RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 A0A1W2PPM0 123 aa7.46□□□□□ -1.22
RPAIN-202ENST00000381208 H3BUT2 72 aa7.46□□□□□ -1.22
RPAIN-202ENST00000381208 SMCR5Q8TEV8 140 aa7.46□□□□□ -1.22
RPAIN-202ENST00000381208 SPANXDQ9BXN6 97 aa7.46□□□□□ -1.22
RPAIN-202ENST00000381208 SPANXCQ9NY87 97 aa7.46□□□□□ -1.22
RPAIN-202ENST00000381208 TRBV10-3A0A0K0K1G6 114 aa7.45□□□□□ -1.22
RPAIN-202ENST00000381208 KRTAP4-16G5E9R7 235 aaPredicted RBP7.45□□□□□ -1.22
RPAIN-202ENST00000381208 SPINK1P00995 79 aa7.45□□□□□ -1.22
RPAIN-202ENST00000381208 IFITM1P13164 125 aa7.45□□□□□ -1.22
RPAIN-202ENST00000381208 PPDPFQ9H3Y8 114 aa7.45□□□□□ -1.22
RPAIN-202ENST00000381208 LYRM7Q5U5X0 104 aa7.44□□□□□ -1.22
RPAIN-202ENST00000381208 K7EP34 96 aa7.43□□□□□ -1.22
RPAIN-202ENST00000381208 K7ERJ3 54 aa7.43□□□□□ -1.22
RPAIN-202ENST00000381208 LINC00483Q53H64 154 aa7.43□□□□□ -1.22
RPAIN-202ENST00000381208 Q8NBF4 154 aa7.43□□□□□ -1.22
RPAIN-202ENST00000381208 A0A0B4J2C4 111 aa7.42□□□□□ -1.22
RPAIN-202ENST00000381208 NDUFC2O95298 119 aa7.42□□□□□ -1.22
RPAIN-202ENST00000381208 DAND5Q8N907 189 aa7.42□□□□□ -1.22
RPAIN-202ENST00000381208 SPCS1Q9Y6A9 102 aa7.42□□□□□ -1.22
RPAIN-202ENST00000381208 B5MCH6 92 aa7.41□□□□□ -1.22
RPAIN-202ENST00000381208 SSBP3-AS1Q7Z2R9 100 aa7.41□□□□□ -1.22
RPAIN-202ENST00000381208 MUSTN1Q8IVN3 82 aa7.41□□□□□ -1.22
RPAIN-202ENST00000381208 LITAFQ99732 161 aa7.41□□□□□ -1.22
RPAIN-202ENST00000381208 RPS29P62273 56 aaKnown RBP7.4□□□□□ -1.22
RPAIN-202ENST00000381208 PRO1854Q9UHT4 67 aa7.4□□□□□ -1.22
RPAIN-202ENST00000381208 S100A7L2Q5SY68 101 aa7.39□□□□□ -1.23
RPAIN-202ENST00000381208 GAGE2AQ6NT46 116 aa7.39□□□□□ -1.23
RPAIN-202ENST00000381208 IGLV6-57P01721 117 aa7.38□□□□□ -1.23
RPAIN-202ENST00000381208 CFC1BP0CG36 223 aa7.38□□□□□ -1.23
RPAIN-202ENST00000381208 CFC1P0CG37 223 aa7.38□□□□□ -1.23
RPAIN-202ENST00000381208 ADAMTSL4-AS1Q5T5F5 129 aa7.38□□□□□ -1.23
RPAIN-202ENST00000381208 Q6ZRX8 168 aa7.38□□□□□ -1.23
RPAIN-202ENST00000381208 MUC17Q685J3 4493 aa7.38□□□□□ -1.23
RPAIN-202ENST00000381208 NPC2P61916 151 aa7.37□□□□□ -1.23
RPAIN-202ENST00000381208 NAA38Q9BRA0 125 aaKnown RBP7.36□□□□□ -1.23
RPAIN-202ENST00000381208 TRBV20-1A0A075B6N2 111 aa7.35□□□□□ -1.23
RPAIN-202ENST00000381208 TRAV23DV6A0A075B6W5 121 aa7.35□□□□□ -1.23
RPAIN-202ENST00000381208 MOBPQ13875 183 aa7.35□□□□□ -1.23
RPAIN-202ENST00000381208 IGLV9-49A0A0B4J1Y8 123 aa7.34□□□□□ -1.23
RPAIN-202ENST00000381208 ERC2-IT1O76042 136 aa7.34□□□□□ -1.23
RPAIN-202ENST00000381208 KRTAP13-3Q3SY46 172 aa7.34□□□□□ -1.23
RPAIN-202ENST00000381208 LINC00308Q8TCZ7 52 aa7.34□□□□□ -1.23
RPAIN-202ENST00000381208 Q9BRP9 147 aa7.34□□□□□ -1.23
RPAIN-202ENST00000381208 FAT4Q6V0I7 4981 aa7.34□□□□□ -1.23
RPAIN-202ENST00000381208 SLC25A20O43772 301 aa7.33□□□□□ -1.24
RPAIN-202ENST00000381208 ZNF73O43830 326 aaPredicted RBP7.33□□□□□ -1.24
RPAIN-202ENST00000381208 SOSTDC1Q6X4U4 206 aa7.33□□□□□ -1.24
RPAIN-202ENST00000381208 F8W1H4 67 aa7.33□□□□□ -1.24
RPAIN-202ENST00000381208 Q1RN00 199 aa7.33□□□□□ -1.24
RPAIN-202ENST00000381208 PSMB2P49721 201 aa7.32□□□□□ -1.24
RPAIN-202ENST00000381208 VPS25Q9BRG1 176 aa7.32□□□□□ -1.24
RPAIN-202ENST00000381208 COX6CP09669 75 aa7.31□□□□□ -1.24
RPAIN-202ENST00000381208 SCGB1C2P0DMR2 95 aa7.31□□□□□ -1.24
RPAIN-202ENST00000381208 SEC61BP60468 96 aaKnown RBP7.31□□□□□ -1.24
RPAIN-202ENST00000381208 ASB16-AS1Q495Z4 193 aa7.31□□□□□ -1.24
RPAIN-202ENST00000381208 Q8N377 158 aa7.31□□□□□ -1.24
RPAIN-202ENST00000381208 C9orf153Q5TBE3 101 aa7.3□□□□□ -1.24
RPAIN-202ENST00000381208 TRAV13-2A0A0B4J235 113 aa7.28□□□□□ -1.24
RPAIN-202ENST00000381208 H3BMG7 143 aa7.28□□□□□ -1.24
RPAIN-202ENST00000381208 DHRS4-AS1Q9P1J3 65 aa7.28□□□□□ -1.24
RPAIN-202ENST00000381208 H7C2G1 150 aa7.27□□□□□ -1.25
RPAIN-202ENST00000381208 K7ERU9 68 aa7.27□□□□□ -1.25
RPAIN-202ENST00000381208 ATXN8Q156A1 80 aa7.27□□□□□ -1.25
RPAIN-202ENST00000381208 SPRR1BP22528 89 aa7.26□□□□□ -1.25
RPAIN-202ENST00000381208 OR13C6PQ8NH95 151 aa7.26□□□□□ -1.25
RPAIN-202ENST00000381208 TCL1BO95988 128 aa7.25□□□□□ -1.25
RPAIN-202ENST00000381208 LIMD2Q9BT23 127 aa7.25□□□□□ -1.25
RPAIN-202ENST00000381208 TRIAP1O43715 76 aa7.24□□□□□ -1.25
RPAIN-202ENST00000381208 OCIAD2Q56VL3 154 aa7.24□□□□□ -1.25
RPAIN-202ENST00000381208 ST20-AS1Q8NBB2 130 aa7.24□□□□□ -1.25
RPAIN-202ENST00000381208 LAMTOR3Q9UHA4 124 aa7.24□□□□□ -1.25
RPAIN-202ENST00000381208 J3QR89 54 aa7.23□□□□□ -1.25
RPAIN-202ENST00000381208 PRO0461Q9UI25 63 aa7.23□□□□□ -1.25
RPAIN-202ENST00000381208 COX7BP24311 80 aa7.21□□□□□ -1.25
RPAIN-202ENST00000381208 LINC01547P58512 204 aaPredicted RBP7.21□□□□□ -1.25
RPAIN-202ENST00000381208 ELOF1P60002 83 aaKnown RBP7.21□□□□□ -1.25
RPAIN-202ENST00000381208 V9GYY9 64 aa7.2□□□□□ -1.26
RPAIN-202ENST00000381208 TRBV7-6A0A0J9YX20 115 aa7.2□□□□□ -1.26
RPAIN-202ENST00000381208 LST1O00453 97 aa7.2□□□□□ -1.26
RPAIN-202ENST00000381208 CD164Q04900 197 aa7.19□□□□□ -1.26
RPAIN-202ENST00000381208 C6orf99Q4VX62 202 aa7.19□□□□□ -1.26
RPAIN-202ENST00000381208 C9JAW5 83 aa7.18□□□□□ -1.26
RPAIN-202ENST00000381208 H3BT86 120 aa7.18□□□□□ -1.26
RPAIN-202ENST00000381208 TEN1Q86WV5 123 aa7.18□□□□□ -1.26
RPAIN-202ENST00000381208 TEX49A0A1B0GTD5 131 aa7.17□□□□□ -1.26
RPAIN-202ENST00000381208 H0YGX0 51 aa7.17□□□□□ -1.26
RPAIN-202ENST00000381208 ETDBQ3ZM63 59 aa7.17□□□□□ -1.26
RPAIN-202ENST00000381208 TRACP01848 142 aa7.16□□□□□ -1.26
RPAIN-202ENST00000381208 ANKRD29Q8N6D5 301 aa7.16□□□□□ -1.26
RPAIN-202ENST00000381208 PPDPFLQ8WWR9 84 aa7.15□□□□□ -1.26
RPAIN-202ENST00000381208 Q5XG85 94 aa7.14□□□□□ -1.27
RPAIN-202ENST00000381208 CLEC2BQ92478 149 aa7.14□□□□□ -1.27
RPAIN-202ENST00000381208 HRCT1Q6UXD1 115 aa7.13□□□□□ -1.27
RPAIN-202ENST00000381208 DEFB105AQ8NG35 78 aa7.13□□□□□ -1.27
RPAIN-202ENST00000381208 SMIM11BQ8TCY0 68 aa7.13□□□□□ -1.27
RPAIN-202ENST00000381208 KRTAP4-1Q9BYQ7 146 aa7.13□□□□□ -1.27
RPAIN-202ENST00000381208 A0A1B0GX51 115 aa7.12□□□□□ -1.27
RPAIN-202ENST00000381208 SNCGO76070 127 aa7.12□□□□□ -1.27
RPAIN-202ENST00000381208 SMIM20Q8N5G0 67 aa7.12□□□□□ -1.27
RPAIN-202ENST00000381208 IGLV5-48A0A075B6I7 105 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms