RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 K7EQZ3 153 aa6.38□□□□□ -1.39
PRPF38B-203ENST00000370025 SERTAD4-AS1Q5TG53 156 aa6.38□□□□□ -1.39
PRPF38B-203ENST00000370025 CNBPP62633 177 aaKnown RBP6.38□□□□□ -1.39
PRPF38B-203ENST00000370025 SRRM2Q9UQ35 2752 aaKnown RBP6.37□□□□□ -1.39
PRPF38B-203ENST00000370025 C7orf33Q8WU49 177 aa6.37□□□□□ -1.39
PRPF38B-203ENST00000370025 PRR15LQ9BU68 103 aa6.37□□□□□ -1.39
PRPF38B-203ENST00000370025 DYNC2H1Q8NCM8 4307 aaKnown RBP6.37□□□□□ -1.39
PRPF38B-203ENST00000370025 IGLV5-37A0A075B6J1 123 aa6.36□□□□□ -1.39
PRPF38B-203ENST00000370025 Q1T7F1 81 aa6.36□□□□□ -1.39
PRPF38B-203ENST00000370025 LINC00208Q96KT6 92 aa6.36□□□□□ -1.39
PRPF38B-203ENST00000370025 PRLHP81277 87 aa6.36□□□□□ -1.39
PRPF38B-203ENST00000370025 DNAH1Q9P2D7 4330 aa6.36□□□□□ -1.39
PRPF38B-203ENST00000370025 KCNQ1DNQ9H478 68 aa6.35□□□□□ -1.39
PRPF38B-203ENST00000370025 H3BQ85 93 aa6.35□□□□□ -1.39
PRPF38B-203ENST00000370025 CSMD3Q7Z407 3707 aa6.35□□□□□ -1.39
PRPF38B-203ENST00000370025 C16orf90A8MZG2 172 aa6.34□□□□□ -1.39
PRPF38B-203ENST00000370025 CD164Q04900 197 aa6.34□□□□□ -1.39
PRPF38B-203ENST00000370025 MEGF8Q7Z7M0 2845 aa6.34□□□□□ -1.39
PRPF38B-203ENST00000370025 A6NED7 52 aa6.34□□□□□ -1.39
PRPF38B-203ENST00000370025 PRKDCP78527 4128 aaKnown RBP6.34□□□□□ -1.39
PRPF38B-203ENST00000370025 LINC00528Q8N1L1 170 aa6.34□□□□□ -1.4
PRPF38B-203ENST00000370025 Q8N377 158 aa6.34□□□□□ -1.4
PRPF38B-203ENST00000370025 DNHD1Q96M86 4753 aa6.33□□□□□ -1.4
PRPF38B-203ENST00000370025 A0A1W2PNM2 257 aa6.33□□□□□ -1.4
PRPF38B-203ENST00000370025 C1orf137Q5JT78 98 aa6.33□□□□□ -1.4
PRPF38B-203ENST00000370025 RBM12B-AS1Q9P1G2 102 aa6.33□□□□□ -1.4
PRPF38B-203ENST00000370025 Q6ZRN7 208 aaPredicted RBP6.33□□□□□ -1.4
PRPF38B-203ENST00000370025 IGLV1-50A0A075B6I6 118 aa6.32□□□□□ -1.4
PRPF38B-203ENST00000370025 Q5VV11 94 aa6.32□□□□□ -1.4
PRPF38B-203ENST00000370025 HCG22E2RYF7 251 aa6.32□□□□□ -1.4
PRPF38B-203ENST00000370025 RPL37AP61513 92 aaKnown RBP6.31□□□□□ -1.4
PRPF38B-203ENST00000370025 KRTAP7-1Q8IUC3 87 aa6.31□□□□□ -1.4
PRPF38B-203ENST00000370025 C9orf163Q8N9P6 203 aa6.31□□□□□ -1.4
PRPF38B-203ENST00000370025 PLECQ15149 4684 aaKnown RBP6.31□□□□□ -1.4
PRPF38B-203ENST00000370025 DSCR10P59022 87 aa6.3□□□□□ -1.4
PRPF38B-203ENST00000370025 LYSTQ99698 3801 aa6.29□□□□□ -1.4
PRPF38B-203ENST00000370025 WWC2-AS2Q96NR7 200 aa6.29□□□□□ -1.4
PRPF38B-203ENST00000370025 H0Y9J4 135 aa6.29□□□□□ -1.4
PRPF38B-203ENST00000370025 MP68P56378 58 aa6.29□□□□□ -1.4
PRPF38B-203ENST00000370025 Q6ZR54 194 aa6.29□□□□□ -1.4
PRPF38B-203ENST00000370025 DHRS4-AS1Q9P1J3 65 aa6.28□□□□□ -1.4
PRPF38B-203ENST00000370025 CHTF8P0CG12 524 aa6.28□□□□□ -1.4
PRPF38B-203ENST00000370025 SPRR1AP35321 89 aa6.28□□□□□ -1.4
PRPF38B-203ENST00000370025 A0A087WSZ3 146 aa6.28□□□□□ -1.4
PRPF38B-203ENST00000370025 NDUFS5O43920 106 aa6.28□□□□□ -1.4
PRPF38B-203ENST00000370025 LY6G6CO95867 125 aa6.28□□□□□ -1.4
PRPF38B-203ENST00000370025 Q6ZRX8 168 aa6.28□□□□□ -1.4
PRPF38B-203ENST00000370025 DNAH7Q8WXX0 4024 aa6.28□□□□□ -1.4
PRPF38B-203ENST00000370025 REG3GQ6UW15 175 aa6.27□□□□□ -1.41
PRPF38B-203ENST00000370025 A0A087WTM6 91 aa6.27□□□□□ -1.41
PRPF38B-203ENST00000370025 UBE2AP49459 152 aa6.27□□□□□ -1.41
PRPF38B-203ENST00000370025 KRTAP4-16G5E9R7 235 aaPredicted RBP6.27□□□□□ -1.41
PRPF38B-203ENST00000370025 KTN1-AS1Q86SY8 53 aa6.27□□□□□ -1.41
PRPF38B-203ENST00000370025 STARD9Q9P2P6 4700 aa6.26□□□□□ -1.41
PRPF38B-203ENST00000370025 C1orf134Q5TEV5 83 aa6.26□□□□□ -1.41
PRPF38B-203ENST00000370025 ZCCHC13Q8WW36 166 aaKnown RBP6.26□□□□□ -1.41
PRPF38B-203ENST00000370025 DNAH10Q8IVF4 4471 aa6.25□□□□□ -1.41
PRPF38B-203ENST00000370025 LCA10Q71F78 164 aa6.25□□□□□ -1.41
PRPF38B-203ENST00000370025 PCOTHQ58A44 107 aa6.25□□□□□ -1.41
PRPF38B-203ENST00000370025 IGLV9-49A0A0B4J1Y8 123 aa6.24□□□□□ -1.41
PRPF38B-203ENST00000370025 Q8N9P0 234 aaPredicted RBP6.24□□□□□ -1.41
PRPF38B-203ENST00000370025 VPS13DQ5THJ4 4388 aa6.24□□□□□ -1.41
PRPF38B-203ENST00000370025 SPAG11AQ6PDA7 123 aa6.24□□□□□ -1.41
PRPF38B-203ENST00000370025 Q8NBF4 154 aa6.24□□□□□ -1.41
PRPF38B-203ENST00000370025 Q9BRP9 147 aa6.23□□□□□ -1.41
PRPF38B-203ENST00000370025 FBN3Q75N90 2809 aa6.23□□□□□ -1.41
PRPF38B-203ENST00000370025 H0Y9P7 68 aa6.23□□□□□ -1.41
PRPF38B-203ENST00000370025 LINC00476Q8WZB0 136 aa6.23□□□□□ -1.41
PRPF38B-203ENST00000370025 PHF5AQ7RTV0 110 aaKnown RBP6.22□□□□□ -1.41
PRPF38B-203ENST00000370025 IGLV5-48A0A075B6I7 105 aa6.22□□□□□ -1.41
PRPF38B-203ENST00000370025 RTL8CO15255 209 aa6.21□□□□□ -1.41
PRPF38B-203ENST00000370025 NDUFB1O75438 58 aa6.21□□□□□ -1.41
PRPF38B-203ENST00000370025 CYP4F30PQ9H0H9 118 aa6.21□□□□□ -1.42
PRPF38B-203ENST00000370025 SPINK6Q6UWN8 80 aa6.2□□□□□ -1.42
PRPF38B-203ENST00000370025 LCE6AA0A183 80 aa6.19□□□□□ -1.42
PRPF38B-203ENST00000370025 SPACA4Q8TDM5 124 aa6.19□□□□□ -1.42
PRPF38B-203ENST00000370025 LIMD2Q9BT23 127 aa6.19□□□□□ -1.42
PRPF38B-203ENST00000370025 IGLV5-52A0A0A0MRZ9 124 aa6.19□□□□□ -1.42
PRPF38B-203ENST00000370025 PANO1I0J062 215 aa6.19□□□□□ -1.42
PRPF38B-203ENST00000370025 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.18□□□□□ -1.42
PRPF38B-203ENST00000370025 COA5Q86WW8 74 aa6.18□□□□□ -1.42
PRPF38B-203ENST00000370025 PRAC1Q96KF2 57 aa6.17□□□□□ -1.42
PRPF38B-203ENST00000370025 CASC2Q6XLA1 102 aa6.17□□□□□ -1.42
PRPF38B-203ENST00000370025 TGP01266 2768 aa6.17□□□□□ -1.42
PRPF38B-203ENST00000370025 KRTAP11-1Q8IUC1 163 aa6.16□□□□□ -1.42
PRPF38B-203ENST00000370025 ATP11AUNQ6ZP68 121 aa6.16□□□□□ -1.42
PRPF38B-203ENST00000370025 TNP2Q05952 138 aa6.15□□□□□ -1.42
PRPF38B-203ENST00000370025 CDK2AP2O75956 126 aa6.14□□□□□ -1.43
PRPF38B-203ENST00000370025 IGFL1Q6UW32 110 aa6.14□□□□□ -1.43
PRPF38B-203ENST00000370025 SPINK7P58062 85 aa6.13□□□□□ -1.43
PRPF38B-203ENST00000370025 ANAPC11Q9NYG5 84 aa6.13□□□□□ -1.43
PRPF38B-203ENST00000370025 MOBPQ13875 183 aa6.13□□□□□ -1.43
PRPF38B-203ENST00000370025 SPRR4Q96PI1 79 aa6.13□□□□□ -1.43
PRPF38B-203ENST00000370025 A6NN06 94 aa6.12□□□□□ -1.43
PRPF38B-203ENST00000370025 C4orf48Q5BLP8 95 aa6.12□□□□□ -1.43
PRPF38B-203ENST00000370025 RETNLBQ9BQ08 111 aa6.12□□□□□ -1.43
PRPF38B-203ENST00000370025 KMT2AQ03164 3969 aa6.12□□□□□ -1.43
PRPF38B-203ENST00000370025 PLAC8Q9NZF1 115 aa6.12□□□□□ -1.43
PRPF38B-203ENST00000370025 LOC101927531A0A1B0GV80 90 aa6.11□□□□□ -1.43
PRPF38B-203ENST00000370025 ADM2Q7Z4H4 148 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms