RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 TMEM254Q8TBM7 123 aa4.29□□□□□ -1.72
NEDD9-202ENST00000379446 ANAPC11Q9NYG5 84 aa4.29□□□□□ -1.72
NEDD9-202ENST00000379446 C6orf48Q9UBA6 75 aa4.29□□□□□ -1.72
NEDD9-202ENST00000379446 PMAIP1Q13794 54 aa4.29□□□□□ -1.72
NEDD9-202ENST00000379446 Q6ZSA8 131 aa4.29□□□□□ -1.72
NEDD9-202ENST00000379446 IGKV2D-30A0A075B6S6 120 aa4.28□□□□□ -1.72
NEDD9-202ENST00000379446 IGKV2-30P06310 120 aa4.28□□□□□ -1.72
NEDD9-202ENST00000379446 ZNF861PO60384 105 aa4.28□□□□□ -1.72
NEDD9-202ENST00000379446 IGLV7-43P04211 117 aa4.28□□□□□ -1.72
NEDD9-202ENST00000379446 CSMD2Q7Z408 3487 aa4.28□□□□□ -1.72
NEDD9-202ENST00000379446 FAM168BA1KXE4 195 aa4.27□□□□□ -1.73
NEDD9-202ENST00000379446 Q96NJ1 140 aa4.27□□□□□ -1.73
NEDD9-202ENST00000379446 GVQW2A0A096LPI5 108 aaPredicted RBP4.27□□□□□ -1.73
NEDD9-202ENST00000379446 KRTAP10-2P60368 255 aa4.27□□□□□ -1.73
NEDD9-202ENST00000379446 DEFB116Q30KQ4 102 aa4.27□□□□□ -1.73
NEDD9-202ENST00000379446 SPINK1P00995 79 aa4.26□□□□□ -1.73
NEDD9-202ENST00000379446 SERTAD4-AS1Q5TG53 156 aa4.26□□□□□ -1.73
NEDD9-202ENST00000379446 ZFHX3Q15911 3703 aa4.26□□□□□ -1.73
NEDD9-202ENST00000379446 VPS13CQ709C8 3753 aa4.26□□□□□ -1.73
NEDD9-202ENST00000379446 VWFP04275 2813 aa4.26□□□□□ -1.73
NEDD9-202ENST00000379446 FP248Q71RG6 208 aaPredicted RBP4.26□□□□□ -1.73
NEDD9-202ENST00000379446 Q8NBF4 154 aa4.26□□□□□ -1.73
NEDD9-202ENST00000379446 KRTAP10-1P60331 282 aa4.25□□□□□ -1.73
NEDD9-202ENST00000379446 NDUFC1O43677 76 aa4.25□□□□□ -1.73
NEDD9-202ENST00000379446 FAM229BQ4G0N7 80 aa4.24□□□□□ -1.73
NEDD9-202ENST00000379446 VPREB1P12018 145 aa4.24□□□□□ -1.73
NEDD9-202ENST00000379446 TGP01266 2768 aa4.24□□□□□ -1.73
NEDD9-202ENST00000379446 LINC00612Q8N6U2 182 aa4.23□□□□□ -1.73
NEDD9-202ENST00000379446 LINC01600Q96MT4 127 aa4.23□□□□□ -1.73
NEDD9-202ENST00000379446 hDV103S1A0JD37 113 aa4.23□□□□□ -1.73
NEDD9-202ENST00000379446 LINC00575Q6W349 94 aa4.23□□□□□ -1.73
NEDD9-202ENST00000379446 RBM12B-AS1Q9P1G2 102 aa4.23□□□□□ -1.73
NEDD9-202ENST00000379446 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.22□□□□□ -1.73
NEDD9-202ENST00000379446 IGLV1-50A0A075B6I6 118 aa4.22□□□□□ -1.73
NEDD9-202ENST00000379446 Q6ZQT0 140 aa4.22□□□□□ -1.73
NEDD9-202ENST00000379446 IGLV5-37A0A075B6J1 123 aa4.21□□□□□ -1.74
NEDD9-202ENST00000379446 A6NED7 52 aa4.21□□□□□ -1.74
NEDD9-202ENST00000379446 SMIM29Q86T20 159 aa4.21□□□□□ -1.74
NEDD9-202ENST00000379446 SEC61BP60468 96 aaKnown RBP4.2□□□□□ -1.74
NEDD9-202ENST00000379446 KLKP1Q107X0 134 aa4.2□□□□□ -1.74
NEDD9-202ENST00000379446 KIAA0087Q14695 138 aa4.2□□□□□ -1.74
NEDD9-202ENST00000379446 A8MUN3 132 aa4.2□□□□□ -1.74
NEDD9-202ENST00000379446 ATP5EP56381 51 aaPredicted RBP4.2□□□□□ -1.74
NEDD9-202ENST00000379446 Q8N1X5 172 aa4.2□□□□□ -1.74
NEDD9-202ENST00000379446 PRR15LQ9BU68 103 aa4.2□□□□□ -1.74
NEDD9-202ENST00000379446 A0A1W2PNN7 141 aa4.19□□□□□ -1.74
NEDD9-202ENST00000379446 IGLV6-57P01721 117 aa4.19□□□□□ -1.74
NEDD9-202ENST00000379446 C15orf56Q8N910 161 aa4.19□□□□□ -1.74
NEDD9-202ENST00000379446 SSBP3-AS1Q7Z2R9 100 aa4.19□□□□□ -1.74
NEDD9-202ENST00000379446 OBSCN-AS1Q96MR7 158 aa4.19□□□□□ -1.74
NEDD9-202ENST00000379446 LINC00313P59037 77 aa4.18□□□□□ -1.74
NEDD9-202ENST00000379446 Q8NDZ9 215 aa4.18□□□□□ -1.74
NEDD9-202ENST00000379446 LINC00208Q96KT6 92 aa4.18□□□□□ -1.74
NEDD9-202ENST00000379446 IGLV8-61A0A075B6I0 122 aa4.18□□□□□ -1.74
NEDD9-202ENST00000379446 CNBPP62633 177 aaKnown RBP4.17□□□□□ -1.74
NEDD9-202ENST00000379446 ST20-AS1Q8NBB2 130 aa4.17□□□□□ -1.74
NEDD9-202ENST00000379446 CXCL6P80162 114 aa4.17□□□□□ -1.74
NEDD9-202ENST00000379446 KRTAP1-5Q9BYS1 174 aa4.16□□□□□ -1.74
NEDD9-202ENST00000379446 PRR34Q9NV39 138 aa4.16□□□□□ -1.74
NEDD9-202ENST00000379446 C1orf64Q8NEQ6 169 aa4.16□□□□□ -1.74
NEDD9-202ENST00000379446 K7ERS5 55 aa4.15□□□□□ -1.75
NEDD9-202ENST00000379446 A0A0G2JQZ4 141 aa4.14□□□□□ -1.75
NEDD9-202ENST00000379446 Q6ZRX8 168 aa4.14□□□□□ -1.75
NEDD9-202ENST00000379446 TRAV22A0A0B4J277 110 aa4.14□□□□□ -1.75
NEDD9-202ENST00000379446 TRBV7-4A0A0J9YYF1 115 aa4.13□□□□□ -1.75
NEDD9-202ENST00000379446 PCOTHQ58A44 107 aa4.13□□□□□ -1.75
NEDD9-202ENST00000379446 Q6ZR54 194 aa4.13□□□□□ -1.75
NEDD9-202ENST00000379446 LOC110117498A0A087WWA1 95 aa4.13□□□□□ -1.75
NEDD9-202ENST00000379446 A8MU10 97 aa4.11□□□□□ -1.75
NEDD9-202ENST00000379446 HCG22E2RYF7 251 aa4.11□□□□□ -1.75
NEDD9-202ENST00000379446 ELOF1P60002 83 aaKnown RBP4.11□□□□□ -1.75
NEDD9-202ENST00000379446 DSCR10P59022 87 aa4.09□□□□□ -1.75
NEDD9-202ENST00000379446 FBN3Q75N90 2809 aa4.09□□□□□ -1.75
NEDD9-202ENST00000379446 K7EQZ3 153 aa4.09□□□□□ -1.75
NEDD9-202ENST00000379446 PLAC8Q9NZF1 115 aa4.09□□□□□ -1.75
NEDD9-202ENST00000379446 NBPF19A0A087WUL8 3843 aa4.09□□□□□ -1.76
NEDD9-202ENST00000379446 LINC01554Q52M75 96 aa4.08□□□□□ -1.76
NEDD9-202ENST00000379446 SPRR4Q96PI1 79 aa4.08□□□□□ -1.76
NEDD9-202ENST00000379446 CD164Q04900 197 aa4.08□□□□□ -1.76
NEDD9-202ENST00000379446 C7orf65Q6ZTY9 151 aa4.08□□□□□ -1.76
NEDD9-202ENST00000379446 PDZD2O15018 2839 aa4.08□□□□□ -1.76
NEDD9-202ENST00000379446 OCR1Q9BZK8 76 aa4.07□□□□□ -1.76
NEDD9-202ENST00000379446 H0Y9P7 68 aa4.07□□□□□ -1.76
NEDD9-202ENST00000379446 FBN1P35555 2871 aaKnown RBP4.06□□□□□ -1.76
NEDD9-202ENST00000379446 PRR15Q8IV56 129 aa4.06□□□□□ -1.76
NEDD9-202ENST00000379446 ZNF469Q96JG9 3925 aaPredicted RBP4.04□□□□□ -1.76
NEDD9-202ENST00000379446 TLX1NBP0CAT3 122 aa4.04□□□□□ -1.76
NEDD9-202ENST00000379446 Q8N377 158 aa4.04□□□□□ -1.76
NEDD9-202ENST00000379446 A0A1B0GW54 56 aa4.03□□□□□ -1.76
NEDD9-202ENST00000379446 ERC2-IT1O76042 136 aa4.03□□□□□ -1.76
NEDD9-202ENST00000379446 KTN1-AS1Q86SY8 53 aa4.03□□□□□ -1.76
NEDD9-202ENST00000379446 OTOGQ6ZRI0 2925 aa4.03□□□□□ -1.76
NEDD9-202ENST00000379446 A0A1W2PNM2 257 aa4.02□□□□□ -1.77
NEDD9-202ENST00000379446 C8orf87E5RJ46 101 aa4.02□□□□□ -1.77
NEDD9-202ENST00000379446 KCNQ1DNQ9H478 68 aa4.02□□□□□ -1.77
NEDD9-202ENST00000379446 PRAC1Q96KF2 57 aa4.01□□□□□ -1.77
NEDD9-202ENST00000379446 Q1T7F1 81 aa4□□□□□ -1.77
NEDD9-202ENST00000379446 KRTAP26-1Q6PEX3 210 aa4□□□□□ -1.77
NEDD9-202ENST00000379446 IGFL1Q6UW32 110 aa4□□□□□ -1.77
NEDD9-202ENST00000379446 Q5VV11 94 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms