RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 HAMPP81172 84 aa15.56■□□□□ 0.08
CTSA-203ENST00000372459 TNP2Q05952 138 aa15.56■□□□□ 0.08
CTSA-203ENST00000372459 CYSTM1Q9H1C7 97 aa15.55■□□□□ 0.08
CTSA-203ENST00000372459 TMEM258P61165 79 aa15.54■□□□□ 0.08
CTSA-203ENST00000372459 UBE2AP49459 152 aa15.53■□□□□ 0.08
CTSA-203ENST00000372459 PLAC8Q9NZF1 115 aa15.49■□□□□ 0.07
CTSA-203ENST00000372459 SMIM29Q86T20 159 aa15.47■□□□□ 0.07
CTSA-203ENST00000372459 TRAV7A0A075B6U4 112 aa15.45■□□□□ 0.06
CTSA-203ENST00000372459 C1orf137Q5JT78 98 aa15.45■□□□□ 0.06
CTSA-203ENST00000372459 SVIPQ8NHG7 77 aa15.45■□□□□ 0.06
CTSA-203ENST00000372459 F8WEM9 126 aa15.45■□□□□ 0.06
CTSA-203ENST00000372459 J3KT08 172 aa15.45■□□□□ 0.06
CTSA-203ENST00000372459 KRTAP13-1Q8IUC0 172 aa15.44■□□□□ 0.06
CTSA-203ENST00000372459 RPS28P62857 69 aaKnown RBP15.43■□□□□ 0.06
CTSA-203ENST00000372459 FRAS1Q86XX4 4008 aa15.42■□□□□ 0.06
CTSA-203ENST00000372459 A0A1B0GW54 56 aa15.39■□□□□ 0.05
CTSA-203ENST00000372459 SPRR1BP22528 89 aa15.39■□□□□ 0.05
CTSA-203ENST00000372459 KRTAP10-2P60368 255 aa15.39■□□□□ 0.05
CTSA-203ENST00000372459 HYDINQ4G0P3 5121 aa15.38■□□□□ 0.05
CTSA-203ENST00000372459 A0A1W2PNM2 257 aa15.37■□□□□ 0.05
CTSA-203ENST00000372459 SCXQ7RTU7 201 aa15.36■□□□□ 0.05
CTSA-203ENST00000372459 C20orf197Q8N268 126 aa15.36■□□□□ 0.05
CTSA-203ENST00000372459 Q8NBF4 154 aa15.36■□□□□ 0.05
CTSA-203ENST00000372459 PSORS1C2Q9UIG4 136 aa15.36■□□□□ 0.05
CTSA-203ENST00000372459 IGLV8-61A0A075B6I0 122 aa15.35■□□□□ 0.05
CTSA-203ENST00000372459 DNAH11Q96DT5 4516 aa15.34■□□□□ 0.05
CTSA-203ENST00000372459 NREPQ16612 68 aa15.33■□□□□ 0.04
CTSA-203ENST00000372459 DNAH8Q96JB1 4490 aa15.33■□□□□ 0.04
CTSA-203ENST00000372459 DNAH5Q8TE73 4624 aa15.32■□□□□ 0.04
CTSA-203ENST00000372459 SPRR4Q96PI1 79 aa15.32■□□□□ 0.04
CTSA-203ENST00000372459 IGFL1Q6UW32 110 aa15.3■□□□□ 0.04
CTSA-203ENST00000372459 KLKP1Q107X0 134 aa15.29■□□□□ 0.04
CTSA-203ENST00000372459 IGKV4-1P06312 121 aa15.27■□□□□ 0.04
CTSA-203ENST00000372459 FAM30AQ9NZY2 134 aa15.25■□□□□ 0.03
CTSA-203ENST00000372459 FAT2Q9NYQ8 4349 aa15.25■□□□□ 0.03
CTSA-203ENST00000372459 BPY2O14599 106 aa15.24■□□□□ 0.03
CTSA-203ENST00000372459 ZNF861PO60384 105 aa15.24■□□□□ 0.03
CTSA-203ENST00000372459 CIRBP-AS1Q8TBR5 109 aa15.24■□□□□ 0.03
CTSA-203ENST00000372459 ZNF706Q9Y5V0 76 aaPredicted RBP15.23■□□□□ 0.03
CTSA-203ENST00000372459 H7BZZ5 65 aa15.22■□□□□ 0.03
CTSA-203ENST00000372459 A0A0G2JQZ4 141 aa15.22■□□□□ 0.03
CTSA-203ENST00000372459 Q6ZSA8 131 aa15.21■□□□□ 0.03
CTSA-203ENST00000372459 FAM236DA0A1B0GTK5 79 aa15.2■□□□□ 0.02
CTSA-203ENST00000372459 FAM236CP0DP71 79 aa15.2■□□□□ 0.02
CTSA-203ENST00000372459 KRTAP10-1P60331 282 aa15.2■□□□□ 0.02
CTSA-203ENST00000372459 PKD1P98161 4303 aa15.19■□□□□ 0.02
CTSA-203ENST00000372459 Q8N9L7 120 aa15.19■□□□□ 0.02
CTSA-203ENST00000372459 SRRM2Q9UQ35 2752 aaKnown RBP15.19■□□□□ 0.02
CTSA-203ENST00000372459 LINC00483Q53H64 154 aa15.18■□□□□ 0.02
CTSA-203ENST00000372459 SACSQ9NZJ4 4579 aa15.18■□□□□ 0.02
CTSA-203ENST00000372459 LCE6AA0A183 80 aa15.17■□□□□ 0.02
CTSA-203ENST00000372459 IGLV7-43P04211 117 aa15.16■□□□□ 0.02
CTSA-203ENST00000372459 NDUFC1O43677 76 aa15.15■□□□□ 0.02
CTSA-203ENST00000372459 OXTP01178 125 aa15.14■□□□□ 0.01
CTSA-203ENST00000372459 SNURFQ9Y675 71 aa15.14■□□□□ 0.01
CTSA-203ENST00000372459 OCR1Q9BZK8 76 aa15.11■□□□□ 0.01
CTSA-203ENST00000372459 A0A087WSZ3 146 aa15.1■□□□□ 0.01
CTSA-203ENST00000372459 IGLV9-49A0A0B4J1Y8 123 aa15.09■□□□□ 0.01
CTSA-203ENST00000372459 LINC00336Q6ZUF6 198 aa15.08■□□□□ 0
CTSA-203ENST00000372459 TMEM254Q8TBM7 123 aa15.07■□□□□ 0
CTSA-203ENST00000372459 RPL37AP61513 92 aaKnown RBP15.06■□□□□ 0
CTSA-203ENST00000372459 SERP1Q9Y6X1 66 aa15.05■□□□□ 0
CTSA-203ENST00000372459 ATP5EP56381 51 aaPredicted RBP15.02■□□□□ -0
CTSA-203ENST00000372459 ANAPC11Q9NYG5 84 aa15□□□□□ -0.01
CTSA-203ENST00000372459 A0A0U1RQV1 116 aa14.98□□□□□ -0.01
CTSA-203ENST00000372459 DSCR10P59022 87 aa14.98□□□□□ -0.01
CTSA-203ENST00000372459 MOBPQ13875 183 aa14.97□□□□□ -0.01
CTSA-203ENST00000372459 LRP1BQ9NZR2 4599 aa14.93□□□□□ -0.02
CTSA-203ENST00000372459 Q5XG85 94 aa14.93□□□□□ -0.02
CTSA-203ENST00000372459 K7EQZ3 153 aa14.91□□□□□ -0.02
CTSA-203ENST00000372459 DEFB116Q30KQ4 102 aa14.91□□□□□ -0.02
CTSA-203ENST00000372459 LINC00472Q9H8W2 130 aa14.87□□□□□ -0.03
CTSA-203ENST00000372459 A0A1B0GVY2 172 aa14.87□□□□□ -0.03
CTSA-203ENST00000372459 HRCT1Q6UXD1 115 aa14.86□□□□□ -0.03
CTSA-203ENST00000372459 C5orf47Q569G3 176 aa14.84□□□□□ -0.03
CTSA-203ENST00000372459 HCG22E2RYF7 251 aa14.84□□□□□ -0.03
CTSA-203ENST00000372459 RYR2Q92736 4967 aa14.83□□□□□ -0.03
CTSA-203ENST00000372459 PKHD1P08F94 4074 aa14.82□□□□□ -0.04
CTSA-203ENST00000372459 C4orf26Q17RF5 130 aa14.8□□□□□ -0.04
CTSA-203ENST00000372459 SSBP3-AS1Q7Z2R9 100 aa14.79□□□□□ -0.04
CTSA-203ENST00000372459 SMIM26A0A096LP01 95 aa14.78□□□□□ -0.04
CTSA-203ENST00000372459 A8MWP4 228 aa14.76□□□□□ -0.05
CTSA-203ENST00000372459 DYNC1H1Q14204 4646 aaKnown RBP14.76□□□□□ -0.05
CTSA-203ENST00000372459 FAM229BQ4G0N7 80 aa14.75□□□□□ -0.05
CTSA-203ENST00000372459 VPS13BQ7Z7G8 4022 aa14.75□□□□□ -0.05
CTSA-203ENST00000372459 ZCCHC13Q8WW36 166 aaKnown RBP14.74□□□□□ -0.05
CTSA-203ENST00000372459 PRR15Q8IV56 129 aa14.73□□□□□ -0.05
CTSA-203ENST00000372459 Q96NJ1 140 aa14.73□□□□□ -0.05
CTSA-203ENST00000372459 CD164Q04900 197 aa14.73□□□□□ -0.05
CTSA-203ENST00000372459 KMT2CQ8NEZ4 4911 aaKnown RBP14.72□□□□□ -0.05
CTSA-203ENST00000372459 A0A087X002 238 aa14.71□□□□□ -0.05
CTSA-203ENST00000372459 FP248Q71RG6 208 aaPredicted RBP14.69□□□□□ -0.06
CTSA-203ENST00000372459 KRTAP1-4P0C5Y4 121 aa14.68□□□□□ -0.06
CTSA-203ENST00000372459 NDUFB1O75438 58 aa14.67□□□□□ -0.06
CTSA-203ENST00000372459 KRTAP13-2Q52LG2 175 aa14.67□□□□□ -0.06
CTSA-203ENST00000372459 WFDC13Q8IUB5 93 aa14.65□□□□□ -0.06
CTSA-203ENST00000372459 KRTAP29-1A8MX34 341 aaPredicted RBP14.64□□□□□ -0.07
CTSA-203ENST00000372459 SPINK6Q6UWN8 80 aa14.64□□□□□ -0.07
CTSA-203ENST00000372459 SMR3BP02814 79 aaPredicted RBP14.61□□□□□ -0.07
CTSA-203ENST00000372459 CASC2Q6XLA1 102 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 170.7 ms