RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 SZT2Q5T011 3432 aa7.34□□□□□ -1.23
PTCH1-203ENST00000375274 WIPF1O43516 503 aa7.32□□□□□ -1.24
PTCH1-203ENST00000375274 PSORS1C2Q9UIG4 136 aa7.32□□□□□ -1.24
PTCH1-203ENST00000375274 IGSF10Q6WRI0 2623 aa7.32□□□□□ -1.24
PTCH1-203ENST00000375274 ATMQ13315 3056 aa7.31□□□□□ -1.24
PTCH1-203ENST00000375274 DMXL2Q8TDJ6 3036 aa7.31□□□□□ -1.24
PTCH1-203ENST00000375274 BOD1L1Q8NFC6 3051 aa7.31□□□□□ -1.24
PTCH1-203ENST00000375274 FRYLO94915 3013 aa7.31□□□□□ -1.24
PTCH1-203ENST00000375274 FLNCQ14315 2725 aa7.31□□□□□ -1.24
PTCH1-203ENST00000375274 CD164Q04900 197 aa7.3□□□□□ -1.24
PTCH1-203ENST00000375274 Q1T7F1 81 aa7.3□□□□□ -1.24
PTCH1-203ENST00000375274 Q5XG85 94 aa7.29□□□□□ -1.24
PTCH1-203ENST00000375274 TACC2O95359 2948 aa7.29□□□□□ -1.24
PTCH1-203ENST00000375274 MIR22HGQ0VDD5 57 aa7.29□□□□□ -1.24
PTCH1-203ENST00000375274 KTN1-AS1Q86SY8 53 aa7.28□□□□□ -1.24
PTCH1-203ENST00000375274 ITPR1Q14643 2758 aa7.28□□□□□ -1.24
PTCH1-203ENST00000375274 APLNQ9ULZ1 77 aa7.28□□□□□ -1.24
PTCH1-203ENST00000375274 IGLV7-43P04211 117 aa7.27□□□□□ -1.25
PTCH1-203ENST00000375274 FP248Q71RG6 208 aaPredicted RBP7.27□□□□□ -1.25
PTCH1-203ENST00000375274 SPRR1AP35321 89 aa7.26□□□□□ -1.25
PTCH1-203ENST00000375274 PRR26Q8N8Z3 221 aa7.25□□□□□ -1.25
PTCH1-203ENST00000375274 CDC42SE1Q9NRR8 79 aa7.24□□□□□ -1.25
PTCH1-203ENST00000375274 WWC2-AS2Q96NR7 200 aa7.24□□□□□ -1.25
PTCH1-203ENST00000375274 COL12A1Q99715 3063 aa7.24□□□□□ -1.25
PTCH1-203ENST00000375274 ASH1LQ9NR48 2969 aaKnown RBP7.24□□□□□ -1.25
PTCH1-203ENST00000375274 NSD1Q96L73 2696 aaPredicted RBP7.23□□□□□ -1.25
PTCH1-203ENST00000375274 FAM229BQ4G0N7 80 aa7.23□□□□□ -1.25
PTCH1-203ENST00000375274 IGLV7-46A0A075B6I9 117 aa7.22□□□□□ -1.25
PTCH1-203ENST00000375274 LINC00304Q8N9R0 145 aa7.21□□□□□ -1.26
PTCH1-203ENST00000375274 STAB2Q8WWQ8 2551 aa7.19□□□□□ -1.26
PTCH1-203ENST00000375274 LCA10Q71F78 164 aa7.19□□□□□ -1.26
PTCH1-203ENST00000375274 OXTP01178 125 aa7.19□□□□□ -1.26
PTCH1-203ENST00000375274 CFAP47Q6ZTR5 3102 aa7.19□□□□□ -1.26
PTCH1-203ENST00000375274 LRBAP50851 2863 aa7.18□□□□□ -1.26
PTCH1-203ENST00000375274 Q8N9P0 234 aaPredicted RBP7.18□□□□□ -1.26
PTCH1-203ENST00000375274 MMP24-AS1A0A0U1RRL7 71 aa7.17□□□□□ -1.26
PTCH1-203ENST00000375274 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.16□□□□□ -1.26
PTCH1-203ENST00000375274 BAHCC1Q9P281 2608 aa7.16□□□□□ -1.26
PTCH1-203ENST00000375274 KRTAP26-1Q6PEX3 210 aa7.15□□□□□ -1.26
PTCH1-203ENST00000375274 C9orf92A6NGG3 77 aa7.15□□□□□ -1.26
PTCH1-203ENST00000375274 COL6A3P12111 3177 aa7.15□□□□□ -1.27
PTCH1-203ENST00000375274 Q8N1X5 172 aa7.14□□□□□ -1.27
PTCH1-203ENST00000375274 ZZEF1O43149 2961 aa7.14□□□□□ -1.27
PTCH1-203ENST00000375274 SPINT4Q6UDR6 99 aa7.13□□□□□ -1.27
PTCH1-203ENST00000375274 SPEGQ15772 3267 aa7.13□□□□□ -1.27
PTCH1-203ENST00000375274 Q75L30 129 aa7.13□□□□□ -1.27
PTCH1-203ENST00000375274 LINC00472Q9H8W2 130 aa7.13□□□□□ -1.27
PTCH1-203ENST00000375274 SPRR1BP22528 89 aa7.12□□□□□ -1.27
PTCH1-203ENST00000375274 FLG2Q5D862 2391 aaPredicted RBP7.12□□□□□ -1.27
PTCH1-203ENST00000375274 SMR3BP02814 79 aaPredicted RBP7.11□□□□□ -1.27
PTCH1-203ENST00000375274 HRES1P13985 223 aa7.11□□□□□ -1.27
PTCH1-203ENST00000375274 TNP2Q05952 138 aa7.1□□□□□ -1.27
PTCH1-203ENST00000375274 LINC01558Q9Y6Z2 57 aa7.1□□□□□ -1.27
PTCH1-203ENST00000375274 UTP20O75691 2785 aaKnown RBP7.08□□□□□ -1.28
PTCH1-203ENST00000375274 Q5VV11 94 aa7.08□□□□□ -1.28
PTCH1-203ENST00000375274 REV3LO60673 3130 aa7.07□□□□□ -1.28
PTCH1-203ENST00000375274 ITPR2Q14571 2701 aa7.06□□□□□ -1.28
PTCH1-203ENST00000375274 KRTAP1-5Q9BYS1 174 aa7.06□□□□□ -1.28
PTCH1-203ENST00000375274 ZANQ9Y493 2812 aa7.05□□□□□ -1.28
PTCH1-203ENST00000375274 CELSR2Q9HCU4 2923 aa7.05□□□□□ -1.28
PTCH1-203ENST00000375274 CRIPTQ9P021 101 aa7.05□□□□□ -1.28
PTCH1-203ENST00000375274 KRTAP4-16G5E9R7 235 aaPredicted RBP7.04□□□□□ -1.28
PTCH1-203ENST00000375274 DMBT1Q9UGM3 2413 aaPredicted RBP7.04□□□□□ -1.28
PTCH1-203ENST00000375274 EYSQ5T1H1 3165 aa7.03□□□□□ -1.28
PTCH1-203ENST00000375274 RBM12B-AS1Q9P1G2 102 aa7.03□□□□□ -1.28
PTCH1-203ENST00000375274 PLAC8Q9NZF1 115 aa7.03□□□□□ -1.28
PTCH1-203ENST00000375274 NIPBLQ6KC79 2804 aaeCLIP7.03□□□□□ -1.28
PTCH1-203ENST00000375274 APCP25054 2843 aa7.02□□□□□ -1.29
PTCH1-203ENST00000375274 HIVEP1P15822 2718 aa7□□□□□ -1.29
PTCH1-203ENST00000375274 SPTBN5Q9NRC6 3674 aaKnown RBP7□□□□□ -1.29
PTCH1-203ENST00000375274 A0A0D9SG42 100 aa6.98□□□□□ -1.29
PTCH1-203ENST00000375274 SPINK7P58062 85 aa6.98□□□□□ -1.29
PTCH1-203ENST00000375274 Q5W150 140 aa6.98□□□□□ -1.29
PTCH1-203ENST00000375274 A0A1B0GU33 70 aa6.96□□□□□ -1.29
PTCH1-203ENST00000375274 KRTAP21-3Q3LHN1 58 aa6.96□□□□□ -1.29
PTCH1-203ENST00000375274 KRTAP29-1A8MX34 341 aaPredicted RBP6.96□□□□□ -1.3
PTCH1-203ENST00000375274 ZCCHC13Q8WW36 166 aaKnown RBP6.96□□□□□ -1.3
PTCH1-203ENST00000375274 J3QL48 77 aa6.94□□□□□ -1.3
PTCH1-203ENST00000375274 LOC400499M0QZD8 3231 aa6.93□□□□□ -1.3
PTCH1-203ENST00000375274 PRAC1Q96KF2 57 aa6.93□□□□□ -1.3
PTCH1-203ENST00000375274 DCHS2Q6V1P9 2916 aa6.92□□□□□ -1.3
PTCH1-203ENST00000375274 LINC01554Q52M75 96 aa6.91□□□□□ -1.3
PTCH1-203ENST00000375274 NF1P21359 2839 aa6.91□□□□□ -1.3
PTCH1-203ENST00000375274 KMT2BQ9UMN6 2715 aaPredicted RBP6.89□□□□□ -1.31
PTCH1-203ENST00000375274 Q6ZR54 194 aa6.89□□□□□ -1.31
PTCH1-203ENST00000375274 PANO1I0J062 215 aa6.88□□□□□ -1.31
PTCH1-203ENST00000375274 DMXL1Q9Y485 3027 aa6.88□□□□□ -1.31
PTCH1-203ENST00000375274 LINC00483Q53H64 154 aa6.87□□□□□ -1.31
PTCH1-203ENST00000375274 FBN2P35556 2912 aa6.87□□□□□ -1.31
PTCH1-203ENST00000375274 COX6B2Q6YFQ2 88 aa6.86□□□□□ -1.31
PTCH1-203ENST00000375274 DMAC1Q96GE9 116 aa6.86□□□□□ -1.31
PTCH1-203ENST00000375274 HRNRQ86YZ3 2850 aaPredicted RBP6.84□□□□□ -1.31
PTCH1-203ENST00000375274 LCE6AA0A183 80 aa6.83□□□□□ -1.32
PTCH1-203ENST00000375274 KRTAP7-1Q8IUC3 87 aa6.82□□□□□ -1.32
PTCH1-203ENST00000375274 CSAG1Q6PB30 78 aa6.81□□□□□ -1.32
PTCH1-203ENST00000375274 USP34Q70CQ2 3546 aa6.8□□□□□ -1.32
PTCH1-203ENST00000375274 KRTAP11-1Q8IUC1 163 aa6.79□□□□□ -1.32
PTCH1-203ENST00000375274 A0A087X002 238 aa6.79□□□□□ -1.32
PTCH1-203ENST00000375274 NOTCH2NLQ7Z3S9 236 aa6.79□□□□□ -1.32
PTCH1-203ENST00000375274 MYO15AQ9UKN7 3530 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms