RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 IGFL1Q6UW32 110 aa6.7□□□□□ -1.34
ACTN1-203ENST00000394419 IGLV9-49A0A0B4J1Y8 123 aa6.69□□□□□ -1.34
ACTN1-203ENST00000394419 PLA2G2DQ9UNK4 145 aa6.69□□□□□ -1.34
ACTN1-203ENST00000394419 C16orf90A8MZG2 172 aa6.69□□□□□ -1.34
ACTN1-203ENST00000394419 OCR1Q9BZK8 76 aa6.69□□□□□ -1.34
ACTN1-203ENST00000394419 COL7A1Q02388 2944 aa6.68□□□□□ -1.34
ACTN1-203ENST00000394419 EPM2AB3EWF7 344 aa6.68□□□□□ -1.34
ACTN1-203ENST00000394419 KRTAP4-16G5E9R7 235 aaPredicted RBP6.68□□□□□ -1.34
ACTN1-203ENST00000394419 HCG22E2RYF7 251 aa6.67□□□□□ -1.34
ACTN1-203ENST00000394419 SPRR1AP35321 89 aa6.67□□□□□ -1.34
ACTN1-203ENST00000394419 B9D2Q9BPU9 175 aa6.67□□□□□ -1.34
ACTN1-203ENST00000394419 MP68P56378 58 aa6.67□□□□□ -1.34
ACTN1-203ENST00000394419 DSCR10P59022 87 aa6.67□□□□□ -1.34
ACTN1-203ENST00000394419 C14orf177Q52M58 125 aa6.67□□□□□ -1.34
ACTN1-203ENST00000394419 FAM229BQ4G0N7 80 aa6.66□□□□□ -1.34
ACTN1-203ENST00000394419 LINC00208Q96KT6 92 aa6.66□□□□□ -1.34
ACTN1-203ENST00000394419 IGLV5-37A0A075B6J1 123 aa6.66□□□□□ -1.34
ACTN1-203ENST00000394419 PMAIP1Q13794 54 aa6.65□□□□□ -1.34
ACTN1-203ENST00000394419 NDUFS5O43920 106 aa6.64□□□□□ -1.35
ACTN1-203ENST00000394419 ATP5EP56381 51 aaPredicted RBP6.63□□□□□ -1.35
ACTN1-203ENST00000394419 MDFIQ99750 246 aa6.63□□□□□ -1.35
ACTN1-203ENST00000394419 TNP2Q05952 138 aa6.63□□□□□ -1.35
ACTN1-203ENST00000394419 SPRR4Q96PI1 79 aa6.62□□□□□ -1.35
ACTN1-203ENST00000394419 CASC2Q6XLA1 102 aa6.62□□□□□ -1.35
ACTN1-203ENST00000394419 A0A1B0GW54 56 aa6.6□□□□□ -1.35
ACTN1-203ENST00000394419 KRTAP11-1Q8IUC1 163 aa6.6□□□□□ -1.35
ACTN1-203ENST00000394419 TGP01266 2768 aa6.6□□□□□ -1.35
ACTN1-203ENST00000394419 NDUFB1O75438 58 aa6.6□□□□□ -1.35
ACTN1-203ENST00000394419 PSPHP1O15172 72 aa6.59□□□□□ -1.35
ACTN1-203ENST00000394419 CDK2AP2O75956 126 aa6.59□□□□□ -1.35
ACTN1-203ENST00000394419 NBDYA0A0U1RRE5 68 aa6.59□□□□□ -1.36
ACTN1-203ENST00000394419 APLNQ9ULZ1 77 aa6.59□□□□□ -1.36
ACTN1-203ENST00000394419 CNBPP62633 177 aaKnown RBP6.58□□□□□ -1.36
ACTN1-203ENST00000394419 SPINK6Q6UWN8 80 aa6.57□□□□□ -1.36
ACTN1-203ENST00000394419 ANAPC11Q9NYG5 84 aa6.57□□□□□ -1.36
ACTN1-203ENST00000394419 H0Y9P7 68 aa6.57□□□□□ -1.36
ACTN1-203ENST00000394419 C9orf163Q8N9P6 203 aa6.57□□□□□ -1.36
ACTN1-203ENST00000394419 PANO1I0J062 215 aa6.56□□□□□ -1.36
ACTN1-203ENST00000394419 C1orf64Q8NEQ6 169 aa6.55□□□□□ -1.36
ACTN1-203ENST00000394419 PCOTHQ58A44 107 aa6.55□□□□□ -1.36
ACTN1-203ENST00000394419 IGHV6-1A0A0B4J1U7 121 aa6.54□□□□□ -1.36
ACTN1-203ENST00000394419 DNAH10Q8IVF4 4471 aa6.54□□□□□ -1.36
ACTN1-203ENST00000394419 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.53□□□□□ -1.36
ACTN1-203ENST00000394419 NUPR2A6NF83 97 aa6.53□□□□□ -1.36
ACTN1-203ENST00000394419 MOBPQ13875 183 aa6.52□□□□□ -1.37
ACTN1-203ENST00000394419 PRR15Q8IV56 129 aa6.52□□□□□ -1.37
ACTN1-203ENST00000394419 LYSTQ99698 3801 aa6.52□□□□□ -1.37
ACTN1-203ENST00000394419 A8MWP4 228 aa6.51□□□□□ -1.37
ACTN1-203ENST00000394419 A8MU10 97 aa6.5□□□□□ -1.37
ACTN1-203ENST00000394419 SPTSSBQ8NFR3 76 aa6.5□□□□□ -1.37
ACTN1-203ENST00000394419 hDV103S1A0JD37 113 aa6.49□□□□□ -1.37
ACTN1-203ENST00000394419 LY6G6CO95867 125 aa6.49□□□□□ -1.37
ACTN1-203ENST00000394419 HUWE1Q7Z6Z7 4374 aaKnown RBP6.49□□□□□ -1.37
ACTN1-203ENST00000394419 CIRBP-AS1Q8TBR5 109 aa6.48□□□□□ -1.37
ACTN1-203ENST00000394419 RTL8CO15255 209 aa6.48□□□□□ -1.37
ACTN1-203ENST00000394419 IGLV5-52A0A0A0MRZ9 124 aa6.47□□□□□ -1.37
ACTN1-203ENST00000394419 TRAV22A0A0B4J277 110 aa6.46□□□□□ -1.38
ACTN1-203ENST00000394419 CD164Q04900 197 aa6.46□□□□□ -1.38
ACTN1-203ENST00000394419 A0A087WTM6 91 aa6.46□□□□□ -1.38
ACTN1-203ENST00000394419 PSORS1C2Q9UIG4 136 aa6.46□□□□□ -1.38
ACTN1-203ENST00000394419 IGLV8-61A0A075B6I0 122 aa6.45□□□□□ -1.38
ACTN1-203ENST00000394419 LINC00472Q9H8W2 130 aa6.44□□□□□ -1.38
ACTN1-203ENST00000394419 A8MUN3 132 aa6.43□□□□□ -1.38
ACTN1-203ENST00000394419 ZNF706Q9Y5V0 76 aaPredicted RBP6.43□□□□□ -1.38
ACTN1-203ENST00000394419 CMYA5Q8N3K9 4069 aa6.43□□□□□ -1.38
ACTN1-203ENST00000394419 RETNLBQ9BQ08 111 aa6.42□□□□□ -1.38
ACTN1-203ENST00000394419 ZCCHC13Q8WW36 166 aaKnown RBP6.42□□□□□ -1.38
ACTN1-203ENST00000394419 SPACA4Q8TDM5 124 aa6.41□□□□□ -1.38
ACTN1-203ENST00000394419 CHKB-CPT1BH3BT56 60 aa6.41□□□□□ -1.38
ACTN1-203ENST00000394419 RBM12B-AS1Q9P1G2 102 aa6.41□□□□□ -1.38
ACTN1-203ENST00000394419 SPRR1BP22528 89 aa6.41□□□□□ -1.38
ACTN1-203ENST00000394419 C1orf134Q5TEV5 83 aa6.41□□□□□ -1.38
ACTN1-203ENST00000394419 PRR15LQ9BU68 103 aa6.4□□□□□ -1.38
ACTN1-203ENST00000394419 KRTAP29-1A8MX34 341 aaPredicted RBP6.4□□□□□ -1.39
ACTN1-203ENST00000394419 MMP24-AS1A0A0U1RRL7 71 aa6.4□□□□□ -1.39
ACTN1-203ENST00000394419 C8orf17Q9NRJ1 99 aa6.39□□□□□ -1.39
ACTN1-203ENST00000394419 FBN3Q75N90 2809 aa6.39□□□□□ -1.39
ACTN1-203ENST00000394419 C4orf48Q5BLP8 95 aa6.39□□□□□ -1.39
ACTN1-203ENST00000394419 LCE6AA0A183 80 aa6.38□□□□□ -1.39
ACTN1-203ENST00000394419 Q6ZRN7 208 aaPredicted RBP6.38□□□□□ -1.39
ACTN1-203ENST00000394419 ZNF861PO60384 105 aa6.38□□□□□ -1.39
ACTN1-203ENST00000394419 MEGF8Q7Z7M0 2845 aa6.36□□□□□ -1.39
ACTN1-203ENST00000394419 DNAH9Q9NYC9 4486 aa6.36□□□□□ -1.39
ACTN1-203ENST00000394419 A0A1B0GVX0 72 aa6.35□□□□□ -1.39
ACTN1-203ENST00000394419 SPAG11AQ6PDA7 123 aa6.35□□□□□ -1.39
ACTN1-203ENST00000394419 H3BPC8 53 aa6.35□□□□□ -1.39
ACTN1-203ENST00000394419 CYP4F30PQ9H0H9 118 aa6.35□□□□□ -1.39
ACTN1-203ENST00000394419 A6NED7 52 aa6.34□□□□□ -1.39
ACTN1-203ENST00000394419 COA5Q86WW8 74 aa6.34□□□□□ -1.39
ACTN1-203ENST00000394419 PLECQ15149 4684 aaKnown RBP6.34□□□□□ -1.39
ACTN1-203ENST00000394419 A0A087X002 238 aa6.34□□□□□ -1.4
ACTN1-203ENST00000394419 NOTCH2NLQ7Z3S9 236 aa6.34□□□□□ -1.4
ACTN1-203ENST00000394419 MRPL34Q9BQ48 92 aaKnown RBP6.34□□□□□ -1.4
ACTN1-203ENST00000394419 WWC2-AS2Q96NR7 200 aa6.33□□□□□ -1.4
ACTN1-203ENST00000394419 TP53AIP1Q9HCN2 124 aa6.33□□□□□ -1.4
ACTN1-203ENST00000394419 KRTAP13-1Q8IUC0 172 aa6.33□□□□□ -1.4
ACTN1-203ENST00000394419 Q1T7F1 81 aa6.32□□□□□ -1.4
ACTN1-203ENST00000394419 DNAH7Q8WXX0 4024 aa6.31□□□□□ -1.4
ACTN1-203ENST00000394419 KTN1-AS1Q86SY8 53 aa6.31□□□□□ -1.4
ACTN1-203ENST00000394419 IGLV7-43P04211 117 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms