RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 Q6ZR54 194 aa6.83□□□□□ -1.32
VCL-202ENST00000372755 OXTP01178 125 aa6.81□□□□□ -1.32
VCL-202ENST00000372755 KRTAP10-2P60368 255 aa6.81□□□□□ -1.32
VCL-202ENST00000372755 ASB16-AS1Q495Z4 193 aa6.81□□□□□ -1.32
VCL-202ENST00000372755 ADM2Q7Z4H4 148 aa6.81□□□□□ -1.32
VCL-202ENST00000372755 EPG5Q9HCE0 2579 aa6.8□□□□□ -1.32
VCL-202ENST00000372755 USP24Q9UPU5 2620 aa6.79□□□□□ -1.32
VCL-202ENST00000372755 HECTD1Q9ULT8 2610 aa6.79□□□□□ -1.32
VCL-202ENST00000372755 CENPFP49454 3210 aa6.76□□□□□ -1.33
VCL-202ENST00000372755 SPATA8Q6RVD6 105 aa6.75□□□□□ -1.33
VCL-202ENST00000372755 KRTAP29-1A8MX34 341 aaPredicted RBP6.74□□□□□ -1.33
VCL-202ENST00000372755 KRTAP4-16G5E9R7 235 aaPredicted RBP6.74□□□□□ -1.33
VCL-202ENST00000372755 PANO1I0J062 215 aa6.73□□□□□ -1.33
VCL-202ENST00000372755 SRCAPQ6ZRS2 3230 aa6.72□□□□□ -1.33
VCL-202ENST00000372755 FLNBO75369 2602 aaKnown RBP6.71□□□□□ -1.33
VCL-202ENST00000372755 RPS29P62273 56 aaKnown RBP6.67□□□□□ -1.34
VCL-202ENST00000372755 A0A087X002 238 aa6.67□□□□□ -1.34
VCL-202ENST00000372755 FLNAP21333 2647 aaKnown RBP6.66□□□□□ -1.34
VCL-202ENST00000372755 ITPR3Q14573 2671 aa6.6□□□□□ -1.35
VCL-202ENST00000372755 NOTCH2NLQ7Z3S9 236 aa6.59□□□□□ -1.35
VCL-202ENST00000372755 A8MUU9 505 aa6.59□□□□□ -1.36
VCL-202ENST00000372755 ATRQ13535 2644 aa6.58□□□□□ -1.36
VCL-202ENST00000372755 KRTAP25-1Q3LHN0 102 aa6.57□□□□□ -1.36
VCL-202ENST00000372755 KRTAP16-1A8MUX0 517 aa6.57□□□□□ -1.36
VCL-202ENST00000372755 BPTFQ12830 3046 aa6.56□□□□□ -1.36
VCL-202ENST00000372755 C20orf166-AS1Q96NR2 134 aa6.55□□□□□ -1.36
VCL-202ENST00000372755 MAST4O15021 2626 aa6.55□□□□□ -1.36
VCL-202ENST00000372755 A8MU10 97 aa6.53□□□□□ -1.36
VCL-202ENST00000372755 HELZ2Q9BYK8 2649 aaKnown RBP6.52□□□□□ -1.37
VCL-202ENST00000372755 A6NN06 94 aa6.52□□□□□ -1.37
VCL-202ENST00000372755 Q6ZRN7 208 aaPredicted RBP6.5□□□□□ -1.37
VCL-202ENST00000372755 FLG2Q5D862 2391 aaPredicted RBP6.5□□□□□ -1.37
VCL-202ENST00000372755 KRTAP11-1Q8IUC1 163 aa6.5□□□□□ -1.37
VCL-202ENST00000372755 STAB1Q9NY15 2570 aa6.5□□□□□ -1.37
VCL-202ENST00000372755 KRTAP13-2Q52LG2 175 aa6.46□□□□□ -1.37
VCL-202ENST00000372755 TNP1P09430 55 aa6.44□□□□□ -1.38
VCL-202ENST00000372755 KRTAP13-1Q8IUC0 172 aa6.43□□□□□ -1.38
VCL-202ENST00000372755 KRTAP7-1Q8IUC3 87 aa6.43□□□□□ -1.38
VCL-202ENST00000372755 PRRC2CQ9Y520 2896 aaKnown RBP6.41□□□□□ -1.38
VCL-202ENST00000372755 DMBT1Q9UGM3 2413 aaPredicted RBP6.4□□□□□ -1.38
VCL-202ENST00000372755 NBEAL1Q6ZS30 2694 aa6.4□□□□□ -1.38
VCL-202ENST00000372755 NDUFAF8A1L188 74 aa6.37□□□□□ -1.39
VCL-202ENST00000372755 CFAP46Q8IYW2 2715 aa6.36□□□□□ -1.39
VCL-202ENST00000372755 C10orf95Q9H7T3 257 aa6.33□□□□□ -1.4
VCL-202ENST00000372755 CHD9Q3L8U1 2897 aa6.31□□□□□ -1.4
VCL-202ENST00000372755 PP632Q6XCG6 107 aa6.29□□□□□ -1.4
VCL-202ENST00000372755 CHD7Q9P2D1 2997 aa6.25□□□□□ -1.41
VCL-202ENST00000372755 CHD6Q8TD26 2715 aa6.25□□□□□ -1.41
VCL-202ENST00000372755 TEX15Q9BXT5 2789 aa6.24□□□□□ -1.41
VCL-202ENST00000372755 TEP1Q99973 2627 aaKnown RBP6.22□□□□□ -1.41
VCL-202ENST00000372755 KRTAP21-3Q3LHN1 58 aa6.22□□□□□ -1.41
VCL-202ENST00000372755 AKAP13Q12802 2813 aa6.22□□□□□ -1.41
VCL-202ENST00000372755 GOLGB1Q14789 3259 aaKnown RBP6.22□□□□□ -1.41
VCL-202ENST00000372755 DNAH12Q6ZR08 3092 aa6.21□□□□□ -1.41
VCL-202ENST00000372755 TRANK1O15050 2925 aa6.21□□□□□ -1.42
VCL-202ENST00000372755 UNC79Q9P2D8 2635 aa6.2□□□□□ -1.42
VCL-202ENST00000372755 KRTAP10-8P60410 259 aa6.19□□□□□ -1.42
VCL-202ENST00000372755 STAB2Q8WWQ8 2551 aa6.19□□□□□ -1.42
VCL-202ENST00000372755 ZNF292O60281 2723 aa6.19□□□□□ -1.42
VCL-202ENST00000372755 CENPEQ02224 2701 aa6.19□□□□□ -1.42
VCL-202ENST00000372755 GCN1Q92616 2671 aaKnown RBP6.18□□□□□ -1.42
VCL-202ENST00000372755 COL6A5A8TX70 2615 aa6.17□□□□□ -1.42
VCL-202ENST00000372755 XP32Q5T750 250 aa6.16□□□□□ -1.42
VCL-202ENST00000372755 CEP350Q5VT06 3117 aa6.15□□□□□ -1.43
VCL-202ENST00000372755 NOTCH1P46531 2555 aa6.13□□□□□ -1.43
VCL-202ENST00000372755 SETXQ7Z333 2677 aaKnown RBP6.1□□□□□ -1.43
VCL-202ENST00000372755 KRTAP1-4P0C5Y4 121 aa6.1□□□□□ -1.43
VCL-202ENST00000372755 A0A1B0GVY2 172 aa6.1□□□□□ -1.43
VCL-202ENST00000372755 TPRXLQ17RH7 258 aa6.06□□□□□ -1.44
VCL-202ENST00000372755 HTTP42858 3142 aa6.06□□□□□ -1.44
VCL-202ENST00000372755 P0C880 135 aa6.06□□□□□ -1.44
VCL-202ENST00000372755 C5orf42Q9H799 3197 aa6.05□□□□□ -1.44
VCL-202ENST00000372755 PRO2289Q9P1D8 64 aa6.05□□□□□ -1.44
VCL-202ENST00000372755 H0YAA0 97 aa6.04□□□□□ -1.44
VCL-202ENST00000372755 NSD1Q96L73 2696 aaPredicted RBP6.02□□□□□ -1.45
VCL-202ENST00000372755 KRTAP10-10P60014 251 aa6.02□□□□□ -1.45
VCL-202ENST00000372755 NBEAL2Q6ZNJ1 2754 aa6.02□□□□□ -1.45
VCL-202ENST00000372755 UTRNP46939 3433 aa6.01□□□□□ -1.45
VCL-202ENST00000372755 MAP1AP78559 2803 aaPredicted RBP5.97□□□□□ -1.45
VCL-202ENST00000372755 BAHCC1Q9P281 2608 aa5.96□□□□□ -1.46
VCL-202ENST00000372755 PCNTO95613 3336 aa5.93□□□□□ -1.46
VCL-202ENST00000372755 MGAQ8IWI9 3026 aa5.92□□□□□ -1.46
VCL-202ENST00000372755 KRTAP13-3Q3SY46 172 aa5.92□□□□□ -1.46
VCL-202ENST00000372755 ITPR2Q14571 2701 aa5.92□□□□□ -1.46
VCL-202ENST00000372755 UBR5O95071 2799 aaPredicted RBP5.91□□□□□ -1.46
VCL-202ENST00000372755 IGSF10Q6WRI0 2623 aa5.91□□□□□ -1.46
VCL-202ENST00000372755 KMT2BQ9UMN6 2715 aaPredicted RBP5.9□□□□□ -1.47
VCL-202ENST00000372755 RANBP2P49792 3224 aaKnown RBP5.86□□□□□ -1.47
VCL-202ENST00000372755 A0A0C4DFX4 3053 aa5.85□□□□□ -1.47
VCL-202ENST00000372755 CFAP54Q96N23 3096 aa5.81□□□□□ -1.48
VCL-202ENST00000372755 ITPR1Q14643 2758 aa5.76□□□□□ -1.49
VCL-202ENST00000372755 DSPP15924 2871 aaKnown RBP5.75□□□□□ -1.49
VCL-202ENST00000372755 FRYQ5TBA9 3013 aa5.74□□□□□ -1.49
VCL-202ENST00000372755 FLNCQ14315 2725 aa5.73□□□□□ -1.49
VCL-202ENST00000372755 APCP25054 2843 aa5.73□□□□□ -1.49
VCL-202ENST00000372755 KRTAP12-2P59991 146 aa5.69□□□□□ -1.5
VCL-202ENST00000372755 KRTAP13-4Q3LI77 160 aa5.69□□□□□ -1.5
VCL-202ENST00000372755 UTP20O75691 2785 aaKnown RBP5.66□□□□□ -1.5
VCL-202ENST00000372755 NIPBLQ6KC79 2804 aaeCLIP5.64□□□□□ -1.516e-6■■■□□ 16.7
VCL-202ENST00000372755 TENM4Q6N022 2769 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 286.2 ms