RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 C9orf163Q8N9P6 203 aa5.41□□□□□ -1.54
PTPRK-206ENST00000368215 RETNLBQ9BQ08 111 aa5.41□□□□□ -1.54
PTPRK-206ENST00000368215 TENM1Q9UKZ4 2725 aa5.39□□□□□ -1.55
PTPRK-206ENST00000368215 RPS28P62857 69 aaKnown RBP5.39□□□□□ -1.55
PTPRK-206ENST00000368215 C1orf64Q8NEQ6 169 aa5.39□□□□□ -1.55
PTPRK-206ENST00000368215 VWFP04275 2813 aa5.39□□□□□ -1.55
PTPRK-206ENST00000368215 ANAPC11Q9NYG5 84 aa5.38□□□□□ -1.55
PTPRK-206ENST00000368215 IGLV5-48A0A075B6I7 105 aa5.38□□□□□ -1.55
PTPRK-206ENST00000368215 PSPHP1O15172 72 aa5.38□□□□□ -1.55
PTPRK-206ENST00000368215 CNBPP62633 177 aaKnown RBP5.38□□□□□ -1.55
PTPRK-206ENST00000368215 hDV103S1A0JD37 113 aa5.37□□□□□ -1.55
PTPRK-206ENST00000368215 KRTAP1-5Q9BYS1 174 aa5.37□□□□□ -1.55
PTPRK-206ENST00000368215 CYSTM1Q9H1C7 97 aa5.37□□□□□ -1.55
PTPRK-206ENST00000368215 IGLV5-37A0A075B6J1 123 aa5.37□□□□□ -1.55
PTPRK-206ENST00000368215 H7BZZ5 65 aa5.37□□□□□ -1.55
PTPRK-206ENST00000368215 SPTSSBQ8NFR3 76 aa5.37□□□□□ -1.55
PTPRK-206ENST00000368215 A0A087WTM6 91 aa5.36□□□□□ -1.55
PTPRK-206ENST00000368215 KLKP1Q107X0 134 aa5.36□□□□□ -1.55
PTPRK-206ENST00000368215 PDZD2O15018 2839 aa5.36□□□□□ -1.55
PTPRK-206ENST00000368215 OTOGQ6ZRI0 2925 aa5.35□□□□□ -1.55
PTPRK-206ENST00000368215 TENM3Q9P273 2699 aa5.34□□□□□ -1.56
PTPRK-206ENST00000368215 A8MWP4 228 aa5.33□□□□□ -1.56
PTPRK-206ENST00000368215 VPS13CQ709C8 3753 aa5.32□□□□□ -1.56
PTPRK-206ENST00000368215 PSORS1C2Q9UIG4 136 aa5.32□□□□□ -1.56
PTPRK-206ENST00000368215 SPRR1AP35321 89 aa5.32□□□□□ -1.56
PTPRK-206ENST00000368215 PRR15LQ9BU68 103 aa5.32□□□□□ -1.56
PTPRK-206ENST00000368215 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.32□□□□□ -1.56
PTPRK-206ENST00000368215 V9GYY9 64 aa5.32□□□□□ -1.56
PTPRK-206ENST00000368215 TRAV22A0A0B4J277 110 aa5.31□□□□□ -1.56
PTPRK-206ENST00000368215 A6NED7 52 aa5.31□□□□□ -1.56
PTPRK-206ENST00000368215 PRR15Q8IV56 129 aa5.31□□□□□ -1.56
PTPRK-206ENST00000368215 SPACA4Q8TDM5 124 aa5.31□□□□□ -1.56
PTPRK-206ENST00000368215 DSCR10P59022 87 aa5.3□□□□□ -1.56
PTPRK-206ENST00000368215 FBN1P35555 2871 aaKnown RBP5.3□□□□□ -1.56
PTPRK-206ENST00000368215 ZNF861PO60384 105 aa5.29□□□□□ -1.56
PTPRK-206ENST00000368215 SPRR4Q96PI1 79 aa5.29□□□□□ -1.56
PTPRK-206ENST00000368215 OCR1Q9BZK8 76 aa5.29□□□□□ -1.56
PTPRK-206ENST00000368215 ZFHX3Q15911 3703 aa5.29□□□□□ -1.56
PTPRK-206ENST00000368215 TP53AIP1Q9HCN2 124 aa5.27□□□□□ -1.57
PTPRK-206ENST00000368215 WWC2-AS2Q96NR7 200 aa5.27□□□□□ -1.57
PTPRK-206ENST00000368215 IGKV2D-30A0A075B6S6 120 aa5.26□□□□□ -1.57
PTPRK-206ENST00000368215 IGKV2-30P06310 120 aa5.26□□□□□ -1.57
PTPRK-206ENST00000368215 C8orf17Q9NRJ1 99 aa5.26□□□□□ -1.57
PTPRK-206ENST00000368215 TNP2Q05952 138 aa5.25□□□□□ -1.57
PTPRK-206ENST00000368215 SVIPQ8NHG7 77 aa5.24□□□□□ -1.57
PTPRK-206ENST00000368215 KRTAP4-16G5E9R7 235 aaPredicted RBP5.24□□□□□ -1.57
PTPRK-206ENST00000368215 MRPL34Q9BQ48 92 aaKnown RBP5.24□□□□□ -1.57
PTPRK-206ENST00000368215 H3BPC8 53 aa5.24□□□□□ -1.57
PTPRK-206ENST00000368215 PANO1I0J062 215 aa5.23□□□□□ -1.57
PTPRK-206ENST00000368215 SPINK1P00995 79 aa5.23□□□□□ -1.57
PTPRK-206ENST00000368215 IGLV7-43P04211 117 aa5.23□□□□□ -1.57
PTPRK-206ENST00000368215 LIMD2Q9BT23 127 aa5.23□□□□□ -1.57
PTPRK-206ENST00000368215 LINC00313P59037 77 aa5.23□□□□□ -1.57
PTPRK-206ENST00000368215 A0A1B0GVX0 72 aa5.23□□□□□ -1.57
PTPRK-206ENST00000368215 SPAG11AQ6PDA7 123 aa5.23□□□□□ -1.57
PTPRK-206ENST00000368215 SEC61GP60059 68 aa5.22□□□□□ -1.57
PTPRK-206ENST00000368215 KRTAP7-1Q8IUC3 87 aa5.22□□□□□ -1.57
PTPRK-206ENST00000368215 C1orf195Q5TG92 126 aa5.22□□□□□ -1.57
PTPRK-206ENST00000368215 TYMSOSQ8TAI1 123 aa5.22□□□□□ -1.57
PTPRK-206ENST00000368215 PLA2G1BP04054 148 aaKnown RBP5.21□□□□□ -1.57
PTPRK-206ENST00000368215 PRO0628Q9UI54 55 aa5.21□□□□□ -1.58
PTPRK-206ENST00000368215 A8MUN3 132 aa5.2□□□□□ -1.58
PTPRK-206ENST00000368215 LINC00336Q6ZUF6 198 aa5.2□□□□□ -1.58
PTPRK-206ENST00000368215 PKD1L1Q8TDX9 2849 aa5.2□□□□□ -1.58
PTPRK-206ENST00000368215 PMAIP1Q13794 54 aa5.2□□□□□ -1.58
PTPRK-206ENST00000368215 SMR3BP02814 79 aaPredicted RBP5.19□□□□□ -1.58
PTPRK-206ENST00000368215 KRTAP11-1Q8IUC1 163 aa5.19□□□□□ -1.58
PTPRK-206ENST00000368215 COA5Q86WW8 74 aa5.18□□□□□ -1.58
PTPRK-206ENST00000368215 OXTP01178 125 aa5.18□□□□□ -1.58
PTPRK-206ENST00000368215 SSBP3-AS1Q7Z2R9 100 aa5.18□□□□□ -1.58
PTPRK-206ENST00000368215 TRRAPQ9Y4A5 3859 aa5.18□□□□□ -1.58
PTPRK-206ENST00000368215 ANK3Q12955 4377 aaKnown RBP5.17□□□□□ -1.58
PTPRK-206ENST00000368215 Q96NJ1 140 aa5.16□□□□□ -1.58
PTPRK-206ENST00000368215 IGLV8-61A0A075B6I0 122 aa5.16□□□□□ -1.58
PTPRK-206ENST00000368215 LOC101927531A0A1B0GV80 90 aa5.15□□□□□ -1.58
PTPRK-206ENST00000368215 SPRR1BP22528 89 aa5.15□□□□□ -1.58
PTPRK-206ENST00000368215 ACYP2P14621 99 aa5.15□□□□□ -1.59
PTPRK-206ENST00000368215 FAM229BQ4G0N7 80 aa5.15□□□□□ -1.59
PTPRK-206ENST00000368215 LINC00472Q9H8W2 130 aa5.15□□□□□ -1.59
PTPRK-206ENST00000368215 C7orf65Q6ZTY9 151 aa5.15□□□□□ -1.59
PTPRK-206ENST00000368215 C8orf87E5RJ46 101 aa5.14□□□□□ -1.59
PTPRK-206ENST00000368215 PLAC8Q9NZF1 115 aa5.14□□□□□ -1.59
PTPRK-206ENST00000368215 MMP24-AS1A0A0U1RRL7 71 aa5.14□□□□□ -1.59
PTPRK-206ENST00000368215 ZNF469Q96JG9 3925 aaPredicted RBP5.13□□□□□ -1.59
PTPRK-206ENST00000368215 FAM229AH3BQW9 127 aa5.13□□□□□ -1.59
PTPRK-206ENST00000368215 Q5XG85 94 aa5.13□□□□□ -1.59
PTPRK-206ENST00000368215 FP248Q71RG6 208 aaPredicted RBP5.12□□□□□ -1.59
PTPRK-206ENST00000368215 KRTAP10-2P60368 255 aa5.1□□□□□ -1.59
PTPRK-206ENST00000368215 A0A1B0GU69 56 aa5.09□□□□□ -1.59
PTPRK-206ENST00000368215 Q6ZRN7 208 aaPredicted RBP5.09□□□□□ -1.59
PTPRK-206ENST00000368215 LINC00304Q8N9R0 145 aa5.09□□□□□ -1.59
PTPRK-206ENST00000368215 C9orf92A6NGG3 77 aa5.09□□□□□ -1.59
PTPRK-206ENST00000368215 SPANXA2-OT1Q8N9U9 137 aa5.09□□□□□ -1.6
PTPRK-206ENST00000368215 TENM2Q9NT68 2774 aa5.08□□□□□ -1.6
PTPRK-206ENST00000368215 Q6ZR54 194 aa5.07□□□□□ -1.6
PTPRK-206ENST00000368215 PRR26Q8N8Z3 221 aa5.06□□□□□ -1.6
PTPRK-206ENST00000368215 CYP4F30PQ9H0H9 118 aa5.06□□□□□ -1.6
PTPRK-206ENST00000368215 KRTAP10-1P60331 282 aa5.05□□□□□ -1.6
PTPRK-206ENST00000368215 KRTAP29-1A8MX34 341 aaPredicted RBP5.04□□□□□ -1.6
PTPRK-206ENST00000368215 IGLV7-46A0A075B6I9 117 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms