RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 ZFHX4Q86UP3 3567 aa6.65□□□□□ -1.34
NUP188-201ENST00000372577 CHD6Q8TD26 2715 aa6.65□□□□□ -1.34
NUP188-201ENST00000372577 SMG1Q96Q15 3661 aaKnown RBP6.65□□□□□ -1.35
NUP188-201ENST00000372577 FLNBO75369 2602 aaKnown RBP6.63□□□□□ -1.35
NUP188-201ENST00000372577 MGAQ8IWI9 3026 aa6.63□□□□□ -1.35
NUP188-201ENST00000372577 SPRR1AP35321 89 aa6.63□□□□□ -1.35
NUP188-201ENST00000372577 A0A0G2JQZ4 141 aa6.62□□□□□ -1.35
NUP188-201ENST00000372577 IGLV8-61A0A075B6I0 122 aa6.61□□□□□ -1.35
NUP188-201ENST00000372577 HELZ2Q9BYK8 2649 aaKnown RBP6.61□□□□□ -1.35
NUP188-201ENST00000372577 ATMQ13315 3056 aa6.61□□□□□ -1.35
NUP188-201ENST00000372577 KALRNO60229 2985 aa6.6□□□□□ -1.35
NUP188-201ENST00000372577 OCR1Q9BZK8 76 aa6.59□□□□□ -1.35
NUP188-201ENST00000372577 UQCR11O14957 56 aa6.59□□□□□ -1.36
NUP188-201ENST00000372577 A8MUN3 132 aa6.58□□□□□ -1.36
NUP188-201ENST00000372577 ANAPC11Q9NYG5 84 aa6.58□□□□□ -1.36
NUP188-201ENST00000372577 FAM229BQ4G0N7 80 aa6.57□□□□□ -1.36
NUP188-201ENST00000372577 PLAC8Q9NZF1 115 aa6.56□□□□□ -1.36
NUP188-201ENST00000372577 AKAP13Q12802 2813 aa6.56□□□□□ -1.36
NUP188-201ENST00000372577 SPRR1BP22528 89 aa6.56□□□□□ -1.36
NUP188-201ENST00000372577 TNP2Q05952 138 aa6.55□□□□□ -1.36
NUP188-201ENST00000372577 ATRQ13535 2644 aa6.55□□□□□ -1.36
NUP188-201ENST00000372577 KTN1-AS1Q86SY8 53 aa6.55□□□□□ -1.36
NUP188-201ENST00000372577 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.54□□□□□ -1.36
NUP188-201ENST00000372577 Q8NDZ9 215 aa6.54□□□□□ -1.36
NUP188-201ENST00000372577 CRIPTQ9P021 101 aa6.54□□□□□ -1.36
NUP188-201ENST00000372577 CFAP46Q8IYW2 2715 aa6.54□□□□□ -1.36
NUP188-201ENST00000372577 KRTAP26-1Q6PEX3 210 aa6.54□□□□□ -1.36
NUP188-201ENST00000372577 LCA10Q71F78 164 aa6.54□□□□□ -1.36
NUP188-201ENST00000372577 MGAM2Q2M2H8 2515 aa6.52□□□□□ -1.37
NUP188-201ENST00000372577 SMR3BP02814 79 aaPredicted RBP6.52□□□□□ -1.37
NUP188-201ENST00000372577 C9orf92A6NGG3 77 aa6.5□□□□□ -1.37
NUP188-201ENST00000372577 USP24Q9UPU5 2620 aa6.5□□□□□ -1.37
NUP188-201ENST00000372577 MIR22HGQ0VDD5 57 aa6.49□□□□□ -1.37
NUP188-201ENST00000372577 IGLV7-46A0A075B6I9 117 aa6.47□□□□□ -1.37
NUP188-201ENST00000372577 RELNP78509 3460 aa6.46□□□□□ -1.37
NUP188-201ENST00000372577 ITPR1Q14643 2758 aa6.46□□□□□ -1.37
NUP188-201ENST00000372577 CENPEQ02224 2701 aa6.46□□□□□ -1.38
NUP188-201ENST00000372577 MAST4O15021 2626 aa6.46□□□□□ -1.38
NUP188-201ENST00000372577 Q1T7F1 81 aa6.46□□□□□ -1.38
NUP188-201ENST00000372577 MMP24-AS1A0A0U1RRL7 71 aa6.45□□□□□ -1.38
NUP188-201ENST00000372577 RBM12B-AS1Q9P1G2 102 aa6.44□□□□□ -1.38
NUP188-201ENST00000372577 LINC00472Q9H8W2 130 aa6.43□□□□□ -1.38
NUP188-201ENST00000372577 LINC01554Q52M75 96 aa6.43□□□□□ -1.38
NUP188-201ENST00000372577 KRTAP1-5Q9BYS1 174 aa6.43□□□□□ -1.38
NUP188-201ENST00000372577 SETXQ7Z333 2677 aaKnown RBP6.41□□□□□ -1.38
NUP188-201ENST00000372577 CDC42SE1Q9NRR8 79 aa6.41□□□□□ -1.38
NUP188-201ENST00000372577 MAP1AP78559 2803 aaPredicted RBP6.4□□□□□ -1.38
NUP188-201ENST00000372577 LUZP6Q538Z0 58 aa6.39□□□□□ -1.39
NUP188-201ENST00000372577 FLNCQ14315 2725 aa6.38□□□□□ -1.39
NUP188-201ENST00000372577 PRR26Q8N8Z3 221 aa6.38□□□□□ -1.39
NUP188-201ENST00000372577 KRTAP4-16G5E9R7 235 aaPredicted RBP6.38□□□□□ -1.39
NUP188-201ENST00000372577 LINC00483Q53H64 154 aa6.38□□□□□ -1.39
NUP188-201ENST00000372577 IGSF10Q6WRI0 2623 aa6.37□□□□□ -1.39
NUP188-201ENST00000372577 HRES1P13985 223 aa6.37□□□□□ -1.39
NUP188-201ENST00000372577 Q8N1X5 172 aa6.36□□□□□ -1.39
NUP188-201ENST00000372577 ZCCHC13Q8WW36 166 aaKnown RBP6.35□□□□□ -1.39
NUP188-201ENST00000372577 UNC79Q9P2D8 2635 aa6.35□□□□□ -1.39
NUP188-201ENST00000372577 Q75L30 129 aa6.33□□□□□ -1.4
NUP188-201ENST00000372577 LINC01558Q9Y6Z2 57 aa6.32□□□□□ -1.4
NUP188-201ENST00000372577 CRYBG3Q68DQ2 2970 aa6.32□□□□□ -1.4
NUP188-201ENST00000372577 A0A0D9SG42 100 aa6.32□□□□□ -1.4
NUP188-201ENST00000372577 Q6ZR54 194 aa6.31□□□□□ -1.4
NUP188-201ENST00000372577 Q6ZSA8 131 aa6.3□□□□□ -1.4
NUP188-201ENST00000372577 Q5W150 140 aa6.29□□□□□ -1.4
NUP188-201ENST00000372577 TACC2O95359 2948 aa6.29□□□□□ -1.4
NUP188-201ENST00000372577 LCE6AA0A183 80 aa6.28□□□□□ -1.4
NUP188-201ENST00000372577 Q8N9P0 234 aaPredicted RBP6.28□□□□□ -1.4
NUP188-201ENST00000372577 ADGRG4Q8IZF6 3080 aa6.28□□□□□ -1.4
NUP188-201ENST00000372577 GCN1Q92616 2671 aaKnown RBP6.28□□□□□ -1.4
NUP188-201ENST00000372577 M0R2T5 61 aa6.27□□□□□ -1.41
NUP188-201ENST00000372577 CYSTM1Q9H1C7 97 aa6.27□□□□□ -1.41
NUP188-201ENST00000372577 CAMK2N1Q7Z7J9 78 aa6.27□□□□□ -1.41
NUP188-201ENST00000372577 UTP20O75691 2785 aaKnown RBP6.27□□□□□ -1.41
NUP188-201ENST00000372577 KRTAP10-1P60331 282 aa6.26□□□□□ -1.41
NUP188-201ENST00000372577 Q5XG85 94 aa6.26□□□□□ -1.41
NUP188-201ENST00000372577 KMT2BQ9UMN6 2715 aaPredicted RBP6.25□□□□□ -1.41
NUP188-201ENST00000372577 TEX15Q9BXT5 2789 aa6.25□□□□□ -1.41
NUP188-201ENST00000372577 A0A1B0GU33 70 aa6.24□□□□□ -1.41
NUP188-201ENST00000372577 SPENQ96T58 3664 aaKnown RBP6.24□□□□□ -1.41
NUP188-201ENST00000372577 KRTAP10-2P60368 255 aa6.23□□□□□ -1.41
NUP188-201ENST00000372577 FP248Q71RG6 208 aaPredicted RBP6.23□□□□□ -1.41
NUP188-201ENST00000372577 TEP1Q99973 2627 aaKnown RBP6.23□□□□□ -1.41
NUP188-201ENST00000372577 BAHCC1Q9P281 2608 aa6.23□□□□□ -1.41
NUP188-201ENST00000372577 KRTAP29-1A8MX34 341 aaPredicted RBP6.23□□□□□ -1.41
NUP188-201ENST00000372577 ASH1LQ9NR48 2969 aaKnown RBP6.22□□□□□ -1.41
NUP188-201ENST00000372577 ASB16-AS1Q495Z4 193 aa6.21□□□□□ -1.42
NUP188-201ENST00000372577 PANO1I0J062 215 aa6.21□□□□□ -1.42
NUP188-201ENST00000372577 COL6A5A8TX70 2615 aa6.2□□□□□ -1.42
NUP188-201ENST00000372577 Q6ZRN7 208 aaPredicted RBP6.2□□□□□ -1.42
NUP188-201ENST00000372577 TENM4Q6N022 2769 aa6.19□□□□□ -1.42
NUP188-201ENST00000372577 DCHS2Q6V1P9 2916 aa6.19□□□□□ -1.42
NUP188-201ENST00000372577 SPINK7P58062 85 aa6.18□□□□□ -1.42
NUP188-201ENST00000372577 DMAC1Q96GE9 116 aa6.18□□□□□ -1.42
NUP188-201ENST00000372577 ITPR2Q14571 2701 aa6.18□□□□□ -1.42
NUP188-201ENST00000372577 CELSR2Q9HCU4 2923 aa6.17□□□□□ -1.42
NUP188-201ENST00000372577 RPS29P62273 56 aaKnown RBP6.17□□□□□ -1.42
NUP188-201ENST00000372577 Q5VV11 94 aa6.17□□□□□ -1.42
NUP188-201ENST00000372577 CSAG1Q6PB30 78 aa6.17□□□□□ -1.42
NUP188-201ENST00000372577 S4R3F8 94 aa6.17□□□□□ -1.42
NUP188-201ENST00000372577 A0A0A0MQY5 61 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms