RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 FABP4P15090 132 aa8.51□□□□□ -1.05
HMGN1-203ENST00000380748 KRTAP16-1A8MUX0 517 aa8.5□□□□□ -1.05
HMGN1-203ENST00000380748 Q6JHZ5 121 aa8.5□□□□□ -1.05
HMGN1-203ENST00000380748 MPLKIPQ8TAP9 179 aa8.5□□□□□ -1.05
HMGN1-203ENST00000380748 HSPB8Q9UJY1 196 aa8.5□□□□□ -1.05
HMGN1-203ENST00000380748 LST1O00453 97 aa8.48□□□□□ -1.05
HMGN1-203ENST00000380748 NHP2Q9NX24 153 aaKnown RBP8.48□□□□□ -1.05
HMGN1-203ENST00000380748 A4D1N5 150 aa8.47□□□□□ -1.05
HMGN1-203ENST00000380748 A6NDN8 102 aa8.47□□□□□ -1.05
HMGN1-203ENST00000380748 HRES1P13985 223 aa8.47□□□□□ -1.05
HMGN1-203ENST00000380748 YPEL4Q96NS1 127 aa8.47□□□□□ -1.05
HMGN1-203ENST00000380748 RBM12B-AS1Q9P1G2 102 aa8.47□□□□□ -1.05
HMGN1-203ENST00000380748 TTTY13Q9BZ97 58 aa8.46□□□□□ -1.06
HMGN1-203ENST00000380748 ZNF815PA8K554 130 aa8.45□□□□□ -1.06
HMGN1-203ENST00000380748 SLC7A5P1Q8MH63 180 aa8.43□□□□□ -1.06
HMGN1-203ENST00000380748 TRAV13-2A0A0B4J235 113 aa8.42□□□□□ -1.06
HMGN1-203ENST00000380748 KRTAP20-1Q3LI63 56 aa8.42□□□□□ -1.06
HMGN1-203ENST00000380748 OCIAD2Q56VL3 154 aa8.42□□□□□ -1.06
HMGN1-203ENST00000380748 SMIM11BQ8TCY0 68 aa8.41□□□□□ -1.06
HMGN1-203ENST00000380748 APOC3P02656 99 aa8.4□□□□□ -1.06
HMGN1-203ENST00000380748 DSCR10P59022 87 aa8.4□□□□□ -1.06
HMGN1-203ENST00000380748 Q6ZQY7 126 aa8.4□□□□□ -1.06
HMGN1-203ENST00000380748 TRGC2P03986 189 aa8.37□□□□□ -1.07
HMGN1-203ENST00000380748 SNAPINO95295 136 aa8.36□□□□□ -1.07
HMGN1-203ENST00000380748 LINC00575Q6W349 94 aa8.36□□□□□ -1.07
HMGN1-203ENST00000380748 NOTCH2NLQ7Z3S9 236 aa8.36□□□□□ -1.07
HMGN1-203ENST00000380748 H3BUT2 72 aa8.35□□□□□ -1.07
HMGN1-203ENST00000380748 Q8N9P0 234 aaPredicted RBP8.35□□□□□ -1.07
HMGN1-203ENST00000380748 SS18L2Q9UHA2 77 aa8.34□□□□□ -1.07
HMGN1-203ENST00000380748 SVBPQ8N300 66 aa8.33□□□□□ -1.08
HMGN1-203ENST00000380748 hADV29S1A0JD25 119 aa8.32□□□□□ -1.08
HMGN1-203ENST00000380748 IFITM1P13164 125 aa8.32□□□□□ -1.08
HMGN1-203ENST00000380748 SCGB1D4Q6XE38 83 aa8.32□□□□□ -1.08
HMGN1-203ENST00000380748 MUSTN1Q8IVN3 82 aa8.32□□□□□ -1.08
HMGN1-203ENST00000380748 COPS9Q8WXC6 57 aa8.32□□□□□ -1.08
HMGN1-203ENST00000380748 SYS1-DBNDD2H3BUS1 97 aa8.31□□□□□ -1.08
HMGN1-203ENST00000380748 Q6ZVH6 145 aa8.31□□□□□ -1.08
HMGN1-203ENST00000380748 VAMP3Q15836 100 aa8.3□□□□□ -1.08
HMGN1-203ENST00000380748 A8MWP4 228 aa8.28□□□□□ -1.08
HMGN1-203ENST00000380748 NDUFA5Q16718 116 aa8.28□□□□□ -1.08
HMGN1-203ENST00000380748 ANKRD39Q53RE8 183 aa8.28□□□□□ -1.08
HMGN1-203ENST00000380748 LINC01545Q5VT33 79 aa8.27□□□□□ -1.09
HMGN1-203ENST00000380748 SNHG12Q9BXW3 62 aa8.26□□□□□ -1.09
HMGN1-203ENST00000380748 MDN1Q9NU22 5596 aa8.26□□□□□ -1.09
HMGN1-203ENST00000380748 A0A087WSZ3 146 aa8.25□□□□□ -1.09
HMGN1-203ENST00000380748 LINC00313P59037 77 aa8.25□□□□□ -1.09
HMGN1-203ENST00000380748 MTURNQ8N3F0 131 aa8.25□□□□□ -1.09
HMGN1-203ENST00000380748 SIGMAR1Q99720 223 aa8.25□□□□□ -1.09
HMGN1-203ENST00000380748 COLCA2A8K830 154 aa8.24□□□□□ -1.09
HMGN1-203ENST00000380748 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.24□□□□□ -1.09
HMGN1-203ENST00000380748 SCGB1D1O95968 90 aa8.23□□□□□ -1.09
HMGN1-203ENST00000380748 PPDPFLQ8WWR9 84 aa8.23□□□□□ -1.09
HMGN1-203ENST00000380748 TEN1Q86WV5 123 aa8.22□□□□□ -1.09
HMGN1-203ENST00000380748 PET117Q6UWS5 81 aa8.2□□□□□ -1.1
HMGN1-203ENST00000380748 KMT2DO14686 5537 aa8.17□□□□□ -1.1
HMGN1-203ENST00000380748 IGKV4-1P06312 121 aa8.13□□□□□ -1.11
HMGN1-203ENST00000380748 C3orf79P0CE67 100 aa8.13□□□□□ -1.11
HMGN1-203ENST00000380748 KRTAP4-8Q9BYQ9 185 aa8.13□□□□□ -1.11
HMGN1-203ENST00000380748 SPINK7P58062 85 aa8.11□□□□□ -1.11
HMGN1-203ENST00000380748 A6NN06 94 aa8.09□□□□□ -1.11
HMGN1-203ENST00000380748 NDUFV3P56181 108 aaKnown RBP8.09□□□□□ -1.11
HMGN1-203ENST00000380748 IGHV6-1A0A0B4J1U7 121 aa8.07□□□□□ -1.12
HMGN1-203ENST00000380748 A0A1W2PNM2 257 aa8.07□□□□□ -1.12
HMGN1-203ENST00000380748 BVES-AS1Q5T3Y7 98 aa8.07□□□□□ -1.12
HMGN1-203ENST00000380748 ATOH7Q8N100 152 aa8.07□□□□□ -1.12
HMGN1-203ENST00000380748 KRTAP5-9P26371 169 aa8.06□□□□□ -1.12
HMGN1-203ENST00000380748 KRTDAPP60985 99 aa8.06□□□□□ -1.12
HMGN1-203ENST00000380748 DEFB116Q30KQ4 102 aa8.06□□□□□ -1.12
HMGN1-203ENST00000380748 C12orf57Q99622 126 aa8.06□□□□□ -1.12
HMGN1-203ENST00000380748 ZCCHC13Q8WW36 166 aaKnown RBP8.05□□□□□ -1.12
HMGN1-203ENST00000380748 WFDC13Q8IUB5 93 aa8.04□□□□□ -1.12
HMGN1-203ENST00000380748 H3BMG7 143 aa8.03□□□□□ -1.12
HMGN1-203ENST00000380748 HIST1H2BKO60814 126 aa8.02□□□□□ -1.13
HMGN1-203ENST00000380748 HIST1H2BJP06899 126 aa8.02□□□□□ -1.13
HMGN1-203ENST00000380748 HIST1H2BOP23527 126 aa8.02□□□□□ -1.13
HMGN1-203ENST00000380748 HIST1H2BBP33778 126 aa8.02□□□□□ -1.13
HMGN1-203ENST00000380748 HIST1H2BDP58876 126 aa8.02□□□□□ -1.13
HMGN1-203ENST00000380748 HIST1H2BCP62807 126 aa8.02□□□□□ -1.13
HMGN1-203ENST00000380748 HIST2H2BEQ16778 126 aa8.02□□□□□ -1.13
HMGN1-203ENST00000380748 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.02□□□□□ -1.13
HMGN1-203ENST00000380748 HIST1H2BHQ93079 126 aa8.02□□□□□ -1.13
HMGN1-203ENST00000380748 HIST1H2BNQ99877 126 aa8.02□□□□□ -1.13
HMGN1-203ENST00000380748 HIST1H2BMQ99879 126 aa8.02□□□□□ -1.13
HMGN1-203ENST00000380748 KRTAP2-3P0C7H8 128 aa8□□□□□ -1.13
HMGN1-203ENST00000380748 KRTAP2-4Q9BYR9 128 aa8□□□□□ -1.13
HMGN1-203ENST00000380748 LINC00472Q9H8W2 130 aa7.99□□□□□ -1.13
HMGN1-203ENST00000380748 FAM218AQ96MZ4 157 aa7.97□□□□□ -1.13
HMGN1-203ENST00000380748 MT1BP07438 61 aa7.95□□□□□ -1.14
HMGN1-203ENST00000380748 FABP2P12104 132 aa7.94□□□□□ -1.14
HMGN1-203ENST00000380748 TRBV7-4A0A0J9YYF1 115 aa7.93□□□□□ -1.14
HMGN1-203ENST00000380748 C8orf87E5RJ46 101 aa7.93□□□□□ -1.14
HMGN1-203ENST00000380748 H3BS24 57 aa7.93□□□□□ -1.14
HMGN1-203ENST00000380748 A0A1B0GVX0 72 aa7.92□□□□□ -1.14
HMGN1-203ENST00000380748 SNCGO76070 127 aa7.92□□□□□ -1.14
HMGN1-203ENST00000380748 RAB37Q96AX2 223 aa7.91□□□□□ -1.14
HMGN1-203ENST00000380748 A0A1B0GV72 72 aa7.89□□□□□ -1.15
HMGN1-203ENST00000380748 ANKRD29Q8N6D5 301 aa7.89□□□□□ -1.15
HMGN1-203ENST00000380748 KRTAP10-5P60370 271 aa7.88□□□□□ -1.15
HMGN1-203ENST00000380748 H1FX-AS1Q4G0G2 97 aa7.88□□□□□ -1.15
HMGN1-203ENST00000380748 H0YGX0 51 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms