RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 GCN1Q92616 2671 aaKnown RBP10.61□□□□□ -0.71
PTP4A1-201ENST00000370651 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.6□□□□□ -0.71
PTP4A1-201ENST00000370651 A0A0D9SG42 100 aa10.6□□□□□ -0.71
PTP4A1-201ENST00000370651 LINC00472Q9H8W2 130 aa10.59□□□□□ -0.71
PTP4A1-201ENST00000370651 UNC79Q9P2D8 2635 aa10.59□□□□□ -0.71
PTP4A1-201ENST00000370651 SMR3BP02814 79 aaPredicted RBP10.58□□□□□ -0.72
PTP4A1-201ENST00000370651 SPRR1BP22528 89 aa10.56□□□□□ -0.72
PTP4A1-201ENST00000370651 LINC01554Q52M75 96 aa10.54□□□□□ -0.72
PTP4A1-201ENST00000370651 A0A1B0GU33 70 aa10.53□□□□□ -0.72
PTP4A1-201ENST00000370651 WDFY4Q6ZS81 3184 aa10.52□□□□□ -0.72
PTP4A1-201ENST00000370651 PRAC1Q96KF2 57 aa10.52□□□□□ -0.73
PTP4A1-201ENST00000370651 ZNF292O60281 2723 aa10.51□□□□□ -0.73
PTP4A1-201ENST00000370651 SPINK7P58062 85 aa10.51□□□□□ -0.73
PTP4A1-201ENST00000370651 KRTAP26-1Q6PEX3 210 aa10.51□□□□□ -0.73
PTP4A1-201ENST00000370651 MAP1AP78559 2803 aaPredicted RBP10.5□□□□□ -0.73
PTP4A1-201ENST00000370651 NBEAL1Q6ZS30 2694 aa10.49□□□□□ -0.73
PTP4A1-201ENST00000370651 UNC80Q8N2C7 3258 aa10.49□□□□□ -0.73
PTP4A1-201ENST00000370651 TNP2Q05952 138 aa10.49□□□□□ -0.73
PTP4A1-201ENST00000370651 NOTCH1P46531 2555 aa10.47□□□□□ -0.73
PTP4A1-201ENST00000370651 STAB1Q9NY15 2570 aa10.46□□□□□ -0.74
PTP4A1-201ENST00000370651 TRIOO75962 3097 aa10.46□□□□□ -0.74
PTP4A1-201ENST00000370651 TEX15Q9BXT5 2789 aa10.45□□□□□ -0.74
PTP4A1-201ENST00000370651 Q5W150 140 aa10.44□□□□□ -0.74
PTP4A1-201ENST00000370651 PLAC8Q9NZF1 115 aa10.42□□□□□ -0.74
PTP4A1-201ENST00000370651 NBEAL2Q6ZNJ1 2754 aa10.42□□□□□ -0.74
PTP4A1-201ENST00000370651 FRYQ5TBA9 3013 aa10.42□□□□□ -0.74
PTP4A1-201ENST00000370651 COX6B2Q6YFQ2 88 aa10.41□□□□□ -0.74
PTP4A1-201ENST00000370651 VPS13AQ96RL7 3174 aa10.4□□□□□ -0.75
PTP4A1-201ENST00000370651 ZCCHC13Q8WW36 166 aaKnown RBP10.39□□□□□ -0.75
PTP4A1-201ENST00000370651 XIRP2A4UGR9 3374 aa10.37□□□□□ -0.75
PTP4A1-201ENST00000370651 KRTAP4-16G5E9R7 235 aaPredicted RBP10.36□□□□□ -0.75
PTP4A1-201ENST00000370651 TEP1Q99973 2627 aaKnown RBP10.36□□□□□ -0.75
PTP4A1-201ENST00000370651 CSAG1Q6PB30 78 aa10.35□□□□□ -0.75
PTP4A1-201ENST00000370651 KRTAP1-5Q9BYS1 174 aa10.35□□□□□ -0.75
PTP4A1-201ENST00000370651 DSPP15924 2871 aaKnown RBP10.33□□□□□ -0.76
PTP4A1-201ENST00000370651 KRTAP29-1A8MX34 341 aaPredicted RBP10.33□□□□□ -0.76
PTP4A1-201ENST00000370651 J3QL48 77 aa10.33□□□□□ -0.76
PTP4A1-201ENST00000370651 FREM2Q5SZK8 3169 aa10.31□□□□□ -0.76
PTP4A1-201ENST00000370651 DMAC1Q96GE9 116 aa10.3□□□□□ -0.76
PTP4A1-201ENST00000370651 COL6A5A8TX70 2615 aa10.3□□□□□ -0.76
PTP4A1-201ENST00000370651 H3BS24 57 aa10.29□□□□□ -0.76
PTP4A1-201ENST00000370651 Q6ZR54 194 aa10.28□□□□□ -0.76
PTP4A1-201ENST00000370651 LUZP6Q538Z0 58 aa10.27□□□□□ -0.77
PTP4A1-201ENST00000370651 CDH23Q9H251 3354 aa10.25□□□□□ -0.77
PTP4A1-201ENST00000370651 SETXQ7Z333 2677 aaKnown RBP10.25□□□□□ -0.77
PTP4A1-201ENST00000370651 NBEAQ8NFP9 2946 aa10.24□□□□□ -0.77
PTP4A1-201ENST00000370651 UBR5O95071 2799 aaPredicted RBP10.23□□□□□ -0.77
PTP4A1-201ENST00000370651 FLG2Q5D862 2391 aaPredicted RBP10.21□□□□□ -0.77
PTP4A1-201ENST00000370651 LINC00483Q53H64 154 aa10.21□□□□□ -0.77
PTP4A1-201ENST00000370651 KALRNO60229 2985 aa10.19□□□□□ -0.78
PTP4A1-201ENST00000370651 Q6ZSA8 131 aa10.18□□□□□ -0.78
PTP4A1-201ENST00000370651 DMBT1Q9UGM3 2413 aaPredicted RBP10.14□□□□□ -0.79
PTP4A1-201ENST00000370651 LCE6AA0A183 80 aa10.14□□□□□ -0.79
PTP4A1-201ENST00000370651 CELSR3Q9NYQ7 3312 aa10.13□□□□□ -0.79
PTP4A1-201ENST00000370651 ASB16-AS1Q495Z4 193 aa10.12□□□□□ -0.79
PTP4A1-201ENST00000370651 CAMK2N1Q7Z7J9 78 aa10.12□□□□□ -0.79
PTP4A1-201ENST00000370651 S4R3F8 94 aa10.11□□□□□ -0.79
PTP4A1-201ENST00000370651 PANO1I0J062 215 aa10.11□□□□□ -0.79
PTP4A1-201ENST00000370651 IGSF10Q6WRI0 2623 aa10.09□□□□□ -0.79
PTP4A1-201ENST00000370651 STAB2Q8WWQ8 2551 aa10.08□□□□□ -0.8
PTP4A1-201ENST00000370651 RPL37P61927 97 aaKnown RBP10.08□□□□□ -0.8
PTP4A1-201ENST00000370651 BAHCC1Q9P281 2608 aa10.06□□□□□ -0.8
PTP4A1-201ENST00000370651 SZT2Q5T011 3432 aa10.06□□□□□ -0.8
PTP4A1-201ENST00000370651 H1FX-AS1Q4G0G2 97 aa10.05□□□□□ -0.8
PTP4A1-201ENST00000370651 A0A087X002 238 aa10.05□□□□□ -0.8
PTP4A1-201ENST00000370651 NOTCH2NLQ7Z3S9 236 aa10.05□□□□□ -0.8
PTP4A1-201ENST00000370651 ROMO1P60602 79 aa10.04□□□□□ -0.8
PTP4A1-201ENST00000370651 ITPR1Q14643 2758 aa10.04□□□□□ -0.8
PTP4A1-201ENST00000370651 SPATA8Q6RVD6 105 aa10.04□□□□□ -0.8
PTP4A1-201ENST00000370651 A6NN06 94 aa10.03□□□□□ -0.8
PTP4A1-201ENST00000370651 LAMA1P25391 3075 aa10.01□□□□□ -0.81
PTP4A1-201ENST00000370651 NSD1Q96L73 2696 aaPredicted RBP9.99□□□□□ -0.81
PTP4A1-201ENST00000370651 KRTAP7-1Q8IUC3 87 aa9.99□□□□□ -0.81
PTP4A1-201ENST00000370651 KRTAP11-1Q8IUC1 163 aa9.98□□□□□ -0.81
PTP4A1-201ENST00000370651 KRTAP10-1P60331 282 aa9.97□□□□□ -0.81
PTP4A1-201ENST00000370651 VCANP13611 3396 aa9.97□□□□□ -0.81
PTP4A1-201ENST00000370651 ADGRG4Q8IZF6 3080 aa9.96□□□□□ -0.81
PTP4A1-201ENST00000370651 KRTAP10-2P60368 255 aa9.96□□□□□ -0.82
PTP4A1-201ENST00000370651 DMXL2Q8TDJ6 3036 aa9.95□□□□□ -0.82
PTP4A1-201ENST00000370651 ASH1LQ9NR48 2969 aaKnown RBP9.94□□□□□ -0.82
PTP4A1-201ENST00000370651 FLNCQ14315 2725 aa9.94□□□□□ -0.82
PTP4A1-201ENST00000370651 TACC2O95359 2948 aa9.94□□□□□ -0.82
PTP4A1-201ENST00000370651 ATMQ13315 3056 aa9.94□□□□□ -0.82
PTP4A1-201ENST00000370651 R4GN34 69 aa9.93□□□□□ -0.82
PTP4A1-201ENST00000370651 A8MU10 97 aa9.92□□□□□ -0.82
PTP4A1-201ENST00000370651 DNAH14Q0VDD8 3507 aa9.9□□□□□ -0.83
PTP4A1-201ENST00000370651 A0A0A0MQY5 61 aa9.87□□□□□ -0.83
PTP4A1-201ENST00000370651 LRBAP50851 2863 aa9.87□□□□□ -0.83
PTP4A1-201ENST00000370651 ITPR2Q14571 2701 aa9.86□□□□□ -0.83
PTP4A1-201ENST00000370651 COL6A3P12111 3177 aa9.86□□□□□ -0.83
PTP4A1-201ENST00000370651 APCP25054 2843 aa9.85□□□□□ -0.83
PTP4A1-201ENST00000370651 BOD1L1Q8NFC6 3051 aa9.85□□□□□ -0.83
PTP4A1-201ENST00000370651 FRYLO94915 3013 aa9.83□□□□□ -0.84
PTP4A1-201ENST00000370651 UTP20O75691 2785 aaKnown RBP9.83□□□□□ -0.84
PTP4A1-201ENST00000370651 COL12A1Q99715 3063 aa9.82□□□□□ -0.84
PTP4A1-201ENST00000370651 ADM2Q7Z4H4 148 aa9.81□□□□□ -0.84
PTP4A1-201ENST00000370651 KRTAP13-1Q8IUC0 172 aa9.8□□□□□ -0.84
PTP4A1-201ENST00000370651 KRTAP25-1Q3LHN0 102 aa9.78□□□□□ -0.84
PTP4A1-201ENST00000370651 Q6ZRN7 208 aaPredicted RBP9.78□□□□□ -0.84
PTP4A1-201ENST00000370651 M0QZ58 72 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms