RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 IGLV5-52A0A0A0MRZ9 124 aa9.27□□□□□ -0.93
CBX3-202ENST00000396386 COX7CP15954 63 aa9.26□□□□□ -0.93
CBX3-202ENST00000396386 SPRR1BP22528 89 aa9.26□□□□□ -0.93
CBX3-202ENST00000396386 SPRR4Q96PI1 79 aa9.26□□□□□ -0.93
CBX3-202ENST00000396386 IGLV8-61A0A075B6I0 122 aa9.25□□□□□ -0.93
CBX3-202ENST00000396386 KRTAP13-1Q8IUC0 172 aa9.25□□□□□ -0.93
CBX3-202ENST00000396386 SERP2Q8N6R1 65 aa9.24□□□□□ -0.93
CBX3-202ENST00000396386 RYR2Q92736 4967 aa9.24□□□□□ -0.93
CBX3-202ENST00000396386 IGFL1Q6UW32 110 aa9.23□□□□□ -0.93
CBX3-202ENST00000396386 BPY2O14599 106 aa9.23□□□□□ -0.93
CBX3-202ENST00000396386 C9orf153Q5TBE3 101 aa9.23□□□□□ -0.93
CBX3-202ENST00000396386 PLAC8Q9NZF1 115 aa9.23□□□□□ -0.93
CBX3-202ENST00000396386 SACSQ9NZJ4 4579 aa9.22□□□□□ -0.93
CBX3-202ENST00000396386 CRYGAP11844 174 aa9.21□□□□□ -0.93
CBX3-202ENST00000396386 IGKV4-1P06312 121 aa9.19□□□□□ -0.94
CBX3-202ENST00000396386 A0A0G2JQZ4 141 aa9.17□□□□□ -0.94
CBX3-202ENST00000396386 Q8N9L7 120 aa9.17□□□□□ -0.94
CBX3-202ENST00000396386 DNAH6Q9C0G6 4158 aa9.17□□□□□ -0.94
CBX3-202ENST00000396386 SMIM20Q8N5G0 67 aa9.16□□□□□ -0.94
CBX3-202ENST00000396386 PSORS1C2Q9UIG4 136 aa9.16□□□□□ -0.94
CBX3-202ENST00000396386 DNAH17Q9UFH2 4485 aa9.16□□□□□ -0.94
CBX3-202ENST00000396386 ALMS1Q8TCU4 4167 aa9.15□□□□□ -0.95
CBX3-202ENST00000396386 EPPK1P58107 5090 aaKnown RBP9.15□□□□□ -0.95
CBX3-202ENST00000396386 ZNF706Q9Y5V0 76 aaPredicted RBP9.14□□□□□ -0.95
CBX3-202ENST00000396386 KMT2AQ03164 3969 aa9.14□□□□□ -0.95
CBX3-202ENST00000396386 DNAH2Q9P225 4427 aa9.13□□□□□ -0.95
CBX3-202ENST00000396386 TRAV7A0A075B6U4 112 aa9.13□□□□□ -0.95
CBX3-202ENST00000396386 SS18L2Q9UHA2 77 aa9.13□□□□□ -0.95
CBX3-202ENST00000396386 A0A087WSZ3 146 aa9.12□□□□□ -0.95
CBX3-202ENST00000396386 LINC00483Q53H64 154 aa9.11□□□□□ -0.95
CBX3-202ENST00000396386 HECTD4Q9Y4D8 3996 aa9.11□□□□□ -0.95
CBX3-202ENST00000396386 KRTAP10-2P60368 255 aa9.1□□□□□ -0.95
CBX3-202ENST00000396386 ZNF861PO60384 105 aa9.09□□□□□ -0.95
CBX3-202ENST00000396386 DSCR10P59022 87 aa9.08□□□□□ -0.96
CBX3-202ENST00000396386 BIRC6Q9NR09 4857 aa9.08□□□□□ -0.96
CBX3-202ENST00000396386 IGLV9-49A0A0B4J1Y8 123 aa9.06□□□□□ -0.96
CBX3-202ENST00000396386 K7EQZ3 153 aa9.06□□□□□ -0.96
CBX3-202ENST00000396386 HYDINQ4G0P3 5121 aa9.06□□□□□ -0.96
CBX3-202ENST00000396386 RPL37AP61513 92 aaKnown RBP9.04□□□□□ -0.96
CBX3-202ENST00000396386 CYSTM1Q9H1C7 97 aa9.04□□□□□ -0.96
CBX3-202ENST00000396386 IGLV7-43P04211 117 aa9.04□□□□□ -0.96
CBX3-202ENST00000396386 C20orf197Q8N268 126 aa9.04□□□□□ -0.96
CBX3-202ENST00000396386 FAM30AQ9NZY2 134 aa9.04□□□□□ -0.96
CBX3-202ENST00000396386 CIRBP-AS1Q8TBR5 109 aa9.03□□□□□ -0.96
CBX3-202ENST00000396386 DEFB116Q30KQ4 102 aa9.01□□□□□ -0.97
CBX3-202ENST00000396386 Q6ZSA8 131 aa9.01□□□□□ -0.97
CBX3-202ENST00000396386 KRTAP10-1P60331 282 aa9□□□□□ -0.97
CBX3-202ENST00000396386 MOBPQ13875 183 aa9□□□□□ -0.97
CBX3-202ENST00000396386 OCR1Q9BZK8 76 aa9□□□□□ -0.97
CBX3-202ENST00000396386 SRRM2Q9UQ35 2752 aaKnown RBP8.99□□□□□ -0.97
CBX3-202ENST00000396386 FRAS1Q86XX4 4008 aa8.99□□□□□ -0.97
CBX3-202ENST00000396386 TMEM258P61165 79 aa8.99□□□□□ -0.97
CBX3-202ENST00000396386 HCG22E2RYF7 251 aa8.98□□□□□ -0.97
CBX3-202ENST00000396386 LINC00472Q9H8W2 130 aa8.98□□□□□ -0.97
CBX3-202ENST00000396386 KLKP1Q107X0 134 aa8.97□□□□□ -0.97
CBX3-202ENST00000396386 DNAH8Q96JB1 4490 aa8.97□□□□□ -0.97
CBX3-202ENST00000396386 ANAPC11Q9NYG5 84 aa8.96□□□□□ -0.97
CBX3-202ENST00000396386 LCE6AA0A183 80 aa8.95□□□□□ -0.98
CBX3-202ENST00000396386 A8MWP4 228 aa8.94□□□□□ -0.98
CBX3-202ENST00000396386 J3KT08 172 aa8.94□□□□□ -0.98
CBX3-202ENST00000396386 SNURFQ9Y675 71 aa8.94□□□□□ -0.98
CBX3-202ENST00000396386 HRCT1Q6UXD1 115 aa8.93□□□□□ -0.98
CBX3-202ENST00000396386 DNAH11Q96DT5 4516 aa8.92□□□□□ -0.98
CBX3-202ENST00000396386 PRR15Q8IV56 129 aa8.92□□□□□ -0.98
CBX3-202ENST00000396386 TMEM254Q8TBM7 123 aa8.92□□□□□ -0.98
CBX3-202ENST00000396386 DNAH5Q8TE73 4624 aa8.92□□□□□ -0.98
CBX3-202ENST00000396386 WFDC13Q8IUB5 93 aa8.9□□□□□ -0.98
CBX3-202ENST00000396386 H7BZZ5 65 aa8.89□□□□□ -0.99
CBX3-202ENST00000396386 Q96NJ1 140 aa8.89□□□□□ -0.99
CBX3-202ENST00000396386 NDUFC1O43677 76 aa8.88□□□□□ -0.99
CBX3-202ENST00000396386 PKD1P98161 4303 aa8.88□□□□□ -0.99
CBX3-202ENST00000396386 A0A0U1RQV1 116 aa8.87□□□□□ -0.99
CBX3-202ENST00000396386 KRTAP29-1A8MX34 341 aaPredicted RBP8.87□□□□□ -0.99
CBX3-202ENST00000396386 NDUFB1O75438 58 aa8.87□□□□□ -0.99
CBX3-202ENST00000396386 CASC2Q6XLA1 102 aa8.87□□□□□ -0.99
CBX3-202ENST00000396386 FAT2Q9NYQ8 4349 aa8.86□□□□□ -0.99
CBX3-202ENST00000396386 FAM236DA0A1B0GTK5 79 aa8.85□□□□□ -0.99
CBX3-202ENST00000396386 FAM236CP0DP71 79 aa8.85□□□□□ -0.99
CBX3-202ENST00000396386 LINC00336Q6ZUF6 198 aa8.85□□□□□ -0.99
CBX3-202ENST00000396386 SSBP3-AS1Q7Z2R9 100 aa8.84□□□□□ -0.99
CBX3-202ENST00000396386 CD164Q04900 197 aa8.83□□□□□ -1
CBX3-202ENST00000396386 MMP24-AS1A0A0U1RRL7 71 aa8.83□□□□□ -1
CBX3-202ENST00000396386 FAM229BQ4G0N7 80 aa8.81□□□□□ -1
CBX3-202ENST00000396386 C5orf47Q569G3 176 aa8.81□□□□□ -1
CBX3-202ENST00000396386 CDK2AP2O75956 126 aa8.8□□□□□ -1
CBX3-202ENST00000396386 RPS28P62857 69 aaKnown RBP8.79□□□□□ -1
CBX3-202ENST00000396386 A0A1B0GVX0 72 aa8.79□□□□□ -1
CBX3-202ENST00000396386 A0A087X002 238 aa8.78□□□□□ -1
CBX3-202ENST00000396386 ATP5EP56381 51 aaPredicted RBP8.78□□□□□ -1
CBX3-202ENST00000396386 hDV103S1A0JD37 113 aa8.77□□□□□ -1.01
CBX3-202ENST00000396386 C8orf17Q9NRJ1 99 aa8.77□□□□□ -1.01
CBX3-202ENST00000396386 KRTAP13-2Q52LG2 175 aa8.77□□□□□ -1.01
CBX3-202ENST00000396386 ZCCHC13Q8WW36 166 aaKnown RBP8.75□□□□□ -1.01
CBX3-202ENST00000396386 IGHV6-1A0A0B4J1U7 121 aa8.74□□□□□ -1.01
CBX3-202ENST00000396386 MP68P56378 58 aa8.74□□□□□ -1.01
CBX3-202ENST00000396386 HERC2O95714 4834 aa8.74□□□□□ -1.01
CBX3-202ENST00000396386 A0A1B0GVY2 172 aa8.74□□□□□ -1.01
CBX3-202ENST00000396386 KRTAP1-4P0C5Y4 121 aa8.74□□□□□ -1.01
CBX3-202ENST00000396386 ASB16-AS1Q495Z4 193 aa8.74□□□□□ -1.01
CBX3-202ENST00000396386 SPINK6Q6UWN8 80 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms