST00000397611 A6NN06 94 aa3.35□□□□□ -1.87
PTPRD-205ENST00000397611 CRIPTQ9P021 101 aa3.35□□□□□ -1.87
PTPRD-205ENST00000397611 FBN1P35555 2871 aaKnown RBP3.34□□□□□ -1.87
PTPRD-205ENST00000397611 LINC00483Q53H64 154 aa3.34□□□□□ -1.88
PTPRD-205ENST00000397611 K7EIL1 84 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms