RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 KRTAP7-1Q8IUC3 87 aa5.5□□□□□ -1.53
TPM3-213ENST00000368545 LINC00167Q96N53 147 aa5.5□□□□□ -1.53
TPM3-213ENST00000368545 KRTAP4-8Q9BYQ9 185 aa5.5□□□□□ -1.53
TPM3-213ENST00000368545 DNAH2Q9P225 4427 aa5.5□□□□□ -1.53
TPM3-213ENST00000368545 FRAS1Q86XX4 4008 aa5.49□□□□□ -1.53
TPM3-213ENST00000368545 hADV29S1A0JD25 119 aa5.49□□□□□ -1.53
TPM3-213ENST00000368545 ORMDL1Q9P0S3 153 aa5.49□□□□□ -1.53
TPM3-213ENST00000368545 J3QR89 54 aa5.48□□□□□ -1.53
TPM3-213ENST00000368545 Q8N9P0 234 aaPredicted RBP5.48□□□□□ -1.53
TPM3-213ENST00000368545 H3BQ85 93 aa5.48□□□□□ -1.53
TPM3-213ENST00000368545 BAALC-AS2P0C853 105 aa5.48□□□□□ -1.53
TPM3-213ENST00000368545 PPDPFLQ8WWR9 84 aa5.48□□□□□ -1.53
TPM3-213ENST00000368545 CHTF8P0CG12 524 aa5.47□□□□□ -1.53
TPM3-213ENST00000368545 SPRR1AP35321 89 aa5.47□□□□□ -1.53
TPM3-213ENST00000368545 SPACA4Q8TDM5 124 aa5.47□□□□□ -1.53
TPM3-213ENST00000368545 A0A1W2PNN7 141 aa5.47□□□□□ -1.53
TPM3-213ENST00000368545 UBR4Q5T4S7 5183 aa5.47□□□□□ -1.53
TPM3-213ENST00000368545 ETDCA0A1B0GVM5 59 aa5.46□□□□□ -1.54
TPM3-213ENST00000368545 TMEM256-PLSCR3K7ERE1 68 aa5.46□□□□□ -1.54
TPM3-213ENST00000368545 V9GYY9 64 aa5.46□□□□□ -1.54
TPM3-213ENST00000368545 CXCL6P80162 114 aa5.45□□□□□ -1.54
TPM3-213ENST00000368545 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.45□□□□□ -1.54
TPM3-213ENST00000368545 Q8N377 158 aa5.45□□□□□ -1.54
TPM3-213ENST00000368545 KRTAP4-16G5E9R7 235 aaPredicted RBP5.45□□□□□ -1.54
TPM3-213ENST00000368545 Q6ZRX8 168 aa5.45□□□□□ -1.54
TPM3-213ENST00000368545 KRTAP9-2Q9BYQ4 174 aa5.45□□□□□ -1.54
TPM3-213ENST00000368545 HSPG2P98160 4391 aa5.44□□□□□ -1.54
TPM3-213ENST00000368545 UBE2BP63146 152 aa5.44□□□□□ -1.54
TPM3-213ENST00000368545 TEX49A0A1B0GTD5 131 aa5.44□□□□□ -1.54
TPM3-213ENST00000368545 PRR4Q16378 134 aa5.44□□□□□ -1.54
TPM3-213ENST00000368545 Q6ZQY7 126 aa5.44□□□□□ -1.54
TPM3-213ENST00000368545 DPH3Q96FX2 82 aa5.44□□□□□ -1.54
TPM3-213ENST00000368545 FAT2Q9NYQ8 4349 aa5.43□□□□□ -1.54
TPM3-213ENST00000368545 A0A0U1RQV1 116 aa5.43□□□□□ -1.54
TPM3-213ENST00000368545 HERC1Q15751 4861 aa5.43□□□□□ -1.54
TPM3-213ENST00000368545 PANO1I0J062 215 aa5.42□□□□□ -1.54
TPM3-213ENST00000368545 PHF5AQ7RTV0 110 aaKnown RBP5.42□□□□□ -1.54
TPM3-213ENST00000368545 ANAPC13Q9BS18 74 aa5.42□□□□□ -1.54
TPM3-213ENST00000368545 JMJD7-PLA2G4BH0Y9G9 81 aa5.42□□□□□ -1.54
TPM3-213ENST00000368545 CCDC179H3BU77 68 aa5.42□□□□□ -1.54
TPM3-213ENST00000368545 C4orf26Q17RF5 130 aa5.41□□□□□ -1.54
TPM3-213ENST00000368545 FUSP35637 526 aaKnown RBP eCLIP5.41□□□□□ -1.54
TPM3-213ENST00000368545 OBSCN-AS1Q96MR7 158 aa5.41□□□□□ -1.54
TPM3-213ENST00000368545 PLAC8Q9NZF1 115 aa5.41□□□□□ -1.54
TPM3-213ENST00000368545 H0Y9J4 135 aa5.4□□□□□ -1.54
TPM3-213ENST00000368545 FAM19A1Q7Z5A9 133 aa5.4□□□□□ -1.54
TPM3-213ENST00000368545 Q9BRP9 147 aa5.4□□□□□ -1.54
TPM3-213ENST00000368545 FAM240AA0A1B0GVK7 77 aa5.38□□□□□ -1.55
TPM3-213ENST00000368545 LAMTOR3Q9UHA4 124 aa5.38□□□□□ -1.55
TPM3-213ENST00000368545 IGLV8-61A0A075B6I0 122 aa5.38□□□□□ -1.55
TPM3-213ENST00000368545 BCE1O60756 84 aa5.38□□□□□ -1.55
TPM3-213ENST00000368545 SMCR5Q8TEV8 140 aa5.37□□□□□ -1.55
TPM3-213ENST00000368545 DNAH5Q8TE73 4624 aa5.37□□□□□ -1.55
TPM3-213ENST00000368545 UBE2AP49459 152 aa5.36□□□□□ -1.55
TPM3-213ENST00000368545 PRLHP81277 87 aa5.36□□□□□ -1.55
TPM3-213ENST00000368545 KRTAP11-1Q8IUC1 163 aa5.36□□□□□ -1.55
TPM3-213ENST00000368545 C14orf132Q9NPU4 83 aa5.36□□□□□ -1.55
TPM3-213ENST00000368545 PRO0628Q9UI54 55 aa5.36□□□□□ -1.55
TPM3-213ENST00000368545 IGLV5-48A0A075B6I7 105 aa5.36□□□□□ -1.55
TPM3-213ENST00000368545 ACYP1P07311 99 aa5.36□□□□□ -1.55
TPM3-213ENST00000368545 RBM3P98179 157 aaKnown RBP5.36□□□□□ -1.55
TPM3-213ENST00000368545 Q6ZSA8 131 aa5.36□□□□□ -1.55
TPM3-213ENST00000368545 PKD1P98161 4303 aa5.35□□□□□ -1.55
TPM3-213ENST00000368545 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.35□□□□□ -1.55
TPM3-213ENST00000368545 PDE6GP18545 87 aa5.35□□□□□ -1.55
TPM3-213ENST00000368545 DSCR8Q96T75 97 aa5.35□□□□□ -1.55
TPM3-213ENST00000368545 ERC2-IT1O76042 136 aa5.34□□□□□ -1.55
TPM3-213ENST00000368545 MT-ATP8P03928 68 aa5.34□□□□□ -1.55
TPM3-213ENST00000368545 HIGD2AQ9BW72 106 aa5.34□□□□□ -1.55
TPM3-213ENST00000368545 PKHD1P08F94 4074 aa5.34□□□□□ -1.56
TPM3-213ENST00000368545 LOC110117498A0A087WWA1 95 aa5.33□□□□□ -1.56
TPM3-213ENST00000368545 NDUFAF8A1L188 74 aa5.33□□□□□ -1.56
TPM3-213ENST00000368545 KRTAP13-1Q8IUC0 172 aa5.33□□□□□ -1.56
TPM3-213ENST00000368545 DEFB105AQ8NG35 78 aa5.33□□□□□ -1.56
TPM3-213ENST00000368545 J3KT08 172 aa5.33□□□□□ -1.56
TPM3-213ENST00000368545 KRTAP10-1P60331 282 aa5.33□□□□□ -1.56
TPM3-213ENST00000368545 ST20-AS1Q8NBB2 130 aa5.33□□□□□ -1.56
TPM3-213ENST00000368545 PSORS1C2Q9UIG4 136 aa5.33□□□□□ -1.56
TPM3-213ENST00000368545 DNAH8Q96JB1 4490 aa5.33□□□□□ -1.56
TPM3-213ENST00000368545 CCKP06307 115 aa5.32□□□□□ -1.56
TPM3-213ENST00000368545 CIRBP-AS1Q8TBR5 109 aa5.32□□□□□ -1.56
TPM3-213ENST00000368545 VPS13BQ7Z7G8 4022 aa5.32□□□□□ -1.56
TPM3-213ENST00000368545 Q6ZQT0 140 aa5.32□□□□□ -1.56
TPM3-213ENST00000368545 SCXQ7RTU7 201 aa5.32□□□□□ -1.56
TPM3-213ENST00000368545 TRBV7-4A0A0J9YYF1 115 aa5.31□□□□□ -1.56
TPM3-213ENST00000368545 RPS28P62857 69 aaKnown RBP5.31□□□□□ -1.56
TPM3-213ENST00000368545 HRCT1Q6UXD1 115 aa5.31□□□□□ -1.56
TPM3-213ENST00000368545 C1orf137Q5JT78 98 aa5.3□□□□□ -1.56
TPM3-213ENST00000368545 F8WEM9 126 aa5.3□□□□□ -1.56
TPM3-213ENST00000368545 SPRR1BP22528 89 aa5.3□□□□□ -1.56
TPM3-213ENST00000368545 Q5XG85 94 aa5.3□□□□□ -1.56
TPM3-213ENST00000368545 LRP1BQ9NZR2 4599 aa5.3□□□□□ -1.56
TPM3-213ENST00000368545 LCE3BQ5TA77 95 aa5.29□□□□□ -1.56
TPM3-213ENST00000368545 ZNF706Q9Y5V0 76 aaPredicted RBP5.29□□□□□ -1.56
TPM3-213ENST00000368545 ZNF861PO60384 105 aa5.29□□□□□ -1.56
TPM3-213ENST00000368545 C1orf195Q5TG92 126 aa5.28□□□□□ -1.56
TPM3-213ENST00000368545 C3orf22Q8N5N4 141 aa5.28□□□□□ -1.56
TPM3-213ENST00000368545 FAM236DA0A1B0GTK5 79 aa5.27□□□□□ -1.57
TPM3-213ENST00000368545 IGLV7-43P04211 117 aa5.27□□□□□ -1.57
TPM3-213ENST00000368545 FAM236CP0DP71 79 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms