RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 PCLOQ9Y6V0 5065 aa12.59□□□□□ -0.39
CBWD3-202ENST00000377342 TNXBP22105 4242 aa12.59□□□□□ -0.39
CBWD3-202ENST00000377342 OCIAD2Q56VL3 154 aa12.59□□□□□ -0.39
CBWD3-202ENST00000377342 ORMDL1Q9P0S3 153 aa12.58□□□□□ -0.4
CBWD3-202ENST00000377342 CRYGAP11844 174 aa12.57□□□□□ -0.4
CBWD3-202ENST00000377342 PPDPFLQ8WWR9 84 aa12.57□□□□□ -0.4
CBWD3-202ENST00000377342 H3BMG7 143 aa12.56□□□□□ -0.4
CBWD3-202ENST00000377342 K7EP34 96 aa12.56□□□□□ -0.4
CBWD3-202ENST00000377342 IGLV9-49A0A0B4J1Y8 123 aa12.53□□□□□ -0.4
CBWD3-202ENST00000377342 C9JAW5 83 aa12.53□□□□□ -0.4
CBWD3-202ENST00000377342 OXTP01178 125 aa12.53□□□□□ -0.4
CBWD3-202ENST00000377342 MT1HL1P0DM35 61 aa12.53□□□□□ -0.4
CBWD3-202ENST00000377342 LAMTOR3Q9UHA4 124 aa12.52□□□□□ -0.4
CBWD3-202ENST00000377342 KRTAP29-1A8MX34 341 aaPredicted RBP12.51□□□□□ -0.41
CBWD3-202ENST00000377342 KRTAP10-8P60410 259 aa12.51□□□□□ -0.41
CBWD3-202ENST00000377342 MOBPQ13875 183 aa12.51□□□□□ -0.41
CBWD3-202ENST00000377342 MTURNQ8N3F0 131 aa12.51□□□□□ -0.41
CBWD3-202ENST00000377342 TMEM256-PLSCR3K7ERE1 68 aa12.49□□□□□ -0.41
CBWD3-202ENST00000377342 GHRHP01286 108 aa12.49□□□□□ -0.41
CBWD3-202ENST00000377342 BAALC-AS2P0C853 105 aa12.49□□□□□ -0.41
CBWD3-202ENST00000377342 H3BQ85 93 aa12.48□□□□□ -0.41
CBWD3-202ENST00000377342 NDUFV3P56181 108 aaKnown RBP12.48□□□□□ -0.41
CBWD3-202ENST00000377342 C9orf153Q5TBE3 101 aa12.48□□□□□ -0.41
CBWD3-202ENST00000377342 Q8NBF4 154 aa12.48□□□□□ -0.41
CBWD3-202ENST00000377342 TYMSOSQ8TAI1 123 aa12.47□□□□□ -0.41
CBWD3-202ENST00000377342 A0A1B0GV90 55 aa12.46□□□□□ -0.41
CBWD3-202ENST00000377342 UBE2V1Q13404 147 aa12.45□□□□□ -0.42
CBWD3-202ENST00000377342 GTF2H5Q6ZYL4 71 aa12.45□□□□□ -0.42
CBWD3-202ENST00000377342 IGLV8-61A0A075B6I0 122 aa12.44□□□□□ -0.42
CBWD3-202ENST00000377342 F8WEM9 126 aa12.44□□□□□ -0.42
CBWD3-202ENST00000377342 PRO0461Q9UI25 63 aa12.44□□□□□ -0.42
CBWD3-202ENST00000377342 H3BT86 120 aa12.42□□□□□ -0.42
CBWD3-202ENST00000377342 SMCPP49901 116 aaPredicted RBP12.42□□□□□ -0.42
CBWD3-202ENST00000377342 ANKRD29Q8N6D5 301 aa12.42□□□□□ -0.42
CBWD3-202ENST00000377342 A0A0G2JQZ4 141 aa12.41□□□□□ -0.42
CBWD3-202ENST00000377342 A0A1B0GV72 72 aa12.41□□□□□ -0.42
CBWD3-202ENST00000377342 SSBP3-AS1Q7Z2R9 100 aa12.41□□□□□ -0.42
CBWD3-202ENST00000377342 DMBT1Q9UGM3 2413 aaPredicted RBP12.41□□□□□ -0.42
CBWD3-202ENST00000377342 IGFL1Q6UW32 110 aa12.37□□□□□ -0.43
CBWD3-202ENST00000377342 Q6JHZ5 121 aa12.35□□□□□ -0.43
CBWD3-202ENST00000377342 LINC00304Q8N9R0 145 aa12.35□□□□□ -0.43
CBWD3-202ENST00000377342 J3QL48 77 aa12.33□□□□□ -0.44
CBWD3-202ENST00000377342 OBSCN-AS1Q96MR7 158 aa12.32□□□□□ -0.44
CBWD3-202ENST00000377342 RBM3P98179 157 aaKnown RBP12.3□□□□□ -0.44
CBWD3-202ENST00000377342 TRBV7-4A0A0J9YYF1 115 aa12.29□□□□□ -0.44
CBWD3-202ENST00000377342 F8W1H4 67 aa12.29□□□□□ -0.44
CBWD3-202ENST00000377342 JMJD7-PLA2G4BH0Y9G9 81 aa12.29□□□□□ -0.44
CBWD3-202ENST00000377342 HRCT1Q6UXD1 115 aa12.27□□□□□ -0.45
CBWD3-202ENST00000377342 C14orf132Q9NPU4 83 aa12.26□□□□□ -0.45
CBWD3-202ENST00000377342 A0A1W2PNM2 257 aa12.25□□□□□ -0.45
CBWD3-202ENST00000377342 CD164Q04900 197 aa12.25□□□□□ -0.45
CBWD3-202ENST00000377342 SPAG11AQ6PDA7 123 aa12.25□□□□□ -0.45
CBWD3-202ENST00000377342 DSCR8Q96T75 97 aa12.24□□□□□ -0.45
CBWD3-202ENST00000377342 SPINK1P00995 79 aa12.22□□□□□ -0.45
CBWD3-202ENST00000377342 C4orf48Q5BLP8 95 aa12.22□□□□□ -0.45
CBWD3-202ENST00000377342 LOC110117498A0A087WWA1 95 aa12.22□□□□□ -0.45
CBWD3-202ENST00000377342 Q6Q795 121 aa12.22□□□□□ -0.45
CBWD3-202ENST00000377342 Q6ZQT0 140 aa12.21□□□□□ -0.45
CBWD3-202ENST00000377342 TEN1Q86WV5 123 aa12.2□□□□□ -0.46
CBWD3-202ENST00000377342 TRBV7-7A0A0K0K1E9 115 aa12.19□□□□□ -0.46
CBWD3-202ENST00000377342 CCKP06307 115 aa12.19□□□□□ -0.46
CBWD3-202ENST00000377342 RPS29P62273 56 aaKnown RBP12.19□□□□□ -0.46
CBWD3-202ENST00000377342 ETDBQ3ZM63 59 aa12.19□□□□□ -0.46
CBWD3-202ENST00000377342 HERC1Q15751 4861 aa12.14□□□□□ -0.47
CBWD3-202ENST00000377342 PDE6GP18545 87 aa12.14□□□□□ -0.47
CBWD3-202ENST00000377342 VPS25Q9BRG1 176 aa12.14□□□□□ -0.47
CBWD3-202ENST00000377342 A0A087WSZ3 146 aa12.12□□□□□ -0.47
CBWD3-202ENST00000377342 Q5XG85 94 aa12.12□□□□□ -0.47
CBWD3-202ENST00000377342 LIMD2Q9BT23 127 aa12.11□□□□□ -0.47
CBWD3-202ENST00000377342 RETNLBQ9BQ08 111 aa12.08□□□□□ -0.48
CBWD3-202ENST00000377342 C21orf62-AS1Q17RA5 79 aa12.04□□□□□ -0.48
CBWD3-202ENST00000377342 ASB16-AS1Q495Z4 193 aa12.03□□□□□ -0.48
CBWD3-202ENST00000377342 SS18L2Q9UHA2 77 aa12.03□□□□□ -0.48
CBWD3-202ENST00000377342 A0A1B0GW54 56 aa12□□□□□ -0.49
CBWD3-202ENST00000377342 C1orf195Q5TG92 126 aa12□□□□□ -0.49
CBWD3-202ENST00000377342 Q96NJ1 140 aa12□□□□□ -0.49
CBWD3-202ENST00000377342 LINC00472Q9H8W2 130 aa11.93□□□□□ -0.5
CBWD3-202ENST00000377342 PRR4Q16378 134 aa11.91□□□□□ -0.5
CBWD3-202ENST00000377342 LCE2DQ5TA82 110 aaPredicted RBP11.91□□□□□ -0.5
CBWD3-202ENST00000377342 FP248Q71RG6 208 aaPredicted RBP11.91□□□□□ -0.5
CBWD3-202ENST00000377342 HMCN2Q8NDA2 5059 aa11.91□□□□□ -0.5
CBWD3-202ENST00000377342 LINC00846Q9NV44 126 aa11.91□□□□□ -0.5
CBWD3-202ENST00000377342 DEFB116Q30KQ4 102 aa11.88□□□□□ -0.51
CBWD3-202ENST00000377342 IGLV7-46A0A075B6I9 117 aa11.87□□□□□ -0.51
CBWD3-202ENST00000377342 Q6ZVQ6 151 aa11.86□□□□□ -0.51
CBWD3-202ENST00000377342 NREPQ16612 68 aa11.85□□□□□ -0.51
CBWD3-202ENST00000377342 FAM240AA0A1B0GVK7 77 aa11.84□□□□□ -0.51
CBWD3-202ENST00000377342 IGKV4-1P06312 121 aa11.83□□□□□ -0.52
CBWD3-202ENST00000377342 SIGMAR1Q99720 223 aa11.82□□□□□ -0.52
CBWD3-202ENST00000377342 LPAP08519 4548 aa11.81□□□□□ -0.52
CBWD3-202ENST00000377342 ACYP1P07311 99 aa11.79□□□□□ -0.52
CBWD3-202ENST00000377342 UBL5Q9BZL1 73 aa11.79□□□□□ -0.52
CBWD3-202ENST00000377342 KRTAP13-3Q3SY46 172 aa11.78□□□□□ -0.52
CBWD3-202ENST00000377342 J3KT08 172 aa11.77□□□□□ -0.53
CBWD3-202ENST00000377342 TPRXLQ17RH7 258 aa11.77□□□□□ -0.53
CBWD3-202ENST00000377342 J3QR89 54 aa11.74□□□□□ -0.53
CBWD3-202ENST00000377342 DSCR10P59022 87 aa11.73□□□□□ -0.53
CBWD3-202ENST00000377342 BPY2O14599 106 aa11.71□□□□□ -0.53
CBWD3-202ENST00000377342 LRP2P98164 4655 aa11.7□□□□□ -0.54
CBWD3-202ENST00000377342 C9orf92A6NGG3 77 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 1190.3 ms