RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 MOBPQ13875 183 aa6.86□□□□□ -1.31
DEPDC4-202ENST00000378244 TRIAP1O43715 76 aa6.85□□□□□ -1.31
DEPDC4-202ENST00000378244 BATFQ16520 125 aa6.85□□□□□ -1.31
DEPDC4-202ENST00000378244 Q6ZQY7 126 aa6.85□□□□□ -1.31
DEPDC4-202ENST00000378244 C9orf153Q5TBE3 101 aa6.85□□□□□ -1.31
DEPDC4-202ENST00000378244 M0R143 59 aa6.84□□□□□ -1.31
DEPDC4-202ENST00000378244 FAM218AQ96MZ4 157 aa6.84□□□□□ -1.31
DEPDC4-202ENST00000378244 TEX49A0A1B0GTD5 131 aa6.83□□□□□ -1.32
DEPDC4-202ENST00000378244 LINC00304Q8N9R0 145 aa6.83□□□□□ -1.32
DEPDC4-202ENST00000378244 LINC01547P58512 204 aaPredicted RBP6.83□□□□□ -1.32
DEPDC4-202ENST00000378244 Q8NBF4 154 aa6.83□□□□□ -1.32
DEPDC4-202ENST00000378244 CLEC2BQ92478 149 aa6.83□□□□□ -1.32
DEPDC4-202ENST00000378244 H0YGX0 51 aa6.82□□□□□ -1.32
DEPDC4-202ENST00000378244 Q8N377 158 aa6.82□□□□□ -1.32
DEPDC4-202ENST00000378244 NAA38Q9BRA0 125 aaKnown RBP6.82□□□□□ -1.32
DEPDC4-202ENST00000378244 LAMTOR3Q9UHA4 124 aa6.82□□□□□ -1.32
DEPDC4-202ENST00000378244 IGLV5-48A0A075B6I7 105 aa6.81□□□□□ -1.32
DEPDC4-202ENST00000378244 SPRR1BP22528 89 aa6.81□□□□□ -1.32
DEPDC4-202ENST00000378244 PRO0628Q9UI54 55 aa6.81□□□□□ -1.32
DEPDC4-202ENST00000378244 COX6CP09669 75 aa6.8□□□□□ -1.32
DEPDC4-202ENST00000378244 SNCGO76070 127 aa6.79□□□□□ -1.32
DEPDC4-202ENST00000378244 SCGB1C2P0DMR2 95 aa6.79□□□□□ -1.32
DEPDC4-202ENST00000378244 SMIM29Q86T20 159 aa6.79□□□□□ -1.32
DEPDC4-202ENST00000378244 CD164Q04900 197 aa6.79□□□□□ -1.32
DEPDC4-202ENST00000378244 A0A0G2JQZ4 141 aa6.78□□□□□ -1.32
DEPDC4-202ENST00000378244 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.78□□□□□ -1.32
DEPDC4-202ENST00000378244 OCIAD2Q56VL3 154 aa6.77□□□□□ -1.33
DEPDC4-202ENST00000378244 HRCT1Q6UXD1 115 aa6.77□□□□□ -1.33
DEPDC4-202ENST00000378244 SSBP3-AS1Q7Z2R9 100 aa6.77□□□□□ -1.33
DEPDC4-202ENST00000378244 RETNLBQ9BQ08 111 aa6.77□□□□□ -1.33
DEPDC4-202ENST00000378244 K7ERU9 68 aa6.77□□□□□ -1.33
DEPDC4-202ENST00000378244 HMCN2Q8NDA2 5059 aa6.77□□□□□ -1.33
DEPDC4-202ENST00000378244 SNHG12Q9BXW3 62 aa6.76□□□□□ -1.33
DEPDC4-202ENST00000378244 F8WEM9 126 aa6.75□□□□□ -1.33
DEPDC4-202ENST00000378244 DNAL4O96015 105 aa6.75□□□□□ -1.33
DEPDC4-202ENST00000378244 C1orf195Q5TG92 126 aa6.75□□□□□ -1.33
DEPDC4-202ENST00000378244 FABP2P12104 132 aa6.74□□□□□ -1.33
DEPDC4-202ENST00000378244 PRR4Q16378 134 aa6.74□□□□□ -1.33
DEPDC4-202ENST00000378244 SPAG11AQ6PDA7 123 aa6.74□□□□□ -1.33
DEPDC4-202ENST00000378244 A0A1B0GX51 115 aa6.72□□□□□ -1.33
DEPDC4-202ENST00000378244 SPINK1P00995 79 aa6.72□□□□□ -1.33
DEPDC4-202ENST00000378244 H3BUT2 72 aa6.72□□□□□ -1.33
DEPDC4-202ENST00000378244 LST1O00453 97 aa6.7□□□□□ -1.34
DEPDC4-202ENST00000378244 ORMDL1Q9P0S3 153 aa6.7□□□□□ -1.34
DEPDC4-202ENST00000378244 TCL1BO95988 128 aa6.7□□□□□ -1.34
DEPDC4-202ENST00000378244 NDUFV3P56181 108 aaKnown RBP6.7□□□□□ -1.34
DEPDC4-202ENST00000378244 LRP2P98164 4655 aa6.69□□□□□ -1.34
DEPDC4-202ENST00000378244 PPDPFLQ8WWR9 84 aa6.69□□□□□ -1.34
DEPDC4-202ENST00000378244 TAX1BP3O14907 124 aa6.68□□□□□ -1.34
DEPDC4-202ENST00000378244 H3BMG7 143 aa6.68□□□□□ -1.34
DEPDC4-202ENST00000378244 TRACP01848 142 aa6.68□□□□□ -1.34
DEPDC4-202ENST00000378244 Q75L30 129 aa6.68□□□□□ -1.34
DEPDC4-202ENST00000378244 IGFL1Q6UW32 110 aa6.67□□□□□ -1.34
DEPDC4-202ENST00000378244 LPAP08519 4548 aa6.67□□□□□ -1.34
DEPDC4-202ENST00000378244 C9orf118A6NHY6 69 aa6.66□□□□□ -1.34
DEPDC4-202ENST00000378244 ATXN8Q156A1 80 aa6.66□□□□□ -1.34
DEPDC4-202ENST00000378244 UBR4Q5T4S7 5183 aa6.65□□□□□ -1.34
DEPDC4-202ENST00000378244 TMEM256-PLSCR3K7ERE1 68 aa6.65□□□□□ -1.34
DEPDC4-202ENST00000378244 IGLV8-61A0A075B6I0 122 aa6.65□□□□□ -1.35
DEPDC4-202ENST00000378244 Q6JHZ5 121 aa6.65□□□□□ -1.35
DEPDC4-202ENST00000378244 BAALC-AS2P0C853 105 aa6.64□□□□□ -1.35
DEPDC4-202ENST00000378244 A0A1W2PPM0 123 aa6.64□□□□□ -1.35
DEPDC4-202ENST00000378244 LYRM7Q5U5X0 104 aa6.64□□□□□ -1.35
DEPDC4-202ENST00000378244 IGLV7-46A0A075B6I9 117 aa6.63□□□□□ -1.35
DEPDC4-202ENST00000378244 RPS29P62273 56 aaKnown RBP6.63□□□□□ -1.35
DEPDC4-202ENST00000378244 COL5A1-AS1Q5SY13 56 aa6.63□□□□□ -1.35
DEPDC4-202ENST00000378244 LIMD2Q9BT23 127 aa6.62□□□□□ -1.35
DEPDC4-202ENST00000378244 TRBV20-1A0A075B6N2 111 aa6.61□□□□□ -1.35
DEPDC4-202ENST00000378244 ANKRD29Q8N6D5 301 aa6.61□□□□□ -1.35
DEPDC4-202ENST00000378244 C9JAW5 83 aa6.61□□□□□ -1.35
DEPDC4-202ENST00000378244 FAM236DA0A1B0GTK5 79 aa6.6□□□□□ -1.35
DEPDC4-202ENST00000378244 FAM240AA0A1B0GVK7 77 aa6.6□□□□□ -1.35
DEPDC4-202ENST00000378244 H3BQ85 93 aa6.6□□□□□ -1.35
DEPDC4-202ENST00000378244 FAM236CP0DP71 79 aa6.6□□□□□ -1.35
DEPDC4-202ENST00000378244 TRBV7-7A0A0K0K1E9 115 aa6.59□□□□□ -1.36
DEPDC4-202ENST00000378244 SPCS1Q9Y6A9 102 aa6.58□□□□□ -1.36
DEPDC4-202ENST00000378244 RBM3P98179 157 aaKnown RBP6.56□□□□□ -1.36
DEPDC4-202ENST00000378244 FP248Q71RG6 208 aaPredicted RBP6.56□□□□□ -1.36
DEPDC4-202ENST00000378244 TEN1Q86WV5 123 aa6.56□□□□□ -1.36
DEPDC4-202ENST00000378244 A0A087WSZ3 146 aa6.56□□□□□ -1.36
DEPDC4-202ENST00000378244 A0A1W2PNM2 257 aa6.56□□□□□ -1.36
DEPDC4-202ENST00000378244 J3KT08 172 aa6.55□□□□□ -1.36
DEPDC4-202ENST00000378244 CCKP06307 115 aa6.55□□□□□ -1.36
DEPDC4-202ENST00000378244 RPS28P62857 69 aaKnown RBP6.55□□□□□ -1.36
DEPDC4-202ENST00000378244 DSCR8Q96T75 97 aa6.55□□□□□ -1.36
DEPDC4-202ENST00000378244 Q5XG85 94 aa6.54□□□□□ -1.36
DEPDC4-202ENST00000378244 RNF213Q63HN8 5207 aa6.54□□□□□ -1.36
DEPDC4-202ENST00000378244 TPRXLQ17RH7 258 aa6.53□□□□□ -1.36
DEPDC4-202ENST00000378244 TRBV7-4A0A0J9YYF1 115 aa6.53□□□□□ -1.36
DEPDC4-202ENST00000378244 PMAIP1Q13794 54 aa6.53□□□□□ -1.36
DEPDC4-202ENST00000378244 Q6Q795 121 aa6.52□□□□□ -1.37
DEPDC4-202ENST00000378244 KRTAP13-3Q3SY46 172 aa6.51□□□□□ -1.37
DEPDC4-202ENST00000378244 C14orf132Q9NPU4 83 aa6.51□□□□□ -1.37
DEPDC4-202ENST00000378244 C9orf92A6NGG3 77 aa6.51□□□□□ -1.37
DEPDC4-202ENST00000378244 JMJD7-PLA2G4BH0Y9G9 81 aa6.5□□□□□ -1.37
DEPDC4-202ENST00000378244 K7EP34 96 aa6.49□□□□□ -1.37
DEPDC4-202ENST00000378244 H3BT86 120 aa6.49□□□□□ -1.37
DEPDC4-202ENST00000378244 MUC2Q02817 5179 aa6.47□□□□□ -1.37
DEPDC4-202ENST00000378244 DEFB116Q30KQ4 102 aa6.47□□□□□ -1.37
DEPDC4-202ENST00000378244 ASB16-AS1Q495Z4 193 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms