RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 CEND1Q8N111 149 aa12.4□□□□□ -0.42
SRM-201ENST00000376957 C2orf91Q6ZV80 131 aa12.39□□□□□ -0.43
SRM-201ENST00000376957 PPDPFLQ8WWR9 84 aa12.39□□□□□ -0.43
SRM-201ENST00000376957 TMA7Q9Y2S6 64 aaKnown RBP12.39□□□□□ -0.43
SRM-201ENST00000376957 H0YGX0 51 aa12.38□□□□□ -0.43
SRM-201ENST00000376957 GHRHP01286 108 aa12.35□□□□□ -0.43
SRM-201ENST00000376957 OCIAD2Q56VL3 154 aa12.35□□□□□ -0.43
SRM-201ENST00000376957 PYY3Q5JQD4 70 aa12.35□□□□□ -0.43
SRM-201ENST00000376957 Q6JHZ5 121 aa12.35□□□□□ -0.43
SRM-201ENST00000376957 SNHG12Q9BXW3 62 aa12.35□□□□□ -0.43
SRM-201ENST00000376957 PRO1854Q9UHT4 67 aa12.35□□□□□ -0.43
SRM-201ENST00000376957 Q5XG85 94 aa12.34□□□□□ -0.43
SRM-201ENST00000376957 TCL1BO95988 128 aa12.33□□□□□ -0.44
SRM-201ENST00000376957 SEC61BP60468 96 aaKnown RBP12.31□□□□□ -0.44
SRM-201ENST00000376957 HSD52Q0P140 79 aa12.29□□□□□ -0.44
SRM-201ENST00000376957 CLEC2BQ92478 149 aa12.28□□□□□ -0.44
SRM-201ENST00000376957 UQCR10Q9UDW1 63 aa12.27□□□□□ -0.45
SRM-201ENST00000376957 IGLV8-61A0A075B6I0 122 aa12.26□□□□□ -0.45
SRM-201ENST00000376957 A0A1B0GX51 115 aa12.26□□□□□ -0.45
SRM-201ENST00000376957 A0A0G2JQZ4 141 aa12.25□□□□□ -0.45
SRM-201ENST00000376957 FXYD2P54710 66 aa12.25□□□□□ -0.45
SRM-201ENST00000376957 ASB16-AS1Q495Z4 193 aa12.25□□□□□ -0.45
SRM-201ENST00000376957 COX6CP09669 75 aa12.21□□□□□ -0.45
SRM-201ENST00000376957 PSMB2P49721 201 aa12.21□□□□□ -0.45
SRM-201ENST00000376957 XP32Q5T750 250 aa12.21□□□□□ -0.45
SRM-201ENST00000376957 IGFL1Q6UW32 110 aa12.21□□□□□ -0.45
SRM-201ENST00000376957 C1orf195Q5TG92 126 aa12.2□□□□□ -0.46
SRM-201ENST00000376957 TRBV7-7A0A0K0K1E9 115 aa12.18□□□□□ -0.46
SRM-201ENST00000376957 DNAL4O96015 105 aa12.18□□□□□ -0.46
SRM-201ENST00000376957 MUC2Q02817 5179 aa12.18□□□□□ -0.46
SRM-201ENST00000376957 NDUFV3P56181 108 aaKnown RBP12.17□□□□□ -0.46
SRM-201ENST00000376957 FAM218AQ96MZ4 157 aa12.17□□□□□ -0.46
SRM-201ENST00000376957 C9orf92A6NGG3 77 aa12.16□□□□□ -0.46
SRM-201ENST00000376957 H3BQ85 93 aa12.16□□□□□ -0.46
SRM-201ENST00000376957 TRIAP1O43715 76 aa12.16□□□□□ -0.46
SRM-201ENST00000376957 FABP2P12104 132 aa12.15□□□□□ -0.46
SRM-201ENST00000376957 H3BUT2 72 aa12.14□□□□□ -0.47
SRM-201ENST00000376957 SS18L2Q9UHA2 77 aa12.11□□□□□ -0.47
SRM-201ENST00000376957 H3BMG7 143 aa12.1□□□□□ -0.47
SRM-201ENST00000376957 K7ERJ3 54 aa12.1□□□□□ -0.47
SRM-201ENST00000376957 ORMDL1Q9P0S3 153 aa12.1□□□□□ -0.47
SRM-201ENST00000376957 Q6Q795 121 aa12.08□□□□□ -0.48
SRM-201ENST00000376957 TEN1Q86WV5 123 aa12.08□□□□□ -0.48
SRM-201ENST00000376957 LST1O00453 97 aa12.07□□□□□ -0.48
SRM-201ENST00000376957 TMEM256-PLSCR3K7ERE1 68 aa12.06□□□□□ -0.48
SRM-201ENST00000376957 SCGB1C2P0DMR2 95 aa12.05□□□□□ -0.48
SRM-201ENST00000376957 MUC17Q685J3 4493 aa12.01□□□□□ -0.49
SRM-201ENST00000376957 M0R143 59 aa12.01□□□□□ -0.49
SRM-201ENST00000376957 SMIM6P0DI80 62 aa11.99□□□□□ -0.49
SRM-201ENST00000376957 PCOTHQ58A44 107 aa11.99□□□□□ -0.49
SRM-201ENST00000376957 ANKRD29Q8N6D5 301 aa11.99□□□□□ -0.49
SRM-201ENST00000376957 TRACP01848 142 aa11.97□□□□□ -0.49
SRM-201ENST00000376957 A0A087WSZ3 146 aa11.95□□□□□ -0.5
SRM-201ENST00000376957 RPL37P61927 97 aaKnown RBP11.93□□□□□ -0.5
SRM-201ENST00000376957 UBE2V1Q13404 147 aa11.93□□□□□ -0.5
SRM-201ENST00000376957 KRTAP4-1Q9BYQ7 146 aa11.91□□□□□ -0.5
SRM-201ENST00000376957 TRBV7-4A0A0J9YYF1 115 aa11.9□□□□□ -0.5
SRM-201ENST00000376957 TSTD3H0UI37 97 aa11.89□□□□□ -0.51
SRM-201ENST00000376957 OBSCN-AS1Q96MR7 158 aa11.89□□□□□ -0.51
SRM-201ENST00000376957 A0A1B0GV72 72 aa11.88□□□□□ -0.51
SRM-201ENST00000376957 LCE2AQ5TA79 106 aaPredicted RBP11.88□□□□□ -0.51
SRM-201ENST00000376957 A0A1W2PNM2 257 aa11.86□□□□□ -0.51
SRM-201ENST00000376957 CCKP06307 115 aa11.85□□□□□ -0.51
SRM-201ENST00000376957 RBM3P98179 157 aaKnown RBP11.85□□□□□ -0.51
SRM-201ENST00000376957 DSCR8Q96T75 97 aa11.85□□□□□ -0.51
SRM-201ENST00000376957 FAT4Q6V0I7 4981 aa11.84□□□□□ -0.51
SRM-201ENST00000376957 ATP11AUNQ6ZP68 121 aa11.84□□□□□ -0.51
SRM-201ENST00000376957 ATXN8Q156A1 80 aa11.83□□□□□ -0.52
SRM-201ENST00000376957 BAALC-AS2P0C853 105 aa11.82□□□□□ -0.52
SRM-201ENST00000376957 Q96NJ1 140 aa11.82□□□□□ -0.52
SRM-201ENST00000376957 LYRM7Q5U5X0 104 aa11.81□□□□□ -0.52
SRM-201ENST00000376957 C21orf62-AS1Q17RA5 79 aa11.8□□□□□ -0.52
SRM-201ENST00000376957 Q75L30 129 aa11.8□□□□□ -0.52
SRM-201ENST00000376957 SIGMAR1Q99720 223 aa11.8□□□□□ -0.52
SRM-201ENST00000376957 VPS25Q9BRG1 176 aa11.78□□□□□ -0.52
SRM-201ENST00000376957 C9JAW5 83 aa11.76□□□□□ -0.53
SRM-201ENST00000376957 IGKV4-1P06312 121 aa11.76□□□□□ -0.53
SRM-201ENST00000376957 JMJD7-PLA2G4BH0Y9G9 81 aa11.74□□□□□ -0.53
SRM-201ENST00000376957 BATFQ16520 125 aa11.73□□□□□ -0.53
SRM-201ENST00000376957 TRBV20-1A0A075B6N2 111 aa11.72□□□□□ -0.53
SRM-201ENST00000376957 NAA38Q9BRA0 125 aaKnown RBP11.72□□□□□ -0.53
SRM-201ENST00000376957 LINC00313P59037 77 aa11.7□□□□□ -0.54
SRM-201ENST00000376957 LOC105371267A0A1B0GV96 52 aa11.68□□□□□ -0.54
SRM-201ENST00000376957 C20orf166-AS1Q96NR2 134 aa11.68□□□□□ -0.54
SRM-201ENST00000376957 PDE6GP18545 87 aa11.67□□□□□ -0.54
SRM-201ENST00000376957 LINC00472Q9H8W2 130 aa11.67□□□□□ -0.54
SRM-201ENST00000376957 DSCR10P59022 87 aa11.66□□□□□ -0.54
SRM-201ENST00000376957 COX6B2Q6YFQ2 88 aa11.66□□□□□ -0.54
SRM-201ENST00000376957 A0A1B0GW54 56 aa11.64□□□□□ -0.55
SRM-201ENST00000376957 A8MUU9 505 aa11.64□□□□□ -0.55
SRM-201ENST00000376957 DEFB116Q30KQ4 102 aa11.64□□□□□ -0.55
SRM-201ENST00000376957 J3KT08 172 aa11.63□□□□□ -0.55
SRM-201ENST00000376957 IGHV6-1A0A0B4J1U7 121 aa11.6□□□□□ -0.55
SRM-201ENST00000376957 LOC110117498A0A087WWA1 95 aa11.59□□□□□ -0.55
SRM-201ENST00000376957 LCE2CQ5TA81 110 aa11.59□□□□□ -0.55
SRM-201ENST00000376957 Q6ZQT0 140 aa11.59□□□□□ -0.55
SRM-201ENST00000376957 KRTAP9-2Q9BYQ4 174 aa11.59□□□□□ -0.55
SRM-201ENST00000376957 C9orf118A6NHY6 69 aa11.58□□□□□ -0.56
SRM-201ENST00000376957 C8orf87E5RJ46 101 aa11.57□□□□□ -0.56
SRM-201ENST00000376957 KRTAP19-2Q3LHN2 52 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 220.3 ms