RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 K7EQZ3 153 aa6.61□□□□□ -1.35
CPSF1P1-201ENST00000397477 LY6G6CO95867 125 aa6.6□□□□□ -1.35
CPSF1P1-201ENST00000397477 LRCOL1A6NCL2 159 aa6.6□□□□□ -1.35
CPSF1P1-201ENST00000397477 TGP01266 2768 aa6.59□□□□□ -1.35
CPSF1P1-201ENST00000397477 IGFL1Q6UW32 110 aa6.59□□□□□ -1.35
CPSF1P1-201ENST00000397477 NUPR2A6NF83 97 aa6.59□□□□□ -1.35
CPSF1P1-201ENST00000397477 PLA2G2DQ9UNK4 145 aa6.59□□□□□ -1.35
CPSF1P1-201ENST00000397477 IGLV5-48A0A075B6I7 105 aa6.58□□□□□ -1.36
CPSF1P1-201ENST00000397477 KRTAP11-1Q8IUC1 163 aa6.57□□□□□ -1.36
CPSF1P1-201ENST00000397477 ANAPC11Q9NYG5 84 aa6.57□□□□□ -1.36
CPSF1P1-201ENST00000397477 KRTAP4-16G5E9R7 235 aaPredicted RBP6.57□□□□□ -1.36
CPSF1P1-201ENST00000397477 PANO1I0J062 215 aa6.57□□□□□ -1.36
CPSF1P1-201ENST00000397477 H7BZZ5 65 aa6.56□□□□□ -1.36
CPSF1P1-201ENST00000397477 SPRR1AP35321 89 aa6.56□□□□□ -1.36
CPSF1P1-201ENST00000397477 IGLV5-37A0A075B6J1 123 aa6.56□□□□□ -1.36
CPSF1P1-201ENST00000397477 COL7A1Q02388 2944 aa6.56□□□□□ -1.36
CPSF1P1-201ENST00000397477 NDUFS5O43920 106 aa6.54□□□□□ -1.36
CPSF1P1-201ENST00000397477 C9orf163Q8N9P6 203 aa6.54□□□□□ -1.36
CPSF1P1-201ENST00000397477 CNBPP62633 177 aaKnown RBP6.54□□□□□ -1.36
CPSF1P1-201ENST00000397477 SPINK6Q6UWN8 80 aa6.53□□□□□ -1.36
CPSF1P1-201ENST00000397477 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.53□□□□□ -1.36
CPSF1P1-201ENST00000397477 FP248Q71RG6 208 aaPredicted RBP6.53□□□□□ -1.36
CPSF1P1-201ENST00000397477 HCG22E2RYF7 251 aa6.52□□□□□ -1.37
CPSF1P1-201ENST00000397477 DSCR10P59022 87 aa6.52□□□□□ -1.37
CPSF1P1-201ENST00000397477 CDK2AP2O75956 126 aa6.51□□□□□ -1.37
CPSF1P1-201ENST00000397477 IGLV5-52A0A0A0MRZ9 124 aa6.51□□□□□ -1.37
CPSF1P1-201ENST00000397477 LINC00208Q96KT6 92 aa6.5□□□□□ -1.37
CPSF1P1-201ENST00000397477 RTL8CO15255 209 aa6.5□□□□□ -1.37
CPSF1P1-201ENST00000397477 KLKP1Q107X0 134 aa6.5□□□□□ -1.37
CPSF1P1-201ENST00000397477 MP68P56378 58 aa6.49□□□□□ -1.37
CPSF1P1-201ENST00000397477 HUWE1Q7Z6Z7 4374 aaKnown RBP6.49□□□□□ -1.37
CPSF1P1-201ENST00000397477 TNP2Q05952 138 aa6.49□□□□□ -1.37
CPSF1P1-201ENST00000397477 A0A087WTM6 91 aa6.49□□□□□ -1.37
CPSF1P1-201ENST00000397477 NDUFB1O75438 58 aa6.49□□□□□ -1.37
CPSF1P1-201ENST00000397477 PSPHP1O15172 72 aa6.48□□□□□ -1.37
CPSF1P1-201ENST00000397477 MOBPQ13875 183 aa6.48□□□□□ -1.37
CPSF1P1-201ENST00000397477 BCE1O60756 84 aa6.48□□□□□ -1.37
CPSF1P1-201ENST00000397477 CASC2Q6XLA1 102 aa6.48□□□□□ -1.37
CPSF1P1-201ENST00000397477 OCR1Q9BZK8 76 aa6.48□□□□□ -1.37
CPSF1P1-201ENST00000397477 NDUFC1O43677 76 aa6.47□□□□□ -1.37
CPSF1P1-201ENST00000397477 PMAIP1Q13794 54 aa6.47□□□□□ -1.37
CPSF1P1-201ENST00000397477 C1orf134Q5TEV5 83 aa6.47□□□□□ -1.37
CPSF1P1-201ENST00000397477 SPRR4Q96PI1 79 aa6.47□□□□□ -1.37
CPSF1P1-201ENST00000397477 IGHV6-1A0A0B4J1U7 121 aa6.46□□□□□ -1.38
CPSF1P1-201ENST00000397477 DNAH10Q8IVF4 4471 aa6.46□□□□□ -1.38
CPSF1P1-201ENST00000397477 LYSTQ99698 3801 aa6.46□□□□□ -1.38
CPSF1P1-201ENST00000397477 CIRBP-AS1Q8TBR5 109 aa6.46□□□□□ -1.38
CPSF1P1-201ENST00000397477 FAM229BQ4G0N7 80 aa6.45□□□□□ -1.38
CPSF1P1-201ENST00000397477 PSORS1C2Q9UIG4 136 aa6.44□□□□□ -1.38
CPSF1P1-201ENST00000397477 SPTSSBQ8NFR3 76 aa6.43□□□□□ -1.38
CPSF1P1-201ENST00000397477 ATP5EP56381 51 aaPredicted RBP6.42□□□□□ -1.38
CPSF1P1-201ENST00000397477 PCOTHQ58A44 107 aa6.42□□□□□ -1.38
CPSF1P1-201ENST00000397477 CMYA5Q8N3K9 4069 aa6.42□□□□□ -1.38
CPSF1P1-201ENST00000397477 A0A1B0GW54 56 aa6.41□□□□□ -1.38
CPSF1P1-201ENST00000397477 H0Y9P7 68 aa6.41□□□□□ -1.38
CPSF1P1-201ENST00000397477 SPACA4Q8TDM5 124 aa6.39□□□□□ -1.39
CPSF1P1-201ENST00000397477 Q6ZRN7 208 aaPredicted RBP6.39□□□□□ -1.39
CPSF1P1-201ENST00000397477 PRR15Q8IV56 129 aa6.38□□□□□ -1.39
CPSF1P1-201ENST00000397477 RETNLBQ9BQ08 111 aa6.38□□□□□ -1.39
CPSF1P1-201ENST00000397477 A8MWP4 228 aa6.37□□□□□ -1.39
CPSF1P1-201ENST00000397477 ZNF706Q9Y5V0 76 aaPredicted RBP6.37□□□□□ -1.39
CPSF1P1-201ENST00000397477 hDV103S1A0JD37 113 aa6.37□□□□□ -1.39
CPSF1P1-201ENST00000397477 C1orf64Q8NEQ6 169 aa6.36□□□□□ -1.39
CPSF1P1-201ENST00000397477 FBN3Q75N90 2809 aa6.36□□□□□ -1.39
CPSF1P1-201ENST00000397477 MEGF8Q7Z7M0 2845 aa6.35□□□□□ -1.39
CPSF1P1-201ENST00000397477 ZNF861PO60384 105 aa6.34□□□□□ -1.39
CPSF1P1-201ENST00000397477 IGLV8-61A0A075B6I0 122 aa6.32□□□□□ -1.4
CPSF1P1-201ENST00000397477 LINC00472Q9H8W2 130 aa6.32□□□□□ -1.4
CPSF1P1-201ENST00000397477 CHKB-CPT1BH3BT56 60 aa6.32□□□□□ -1.4
CPSF1P1-201ENST00000397477 DNAH9Q9NYC9 4486 aa6.31□□□□□ -1.4
CPSF1P1-201ENST00000397477 PLECQ15149 4684 aaKnown RBP6.31□□□□□ -1.4
CPSF1P1-201ENST00000397477 SPRR1BP22528 89 aa6.3□□□□□ -1.4
CPSF1P1-201ENST00000397477 KRTAP10-2P60368 255 aa6.3□□□□□ -1.4
CPSF1P1-201ENST00000397477 A8MUN3 132 aa6.3□□□□□ -1.4
CPSF1P1-201ENST00000397477 TRAV22A0A0B4J277 110 aa6.29□□□□□ -1.4
CPSF1P1-201ENST00000397477 IGLV7-43P04211 117 aa6.28□□□□□ -1.4
CPSF1P1-201ENST00000397477 C8orf17Q9NRJ1 99 aa6.28□□□□□ -1.4
CPSF1P1-201ENST00000397477 DNAH3Q8TD57 4116 aa6.27□□□□□ -1.41
CPSF1P1-201ENST00000397477 Q6ZR54 194 aa6.27□□□□□ -1.41
CPSF1P1-201ENST00000397477 WWC2-AS2Q96NR7 200 aa6.27□□□□□ -1.41
CPSF1P1-201ENST00000397477 MMP24-AS1A0A0U1RRL7 71 aa6.26□□□□□ -1.41
CPSF1P1-201ENST00000397477 DNAH7Q8WXX0 4024 aa6.26□□□□□ -1.41
CPSF1P1-201ENST00000397477 KRTAP13-1Q8IUC0 172 aa6.26□□□□□ -1.41
CPSF1P1-201ENST00000397477 PLAC8Q9NZF1 115 aa6.26□□□□□ -1.41
CPSF1P1-201ENST00000397477 A0A087X002 238 aa6.25□□□□□ -1.41
CPSF1P1-201ENST00000397477 CD164Q04900 197 aa6.25□□□□□ -1.41
CPSF1P1-201ENST00000397477 NOTCH2NLQ7Z3S9 236 aa6.25□□□□□ -1.41
CPSF1P1-201ENST00000397477 A6NED7 52 aa6.25□□□□□ -1.41
CPSF1P1-201ENST00000397477 C4orf48Q5BLP8 95 aa6.25□□□□□ -1.41
CPSF1P1-201ENST00000397477 A0A1B0GVX0 72 aa6.24□□□□□ -1.41
CPSF1P1-201ENST00000397477 PRR15LQ9BU68 103 aa6.24□□□□□ -1.41
CPSF1P1-201ENST00000397477 KRTAP29-1A8MX34 341 aaPredicted RBP6.24□□□□□ -1.41
CPSF1P1-201ENST00000397477 A8MU10 97 aa6.23□□□□□ -1.41
CPSF1P1-201ENST00000397477 SMR3BP02814 79 aaPredicted RBP6.23□□□□□ -1.41
CPSF1P1-201ENST00000397477 PRKDCP78527 4128 aaKnown RBP6.22□□□□□ -1.41
CPSF1P1-201ENST00000397477 MRPL34Q9BQ48 92 aaKnown RBP6.22□□□□□ -1.41
CPSF1P1-201ENST00000397477 STARD9Q9P2P6 4700 aa6.21□□□□□ -1.42
CPSF1P1-201ENST00000397477 KRTAP10-1P60331 282 aa6.21□□□□□ -1.42
CPSF1P1-201ENST00000397477 ZCCHC13Q8WW36 166 aaKnown RBP6.2□□□□□ -1.42
CPSF1P1-201ENST00000397477 DNHD1Q96M86 4753 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms