RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 NF1P21359 2839 aa8.44□□□□□ -1.06
TRAPPC9-201ENST00000389328 KRTAP10-11P60412 298 aa8.44□□□□□ -1.06
TRAPPC9-201ENST00000389328 TLX1NBP0CAT3 122 aa8.44□□□□□ -1.06
TRAPPC9-201ENST00000389328 SPINK1P00995 79 aa8.42□□□□□ -1.06
TRAPPC9-201ENST00000389328 PLA2G2DQ9UNK4 145 aa8.42□□□□□ -1.06
TRAPPC9-201ENST00000389328 DCHS2Q6V1P9 2916 aa8.42□□□□□ -1.06
TRAPPC9-201ENST00000389328 CELSR2Q9HCU4 2923 aa8.42□□□□□ -1.06
TRAPPC9-201ENST00000389328 LY6G6CO95867 125 aa8.41□□□□□ -1.06
TRAPPC9-201ENST00000389328 Q1T7F1 81 aa8.4□□□□□ -1.07
TRAPPC9-201ENST00000389328 CYP4F30PQ9H0H9 118 aa8.4□□□□□ -1.07
TRAPPC9-201ENST00000389328 SPRR4Q96PI1 79 aa8.39□□□□□ -1.07
TRAPPC9-201ENST00000389328 CRYBG3Q68DQ2 2970 aa8.39□□□□□ -1.07
TRAPPC9-201ENST00000389328 KRTAP24-1Q3LI83 254 aa8.39□□□□□ -1.07
TRAPPC9-201ENST00000389328 LOC101927531A0A1B0GV80 90 aa8.38□□□□□ -1.07
TRAPPC9-201ENST00000389328 A0A1B0GU69 56 aa8.37□□□□□ -1.07
TRAPPC9-201ENST00000389328 IGKV2D-30A0A075B6S6 120 aa8.37□□□□□ -1.07
TRAPPC9-201ENST00000389328 IGKV2-30P06310 120 aa8.37□□□□□ -1.07
TRAPPC9-201ENST00000389328 ACYP2P14621 99 aa8.37□□□□□ -1.07
TRAPPC9-201ENST00000389328 IGLV5-52A0A0A0MRZ9 124 aa8.36□□□□□ -1.07
TRAPPC9-201ENST00000389328 C8orf17Q9NRJ1 99 aa8.35□□□□□ -1.07
TRAPPC9-201ENST00000389328 MRPL34Q9BQ48 92 aaKnown RBP8.34□□□□□ -1.07
TRAPPC9-201ENST00000389328 SVEP1Q4LDE5 3571 aa8.34□□□□□ -1.07
TRAPPC9-201ENST00000389328 MDFIQ99750 246 aa8.34□□□□□ -1.07
TRAPPC9-201ENST00000389328 NUPR2A6NF83 97 aa8.33□□□□□ -1.08
TRAPPC9-201ENST00000389328 ATP11AUNQ6ZP68 121 aa8.33□□□□□ -1.08
TRAPPC9-201ENST00000389328 SPANXA2-OT1Q8N9U9 137 aa8.33□□□□□ -1.08
TRAPPC9-201ENST00000389328 IGLV5-37A0A075B6J1 123 aa8.32□□□□□ -1.08
TRAPPC9-201ENST00000389328 CD164Q04900 197 aa8.32□□□□□ -1.08
TRAPPC9-201ENST00000389328 ANAPC11Q9NYG5 84 aa8.31□□□□□ -1.08
TRAPPC9-201ENST00000389328 NSD1Q96L73 2696 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC9-201ENST00000389328 IGLV8-61A0A075B6I0 122 aa8.3□□□□□ -1.08
TRAPPC9-201ENST00000389328 HIVEP1P15822 2718 aa8.3□□□□□ -1.08
TRAPPC9-201ENST00000389328 KTN1-AS1Q86SY8 53 aa8.3□□□□□ -1.08
TRAPPC9-201ENST00000389328 APCP25054 2843 aa8.29□□□□□ -1.08
TRAPPC9-201ENST00000389328 MXRA5Q9NR99 2828 aa8.29□□□□□ -1.08
TRAPPC9-201ENST00000389328 NBDYA0A0U1RRE5 68 aa8.28□□□□□ -1.08
TRAPPC9-201ENST00000389328 CELSR1Q9NYQ6 3014 aa8.28□□□□□ -1.08
TRAPPC9-201ENST00000389328 KRTAP26-1Q6PEX3 210 aa8.28□□□□□ -1.08
TRAPPC9-201ENST00000389328 ITPR2Q14571 2701 aa8.28□□□□□ -1.08
TRAPPC9-201ENST00000389328 A0A1B0GVX0 72 aa8.28□□□□□ -1.08
TRAPPC9-201ENST00000389328 SPRR1AP35321 89 aa8.28□□□□□ -1.08
TRAPPC9-201ENST00000389328 K7ERS5 55 aa8.27□□□□□ -1.08
TRAPPC9-201ENST00000389328 CNBPP62633 177 aaKnown RBP8.26□□□□□ -1.09
TRAPPC9-201ENST00000389328 C7orf65Q6ZTY9 151 aa8.26□□□□□ -1.09
TRAPPC9-201ENST00000389328 Q8N9P0 234 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC9-201ENST00000389328 SPACA4Q8TDM5 124 aa8.25□□□□□ -1.09
TRAPPC9-201ENST00000389328 C9orf163Q8N9P6 203 aa8.24□□□□□ -1.09
TRAPPC9-201ENST00000389328 LINC00313P59037 77 aa8.24□□□□□ -1.09
TRAPPC9-201ENST00000389328 PRR26Q8N8Z3 221 aa8.24□□□□□ -1.09
TRAPPC9-201ENST00000389328 K7EIL1 84 aa8.23□□□□□ -1.09
TRAPPC9-201ENST00000389328 RTL8CO15255 209 aa8.23□□□□□ -1.09
TRAPPC9-201ENST00000389328 CUBNO60494 3623 aa8.23□□□□□ -1.09
TRAPPC9-201ENST00000389328 C1orf134Q5TEV5 83 aa8.22□□□□□ -1.09
TRAPPC9-201ENST00000389328 Q5VV11 94 aa8.22□□□□□ -1.09
TRAPPC9-201ENST00000389328 SPENQ96T58 3664 aaKnown RBP8.22□□□□□ -1.09
TRAPPC9-201ENST00000389328 CDC42SE1Q9NRR8 79 aa8.21□□□□□ -1.09
TRAPPC9-201ENST00000389328 TNP2Q05952 138 aa8.21□□□□□ -1.09
TRAPPC9-201ENST00000389328 C8orf87E5RJ46 101 aa8.2□□□□□ -1.1
TRAPPC9-201ENST00000389328 IGLV7-46A0A075B6I9 117 aa8.19□□□□□ -1.1
TRAPPC9-201ENST00000389328 NIPBLQ6KC79 2804 aaeCLIP8.18□□□□□ -1.1
TRAPPC9-201ENST00000389328 MMP24-AS1A0A0U1RRL7 71 aa8.17□□□□□ -1.1
TRAPPC9-201ENST00000389328 FAM229AH3BQW9 127 aa8.17□□□□□ -1.1
TRAPPC9-201ENST00000389328 KRTAP4-16G5E9R7 235 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC9-201ENST00000389328 Q75L30 129 aa8.15□□□□□ -1.1
TRAPPC9-201ENST00000389328 ZNF861PO60384 105 aa8.15□□□□□ -1.11
TRAPPC9-201ENST00000389328 UQCR11O14957 56 aa8.14□□□□□ -1.11
TRAPPC9-201ENST00000389328 RBM12B-AS1Q9P1G2 102 aa8.14□□□□□ -1.11
TRAPPC9-201ENST00000389328 PSORS1C2Q9UIG4 136 aa8.14□□□□□ -1.11
TRAPPC9-201ENST00000389328 LINC00472Q9H8W2 130 aa8.14□□□□□ -1.11
TRAPPC9-201ENST00000389328 ZCCHC13Q8WW36 166 aaKnown RBP8.13□□□□□ -1.11
TRAPPC9-201ENST00000389328 STAB2Q8WWQ8 2551 aa8.12□□□□□ -1.11
TRAPPC9-201ENST00000389328 MIR22HGQ0VDD5 57 aa8.12□□□□□ -1.11
TRAPPC9-201ENST00000389328 LCA10Q71F78 164 aa8.12□□□□□ -1.11
TRAPPC9-201ENST00000389328 Q96NJ1 140 aa8.08□□□□□ -1.12
TRAPPC9-201ENST00000389328 A0A087WTM6 91 aa8.08□□□□□ -1.12
TRAPPC9-201ENST00000389328 LINC01558Q9Y6Z2 57 aa8.08□□□□□ -1.12
TRAPPC9-201ENST00000389328 HRES1P13985 223 aa8.07□□□□□ -1.12
TRAPPC9-201ENST00000389328 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC9-201ENST00000389328 SPINK7P58062 85 aa8.07□□□□□ -1.12
TRAPPC9-201ENST00000389328 APLNQ9ULZ1 77 aa8.07□□□□□ -1.12
TRAPPC9-201ENST00000389328 KRTAP1-5Q9BYS1 174 aa8.07□□□□□ -1.12
TRAPPC9-201ENST00000389328 KRTAP29-1A8MX34 341 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC9-201ENST00000389328 A8MU10 97 aa8.04□□□□□ -1.12
TRAPPC9-201ENST00000389328 SPRR1BP22528 89 aa8.03□□□□□ -1.12
TRAPPC9-201ENST00000389328 SSBP3-AS1Q7Z2R9 100 aa8.03□□□□□ -1.12
TRAPPC9-201ENST00000389328 PRAC1Q96KF2 57 aa8.03□□□□□ -1.12
TRAPPC9-201ENST00000389328 KRTAP7-1Q8IUC3 87 aa8.02□□□□□ -1.13
TRAPPC9-201ENST00000389328 TYMSOSQ8TAI1 123 aa8.02□□□□□ -1.13
TRAPPC9-201ENST00000389328 LCE6AA0A183 80 aa8.01□□□□□ -1.13
TRAPPC9-201ENST00000389328 IGLV7-43P04211 117 aa8.01□□□□□ -1.13
TRAPPC9-201ENST00000389328 PLA2G1BP04054 148 aaKnown RBP7.97□□□□□ -1.13
TRAPPC9-201ENST00000389328 Q8N1X5 172 aa7.97□□□□□ -1.13
TRAPPC9-201ENST00000389328 WWC2-AS2Q96NR7 200 aa7.95□□□□□ -1.14
TRAPPC9-201ENST00000389328 KRTAP11-1Q8IUC1 163 aa7.94□□□□□ -1.14
TRAPPC9-201ENST00000389328 KMT2BQ9UMN6 2715 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC9-201ENST00000389328 PANO1I0J062 215 aa7.93□□□□□ -1.14
TRAPPC9-201ENST00000389328 A0A087X002 238 aa7.88□□□□□ -1.15
TRAPPC9-201ENST00000389328 NOTCH2NLQ7Z3S9 236 aa7.88□□□□□ -1.15
TRAPPC9-201ENST00000389328 Q5W150 140 aa7.87□□□□□ -1.15
TRAPPC9-201ENST00000389328 FLG2Q5D862 2391 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms