RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 PHF5AQ7RTV0 110 aaKnown RBP11.31□□□□□ -0.6
CD40-201ENST00000372276 Q8N9L7 120 aa11.31□□□□□ -0.6
CD40-201ENST00000372276 OCR1Q9BZK8 76 aa11.31□□□□□ -0.6
CD40-201ENST00000372276 EPM2AB3EWF7 344 aa11.3□□□□□ -0.6
CD40-201ENST00000372276 TMEM254Q8TBM7 123 aa11.28□□□□□ -0.6
CD40-201ENST00000372276 STAB2Q8WWQ8 2551 aa11.28□□□□□ -0.6
CD40-201ENST00000372276 CHTF8P0CG12 524 aa11.27□□□□□ -0.61
CD40-201ENST00000372276 DSCR10P59022 87 aa11.26□□□□□ -0.61
CD40-201ENST00000372276 SERP1Q9Y6X1 66 aa11.24□□□□□ -0.61
CD40-201ENST00000372276 SNURFQ9Y675 71 aa11.24□□□□□ -0.61
CD40-201ENST00000372276 A0A0U1RQV1 116 aa11.21□□□□□ -0.61
CD40-201ENST00000372276 SPACA4Q8TDM5 124 aa11.21□□□□□ -0.61
CD40-201ENST00000372276 HCG22E2RYF7 251 aa11.2□□□□□ -0.62
CD40-201ENST00000372276 RPL37AP61513 92 aaKnown RBP11.2□□□□□ -0.62
CD40-201ENST00000372276 SVIPQ8NHG7 77 aa11.2□□□□□ -0.62
CD40-201ENST00000372276 A0A087WSZ3 146 aa11.19□□□□□ -0.62
CD40-201ENST00000372276 A0A087WTM6 91 aa11.19□□□□□ -0.62
CD40-201ENST00000372276 LCE6AA0A183 80 aa11.19□□□□□ -0.62
CD40-201ENST00000372276 KRTAP13-1Q8IUC0 172 aa11.19□□□□□ -0.62
CD40-201ENST00000372276 KRTAP11-1Q8IUC1 163 aa11.19□□□□□ -0.62
CD40-201ENST00000372276 K7EQZ3 153 aa11.18□□□□□ -0.62
CD40-201ENST00000372276 ZNF706Q9Y5V0 76 aaPredicted RBP11.17□□□□□ -0.62
CD40-201ENST00000372276 C5orf47Q569G3 176 aa11.17□□□□□ -0.62
CD40-201ENST00000372276 WWC2-AS2Q96NR7 200 aa11.15□□□□□ -0.62
CD40-201ENST00000372276 Q6ZR54 194 aa11.13□□□□□ -0.63
CD40-201ENST00000372276 FAM30AQ9NZY2 134 aa11.12□□□□□ -0.63
CD40-201ENST00000372276 DNAH10Q8IVF4 4471 aa11.11□□□□□ -0.63
CD40-201ENST00000372276 RTL8CO15255 209 aa11.09□□□□□ -0.63
CD40-201ENST00000372276 LINC00483Q53H64 154 aa11.09□□□□□ -0.63
CD40-201ENST00000372276 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.09□□□□□ -0.63
CD40-201ENST00000372276 PANO1I0J062 215 aa11.09□□□□□ -0.63
CD40-201ENST00000372276 A8MWP4 228 aa11.08□□□□□ -0.64
CD40-201ENST00000372276 LINC00472Q9H8W2 130 aa11.08□□□□□ -0.64
CD40-201ENST00000372276 PLAC8Q9NZF1 115 aa11.08□□□□□ -0.64
CD40-201ENST00000372276 PLECQ15149 4684 aaKnown RBP11.07□□□□□ -0.64
CD40-201ENST00000372276 A0A0G2JQZ4 141 aa11.07□□□□□ -0.64
CD40-201ENST00000372276 OXTP01178 125 aa11.07□□□□□ -0.64
CD40-201ENST00000372276 PRR15Q8IV56 129 aa11.07□□□□□ -0.64
CD40-201ENST00000372276 VPS13DQ5THJ4 4388 aa11.06□□□□□ -0.64
CD40-201ENST00000372276 DNAH7Q8WXX0 4024 aa11.05□□□□□ -0.64
CD40-201ENST00000372276 SMIM26A0A096LP01 95 aa11.05□□□□□ -0.64
CD40-201ENST00000372276 H3BPC8 53 aa11.04□□□□□ -0.64
CD40-201ENST00000372276 NDUFB1O75438 58 aa11.04□□□□□ -0.64
CD40-201ENST00000372276 C1orf134Q5TEV5 83 aa11.04□□□□□ -0.64
CD40-201ENST00000372276 IGLV5-52A0A0A0MRZ9 124 aa11.03□□□□□ -0.64
CD40-201ENST00000372276 MP68P56378 58 aa11.03□□□□□ -0.64
CD40-201ENST00000372276 ZCCHC13Q8WW36 166 aaKnown RBP11.03□□□□□ -0.64
CD40-201ENST00000372276 KRTAP29-1A8MX34 341 aaPredicted RBP11.02□□□□□ -0.64
CD40-201ENST00000372276 DEFB116Q30KQ4 102 aa11.01□□□□□ -0.65
CD40-201ENST00000372276 CASC2Q6XLA1 102 aa11.01□□□□□ -0.65
CD40-201ENST00000372276 ZNF861PO60384 105 aa11□□□□□ -0.65
CD40-201ENST00000372276 LYSTQ99698 3801 aa10.99□□□□□ -0.65
CD40-201ENST00000372276 WFDC13Q8IUB5 93 aa10.98□□□□□ -0.65
CD40-201ENST00000372276 PSORS1C2Q9UIG4 136 aa10.98□□□□□ -0.65
CD40-201ENST00000372276 CSMD3Q7Z407 3707 aa10.97□□□□□ -0.65
CD40-201ENST00000372276 Q5XG85 94 aa10.96□□□□□ -0.65
CD40-201ENST00000372276 IGLV9-49A0A0B4J1Y8 123 aa10.95□□□□□ -0.66
CD40-201ENST00000372276 TENM2Q9NT68 2774 aa10.93□□□□□ -0.66
CD40-201ENST00000372276 hDV103S1A0JD37 113 aa10.92□□□□□ -0.66
CD40-201ENST00000372276 MOBPQ13875 183 aa10.91□□□□□ -0.66
CD40-201ENST00000372276 STARD9Q9P2P6 4700 aa10.9□□□□□ -0.66
CD40-201ENST00000372276 TP53AIP1Q9HCN2 124 aa10.9□□□□□ -0.66
CD40-201ENST00000372276 CYP4F30PQ9H0H9 118 aa10.89□□□□□ -0.67
CD40-201ENST00000372276 MMP24-AS1A0A0U1RRL7 71 aa10.87□□□□□ -0.67
CD40-201ENST00000372276 CDK2AP2O75956 126 aa10.87□□□□□ -0.67
CD40-201ENST00000372276 IGLV7-43P04211 117 aa10.87□□□□□ -0.67
CD40-201ENST00000372276 Q96NJ1 140 aa10.87□□□□□ -0.67
CD40-201ENST00000372276 TRAV22A0A0B4J277 110 aa10.86□□□□□ -0.67
CD40-201ENST00000372276 H0Y9P7 68 aa10.86□□□□□ -0.67
CD40-201ENST00000372276 LY6G6CO95867 125 aa10.86□□□□□ -0.67
CD40-201ENST00000372276 C4orf26Q17RF5 130 aa10.86□□□□□ -0.67
CD40-201ENST00000372276 DNAH17Q9UFH2 4485 aa10.86□□□□□ -0.67
CD40-201ENST00000372276 CD164Q04900 197 aa10.85□□□□□ -0.67
CD40-201ENST00000372276 ASB16-AS1Q495Z4 193 aa10.84□□□□□ -0.67
CD40-201ENST00000372276 SPANXA2-OT1Q8N9U9 137 aa10.84□□□□□ -0.67
CD40-201ENST00000372276 LINC00208Q96KT6 92 aa10.84□□□□□ -0.67
CD40-201ENST00000372276 FP248Q71RG6 208 aaPredicted RBP10.82□□□□□ -0.68
CD40-201ENST00000372276 SSBP3-AS1Q7Z2R9 100 aa10.82□□□□□ -0.68
CD40-201ENST00000372276 A0A1B0GVX0 72 aa10.81□□□□□ -0.68
CD40-201ENST00000372276 C8orf17Q9NRJ1 99 aa10.81□□□□□ -0.68
CD40-201ENST00000372276 DNAH6Q9C0G6 4158 aa10.81□□□□□ -0.68
CD40-201ENST00000372276 HRCT1Q6UXD1 115 aa10.8□□□□□ -0.68
CD40-201ENST00000372276 HECTD4Q9Y4D8 3996 aa10.79□□□□□ -0.68
CD40-201ENST00000372276 KMT2CQ8NEZ4 4911 aaKnown RBP10.79□□□□□ -0.68
CD40-201ENST00000372276 C1orf64Q8NEQ6 169 aa10.77□□□□□ -0.68
CD40-201ENST00000372276 SRRM2Q9UQ35 2752 aaKnown RBP10.75□□□□□ -0.69
CD40-201ENST00000372276 DNAH2Q9P225 4427 aa10.75□□□□□ -0.69
CD40-201ENST00000372276 MRPL34Q9BQ48 92 aaKnown RBP10.72□□□□□ -0.69
CD40-201ENST00000372276 IGHV6-1A0A0B4J1U7 121 aa10.71□□□□□ -0.69
CD40-201ENST00000372276 CIRBP-AS1Q8TBR5 109 aa10.71□□□□□ -0.69
CD40-201ENST00000372276 ANAPC11Q9NYG5 84 aa10.7□□□□□ -0.7
CD40-201ENST00000372276 ALMS1Q8TCU4 4167 aa10.7□□□□□ -0.7
CD40-201ENST00000372276 FAM229BQ4G0N7 80 aa10.69□□□□□ -0.7
CD40-201ENST00000372276 Q6ZSA8 131 aa10.69□□□□□ -0.7
CD40-201ENST00000372276 SACSQ9NZJ4 4579 aa10.69□□□□□ -0.7
CD40-201ENST00000372276 C8orf87E5RJ46 101 aa10.68□□□□□ -0.7
CD40-201ENST00000372276 Q1T7F1 81 aa10.68□□□□□ -0.7
CD40-201ENST00000372276 V9GYY9 64 aa10.68□□□□□ -0.7
CD40-201ENST00000372276 KRTAP10-2P60368 255 aa10.66□□□□□ -0.7
CD40-201ENST00000372276 KMT2AQ03164 3969 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms