RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 DPH3Q96FX2 82 aa18.02■□□□□ 0.48
SSBP3-204ENST00000371320 RPS28P62857 69 aaKnown RBP18.01■□□□□ 0.47
SSBP3-204ENST00000371320 SNURFQ9Y675 71 aa18.01■□□□□ 0.47
SSBP3-204ENST00000371320 PANO1I0J062 215 aa17.99■□□□□ 0.47
SSBP3-204ENST00000371320 H7BZZ5 65 aa17.97■□□□□ 0.47
SSBP3-204ENST00000371320 DSCR10P59022 87 aa17.95■□□□□ 0.46
SSBP3-204ENST00000371320 OCR1Q9BZK8 76 aa17.95■□□□□ 0.46
SSBP3-204ENST00000371320 PRKDCP78527 4128 aaKnown RBP17.95■□□□□ 0.46
SSBP3-204ENST00000371320 SPRR1BP22528 89 aa17.94■□□□□ 0.46
SSBP3-204ENST00000371320 VPS13DQ5THJ4 4388 aa17.93■□□□□ 0.46
SSBP3-204ENST00000371320 STARD9Q9P2P6 4700 aa17.92■□□□□ 0.46
SSBP3-204ENST00000371320 K7EQZ3 153 aa17.89■□□□□ 0.45
SSBP3-204ENST00000371320 TMEM254Q8TBM7 123 aa17.89■□□□□ 0.45
SSBP3-204ENST00000371320 A0A087WSZ3 146 aa17.89■□□□□ 0.45
SSBP3-204ENST00000371320 A0A087WTM6 91 aa17.89■□□□□ 0.45
SSBP3-204ENST00000371320 FAM236DA0A1B0GTK5 79 aa17.89■□□□□ 0.45
SSBP3-204ENST00000371320 FAM236CP0DP71 79 aa17.89■□□□□ 0.45
SSBP3-204ENST00000371320 SPACA4Q8TDM5 124 aa17.89■□□□□ 0.45
SSBP3-204ENST00000371320 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.88■□□□□ 0.45
SSBP3-204ENST00000371320 MEGF8Q7Z7M0 2845 aa17.87■□□□□ 0.45
SSBP3-204ENST00000371320 NDUFC1O43677 76 aa17.84■□□□□ 0.45
SSBP3-204ENST00000371320 SRRM2Q9UQ35 2752 aaKnown RBP17.84■□□□□ 0.45
SSBP3-204ENST00000371320 KRTAP13-1Q8IUC0 172 aa17.84■□□□□ 0.45
SSBP3-204ENST00000371320 DEFB116Q30KQ4 102 aa17.81■□□□□ 0.44
SSBP3-204ENST00000371320 FAM30AQ9NZY2 134 aa17.81■□□□□ 0.44
SSBP3-204ENST00000371320 OXTP01178 125 aa17.78■□□□□ 0.44
SSBP3-204ENST00000371320 Q6ZR54 194 aa17.77■□□□□ 0.44
SSBP3-204ENST00000371320 A0A0U1RQV1 116 aa17.76■□□□□ 0.43
SSBP3-204ENST00000371320 RTL8CO15255 209 aa17.76■□□□□ 0.43
SSBP3-204ENST00000371320 HCG22E2RYF7 251 aa17.75■□□□□ 0.43
SSBP3-204ENST00000371320 KRTAP21-3Q3LHN1 58 aa17.72■□□□□ 0.43
SSBP3-204ENST00000371320 SERP1Q9Y6X1 66 aa17.67■□□□□ 0.42
SSBP3-204ENST00000371320 RPL37AP61513 92 aaKnown RBP17.66■□□□□ 0.42
SSBP3-204ENST00000371320 HECTD4Q9Y4D8 3996 aa17.65■□□□□ 0.42
SSBP3-204ENST00000371320 LCE6AA0A183 80 aa17.65■□□□□ 0.42
SSBP3-204ENST00000371320 DNAH2Q9P225 4427 aa17.63■□□□□ 0.41
SSBP3-204ENST00000371320 ATP5EP56381 51 aaPredicted RBP17.62■□□□□ 0.41
SSBP3-204ENST00000371320 C1orf134Q5TEV5 83 aa17.62■□□□□ 0.41
SSBP3-204ENST00000371320 KMT2AQ03164 3969 aa17.61■□□□□ 0.41
SSBP3-204ENST00000371320 LINC00472Q9H8W2 130 aa17.61■□□□□ 0.41
SSBP3-204ENST00000371320 PLAC8Q9NZF1 115 aa17.61■□□□□ 0.41
SSBP3-204ENST00000371320 WFDC13Q8IUB5 93 aa17.6■□□□□ 0.41
SSBP3-204ENST00000371320 PSORS1C2Q9UIG4 136 aa17.6■□□□□ 0.41
SSBP3-204ENST00000371320 IGLV5-52A0A0A0MRZ9 124 aa17.6■□□□□ 0.41
SSBP3-204ENST00000371320 IGLV9-49A0A0B4J1Y8 123 aa17.6■□□□□ 0.41
SSBP3-204ENST00000371320 DNAH17Q9UFH2 4485 aa17.58■□□□□ 0.4
SSBP3-204ENST00000371320 LINC00483Q53H64 154 aa17.57■□□□□ 0.4
SSBP3-204ENST00000371320 ZNF706Q9Y5V0 76 aaPredicted RBP17.56■□□□□ 0.4
SSBP3-204ENST00000371320 PRR15Q8IV56 129 aa17.56■□□□□ 0.4
SSBP3-204ENST00000371320 A8MWP4 228 aa17.54■□□□□ 0.4
SSBP3-204ENST00000371320 C5orf47Q569G3 176 aa17.54■□□□□ 0.4
SSBP3-204ENST00000371320 SVIPQ8NHG7 77 aa17.54■□□□□ 0.4
SSBP3-204ENST00000371320 LY6G6CO95867 125 aa17.52■□□□□ 0.39
SSBP3-204ENST00000371320 FBN3Q75N90 2809 aa17.5■□□□□ 0.39
SSBP3-204ENST00000371320 KRTAP29-1A8MX34 341 aaPredicted RBP17.5■□□□□ 0.39
SSBP3-204ENST00000371320 ZNF861PO60384 105 aa17.49■□□□□ 0.39
SSBP3-204ENST00000371320 CASC2Q6XLA1 102 aa17.48■□□□□ 0.39
SSBP3-204ENST00000371320 ZCCHC13Q8WW36 166 aaKnown RBP17.47■□□□□ 0.39
SSBP3-204ENST00000371320 WWC2-AS2Q96NR7 200 aa17.44■□□□□ 0.38
SSBP3-204ENST00000371320 TGP01266 2768 aa17.44■□□□□ 0.38
SSBP3-204ENST00000371320 Q5XG85 94 aa17.44■□□□□ 0.38
SSBP3-204ENST00000371320 HRCT1Q6UXD1 115 aa17.42■□□□□ 0.38
SSBP3-204ENST00000371320 DNAH8Q96JB1 4490 aa17.4■□□□□ 0.38
SSBP3-204ENST00000371320 MOBPQ13875 183 aa17.4■□□□□ 0.38
SSBP3-204ENST00000371320 ANAPC11Q9NYG5 84 aa17.4■□□□□ 0.38
SSBP3-204ENST00000371320 NDUFB1O75438 58 aa17.38■□□□□ 0.37
SSBP3-204ENST00000371320 Q96NJ1 140 aa17.37■□□□□ 0.37
SSBP3-204ENST00000371320 MP68P56378 58 aa17.36■□□□□ 0.37
SSBP3-204ENST00000371320 C4orf26Q17RF5 130 aa17.36■□□□□ 0.37
SSBP3-204ENST00000371320 SMIM26A0A096LP01 95 aa17.35■□□□□ 0.37
SSBP3-204ENST00000371320 MMP24-AS1A0A0U1RRL7 71 aa17.32■□□□□ 0.36
SSBP3-204ENST00000371320 IGLV7-43P04211 117 aa17.32■□□□□ 0.36
SSBP3-204ENST00000371320 FRAS1Q86XX4 4008 aa17.31■□□□□ 0.36
SSBP3-204ENST00000371320 LINC00208Q96KT6 92 aa17.27■□□□□ 0.35
SSBP3-204ENST00000371320 DNAH6Q9C0G6 4158 aa17.26■□□□□ 0.35
SSBP3-204ENST00000371320 hDV103S1A0JD37 113 aa17.26■□□□□ 0.35
SSBP3-204ENST00000371320 H0Y9P7 68 aa17.25■□□□□ 0.35
SSBP3-204ENST00000371320 KRTAP10-2P60368 255 aa17.25■□□□□ 0.35
SSBP3-204ENST00000371320 FP248Q71RG6 208 aaPredicted RBP17.24■□□□□ 0.35
SSBP3-204ENST00000371320 CIRBP-AS1Q8TBR5 109 aa17.22■□□□□ 0.35
SSBP3-204ENST00000371320 TRAV22A0A0B4J277 110 aa17.21■□□□□ 0.35
SSBP3-204ENST00000371320 H3BPC8 53 aa17.2■□□□□ 0.34
SSBP3-204ENST00000371320 FAM229BQ4G0N7 80 aa17.19■□□□□ 0.34
SSBP3-204ENST00000371320 C8orf17Q9NRJ1 99 aa17.17■□□□□ 0.34
SSBP3-204ENST00000371320 CDK2AP2O75956 126 aa17.16■□□□□ 0.34
SSBP3-204ENST00000371320 ASB16-AS1Q495Z4 193 aa17.16■□□□□ 0.34
SSBP3-204ENST00000371320 A0A1B0GVX0 72 aa17.15■□□□□ 0.34
SSBP3-204ENST00000371320 DNAH5Q8TE73 4624 aa17.15■□□□□ 0.34
SSBP3-204ENST00000371320 IGHV6-1A0A0B4J1U7 121 aa17.14■□□□□ 0.33
SSBP3-204ENST00000371320 DNAH11Q96DT5 4516 aa17.13■□□□□ 0.33
SSBP3-204ENST00000371320 PRR4Q16378 134 aa17.11■□□□□ 0.33
SSBP3-204ENST00000371320 C1orf64Q8NEQ6 169 aa17.11■□□□□ 0.33
SSBP3-204ENST00000371320 CYP4F30PQ9H0H9 118 aa17.11■□□□□ 0.33
SSBP3-204ENST00000371320 ALMS1Q8TCU4 4167 aa17.08■□□□□ 0.33
SSBP3-204ENST00000371320 TP53AIP1Q9HCN2 124 aa17.07■□□□□ 0.32
SSBP3-204ENST00000371320 KRTAP10-1P60331 282 aa17.05■□□□□ 0.32
SSBP3-204ENST00000371320 Q6ZSA8 131 aa17.04■□□□□ 0.32
SSBP3-204ENST00000371320 SSBP3-AS1Q7Z2R9 100 aa17.04■□□□□ 0.32
SSBP3-204ENST00000371320 CD164Q04900 197 aa17.03■□□□□ 0.32
SSBP3-204ENST00000371320 MPLKIPQ8TAP9 179 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms