RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 FAM19A5Q7Z5A7 132 aaPredicted RBP9.32□□□□□ -0.92
TM9SF1-202ENST00000396854 RPS28P62857 69 aaKnown RBP9.32□□□□□ -0.92
TM9SF1-202ENST00000396854 C7orf33Q8WU49 177 aa9.32□□□□□ -0.92
TM9SF1-202ENST00000396854 PLAC8Q9NZF1 115 aa9.32□□□□□ -0.92
TM9SF1-202ENST00000396854 LRP1BQ9NZR2 4599 aa9.31□□□□□ -0.92
TM9SF1-202ENST00000396854 DYNC1H1Q14204 4646 aaKnown RBP9.31□□□□□ -0.92
TM9SF1-202ENST00000396854 DPH3Q96FX2 82 aa9.3□□□□□ -0.92
TM9SF1-202ENST00000396854 TRAV7A0A075B6U4 112 aa9.29□□□□□ -0.92
TM9SF1-202ENST00000396854 MRPL55Q7Z7F7 128 aaKnown RBP9.28□□□□□ -0.92
TM9SF1-202ENST00000396854 SCXQ7RTU7 201 aa9.27□□□□□ -0.93
TM9SF1-202ENST00000396854 PRYO14603 147 aa9.27□□□□□ -0.93
TM9SF1-202ENST00000396854 CIRBP-AS1Q8TBR5 109 aa9.27□□□□□ -0.93
TM9SF1-202ENST00000396854 IGLV1-50A0A075B6I6 118 aa9.25□□□□□ -0.93
TM9SF1-202ENST00000396854 PHF5AQ7RTV0 110 aaKnown RBP9.25□□□□□ -0.93
TM9SF1-202ENST00000396854 C20orf197Q8N268 126 aa9.24□□□□□ -0.93
TM9SF1-202ENST00000396854 Q8N377 158 aa9.24□□□□□ -0.93
TM9SF1-202ENST00000396854 DHRS4-AS1Q9P1J3 65 aa9.24□□□□□ -0.93
TM9SF1-202ENST00000396854 KRTAP4-16G5E9R7 235 aaPredicted RBP9.23□□□□□ -0.93
TM9SF1-202ENST00000396854 IGLV5-48A0A075B6I7 105 aa9.22□□□□□ -0.93
TM9SF1-202ENST00000396854 SPRR1AP35321 89 aa9.22□□□□□ -0.93
TM9SF1-202ENST00000396854 Q6ZRX8 168 aa9.22□□□□□ -0.93
TM9SF1-202ENST00000396854 APOBP04114 4563 aaKnown RBP9.21□□□□□ -0.93
TM9SF1-202ENST00000396854 RPL37AP8A6NKH3 93 aa9.2□□□□□ -0.94
TM9SF1-202ENST00000396854 KLKP1Q107X0 134 aa9.2□□□□□ -0.94
TM9SF1-202ENST00000396854 UBE2BP63146 152 aa9.19□□□□□ -0.94
TM9SF1-202ENST00000396854 DEFB105AQ8NG35 78 aa9.19□□□□□ -0.94
TM9SF1-202ENST00000396854 Q9BRP9 147 aa9.19□□□□□ -0.94
TM9SF1-202ENST00000396854 A0A1B0GW54 56 aa9.18□□□□□ -0.94
TM9SF1-202ENST00000396854 NREPQ16612 68 aa9.18□□□□□ -0.94
TM9SF1-202ENST00000396854 KRTAP11-1Q8IUC1 163 aa9.18□□□□□ -0.94
TM9SF1-202ENST00000396854 EPPK1P58107 5090 aaKnown RBP9.18□□□□□ -0.94
TM9SF1-202ENST00000396854 ETDCA0A1B0GVM5 59 aa9.17□□□□□ -0.94
TM9SF1-202ENST00000396854 H7BZZ5 65 aa9.17□□□□□ -0.94
TM9SF1-202ENST00000396854 IGKV4-1P06312 121 aa9.17□□□□□ -0.94
TM9SF1-202ENST00000396854 CDK2AP2O75956 126 aa9.16□□□□□ -0.94
TM9SF1-202ENST00000396854 OXTP01178 125 aa9.16□□□□□ -0.94
TM9SF1-202ENST00000396854 REG3GQ6UW15 175 aa9.16□□□□□ -0.94
TM9SF1-202ENST00000396854 FAM236DA0A1B0GTK5 79 aa9.15□□□□□ -0.94
TM9SF1-202ENST00000396854 FAM236CP0DP71 79 aa9.15□□□□□ -0.94
TM9SF1-202ENST00000396854 BPY2O14599 106 aa9.14□□□□□ -0.95
TM9SF1-202ENST00000396854 Q8N9L7 120 aa9.12□□□□□ -0.95
TM9SF1-202ENST00000396854 PSORS1C2Q9UIG4 136 aa9.12□□□□□ -0.95
TM9SF1-202ENST00000396854 A0A1W2PNM2 257 aa9.12□□□□□ -0.95
TM9SF1-202ENST00000396854 ERC2-IT1O76042 136 aa9.12□□□□□ -0.95
TM9SF1-202ENST00000396854 ST20-AS1Q8NBB2 130 aa9.12□□□□□ -0.95
TM9SF1-202ENST00000396854 SNURFQ9Y675 71 aa9.11□□□□□ -0.95
TM9SF1-202ENST00000396854 C1orf137Q5JT78 98 aa9.11□□□□□ -0.95
TM9SF1-202ENST00000396854 NDUFC1O43677 76 aa9.1□□□□□ -0.95
TM9SF1-202ENST00000396854 Q8NBF4 154 aa9.1□□□□□ -0.95
TM9SF1-202ENST00000396854 SPRR4Q96PI1 79 aa9.09□□□□□ -0.95
TM9SF1-202ENST00000396854 OCR1Q9BZK8 76 aa9.08□□□□□ -0.96
TM9SF1-202ENST00000396854 SERP1Q9Y6X1 66 aa9.08□□□□□ -0.96
TM9SF1-202ENST00000396854 F8WEM9 126 aa9.07□□□□□ -0.96
TM9SF1-202ENST00000396854 SMR3BP02814 79 aaPredicted RBP9.07□□□□□ -0.96
TM9SF1-202ENST00000396854 HSPG2P98160 4391 aa9.07□□□□□ -0.96
TM9SF1-202ENST00000396854 H0Y9J4 135 aa9.06□□□□□ -0.96
TM9SF1-202ENST00000396854 KRTAP13-1Q8IUC0 172 aa9.06□□□□□ -0.96
TM9SF1-202ENST00000396854 TMEM254Q8TBM7 123 aa9.06□□□□□ -0.96
TM9SF1-202ENST00000396854 VPS13BQ7Z7G8 4022 aa9.05□□□□□ -0.96
TM9SF1-202ENST00000396854 RYR1P21817 5038 aa9.04□□□□□ -0.96
TM9SF1-202ENST00000396854 RPL37AP61513 92 aaKnown RBP9.04□□□□□ -0.96
TM9SF1-202ENST00000396854 PRLHP81277 87 aa9.04□□□□□ -0.96
TM9SF1-202ENST00000396854 SMIM29Q86T20 159 aa9.04□□□□□ -0.96
TM9SF1-202ENST00000396854 IGLV7-43P04211 117 aa9.03□□□□□ -0.96
TM9SF1-202ENST00000396854 UBE2AP49459 152 aa9.03□□□□□ -0.96
TM9SF1-202ENST00000396854 ATP5EP56381 51 aaPredicted RBP9.03□□□□□ -0.96
TM9SF1-202ENST00000396854 Q5XG85 94 aa9.03□□□□□ -0.96
TM9SF1-202ENST00000396854 A0A0U1RQV1 116 aa9.01□□□□□ -0.97
TM9SF1-202ENST00000396854 ZNF861PO60384 105 aa9.01□□□□□ -0.97
TM9SF1-202ENST00000396854 FAT1Q14517 4588 aa9□□□□□ -0.97
TM9SF1-202ENST00000396854 KRTAP10-4P60372 401 aaPredicted RBP9□□□□□ -0.97
TM9SF1-202ENST00000396854 C5orf47Q569G3 176 aa9□□□□□ -0.97
TM9SF1-202ENST00000396854 KIAA1109Q2LD37 5005 aa8.99□□□□□ -0.97
TM9SF1-202ENST00000396854 DSCR10P59022 87 aa8.99□□□□□ -0.97
TM9SF1-202ENST00000396854 FAM229AH3BQW9 127 aa8.98□□□□□ -0.97
TM9SF1-202ENST00000396854 IGLV8-61A0A075B6I0 122 aa8.98□□□□□ -0.97
TM9SF1-202ENST00000396854 HIGD2AQ9BW72 106 aa8.98□□□□□ -0.97
TM9SF1-202ENST00000396854 BIRC6Q9NR09 4857 aa8.97□□□□□ -0.97
TM9SF1-202ENST00000396854 PLA2G1BP04054 148 aaKnown RBP8.97□□□□□ -0.97
TM9SF1-202ENST00000396854 Q5VSD8 79 aa8.96□□□□□ -0.97
TM9SF1-202ENST00000396854 IGFL1Q6UW32 110 aa8.96□□□□□ -0.97
TM9SF1-202ENST00000396854 C4orf26Q17RF5 130 aa8.96□□□□□ -0.98
TM9SF1-202ENST00000396854 Q8N1X5 172 aa8.96□□□□□ -0.98
TM9SF1-202ENST00000396854 KRTAP17-1Q9BYP8 105 aa8.95□□□□□ -0.98
TM9SF1-202ENST00000396854 K7EQZ3 153 aa8.94□□□□□ -0.98
TM9SF1-202ENST00000396854 SPRR1BP22528 89 aa8.92□□□□□ -0.98
TM9SF1-202ENST00000396854 SPINK6Q6UWN8 80 aa8.92□□□□□ -0.98
TM9SF1-202ENST00000396854 SMIM26A0A096LP01 95 aa8.91□□□□□ -0.98
TM9SF1-202ENST00000396854 SRRM2Q9UQ35 2752 aaKnown RBP8.91□□□□□ -0.98
TM9SF1-202ENST00000396854 PKHD1L1Q86WI1 4243 aa8.9□□□□□ -0.98
TM9SF1-202ENST00000396854 A0A0G2JQZ4 141 aa8.9□□□□□ -0.99
TM9SF1-202ENST00000396854 HRCT1Q6UXD1 115 aa8.9□□□□□ -0.99
TM9SF1-202ENST00000396854 HCG22E2RYF7 251 aa8.89□□□□□ -0.99
TM9SF1-202ENST00000396854 ZNF706Q9Y5V0 76 aaPredicted RBP8.89□□□□□ -0.99
TM9SF1-202ENST00000396854 A0A087WSZ3 146 aa8.87□□□□□ -0.99
TM9SF1-202ENST00000396854 FP248Q71RG6 208 aaPredicted RBP8.87□□□□□ -0.99
TM9SF1-202ENST00000396854 ZCCHC13Q8WW36 166 aaKnown RBP8.86□□□□□ -0.99
TM9SF1-202ENST00000396854 LINC00483Q53H64 154 aa8.85□□□□□ -0.99
TM9SF1-202ENST00000396854 KRTAP1-4P0C5Y4 121 aa8.82□□□□□ -1
TM9SF1-202ENST00000396854 DEFB116Q30KQ4 102 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms