RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 UBR5O95071 2799 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-204ENST00000368210 A0A087WTM6 91 aa8.54□□□□□ -1.04
PTPRK-204ENST00000368210 CRIPTQ9P021 101 aa8.53□□□□□ -1.04
PTPRK-204ENST00000368210 FRYLO94915 3013 aa8.53□□□□□ -1.04
PTPRK-204ENST00000368210 A0A1W2PNN7 141 aa8.53□□□□□ -1.04
PTPRK-204ENST00000368210 FAM229AH3BQW9 127 aa8.53□□□□□ -1.04
PTPRK-204ENST00000368210 APLNQ9ULZ1 77 aa8.53□□□□□ -1.04
PTPRK-204ENST00000368210 ATMQ13315 3056 aa8.52□□□□□ -1.05
PTPRK-204ENST00000368210 A0A0G2JQZ4 141 aa8.52□□□□□ -1.05
PTPRK-204ENST00000368210 CNBPP62633 177 aaKnown RBP8.52□□□□□ -1.05
PTPRK-204ENST00000368210 BOD1L1Q8NFC6 3051 aa8.51□□□□□ -1.05
PTPRK-204ENST00000368210 ZNF861PO60384 105 aa8.5□□□□□ -1.05
PTPRK-204ENST00000368210 FREM2Q5SZK8 3169 aa8.5□□□□□ -1.05
PTPRK-204ENST00000368210 ADGRG4Q8IZF6 3080 aa8.5□□□□□ -1.05
PTPRK-204ENST00000368210 IGLV7-46A0A075B6I9 117 aa8.5□□□□□ -1.05
PTPRK-204ENST00000368210 NBEAL2Q6ZNJ1 2754 aa8.5□□□□□ -1.05
PTPRK-204ENST00000368210 A0A1W2PNM2 257 aa8.48□□□□□ -1.05
PTPRK-204ENST00000368210 C8orf17Q9NRJ1 99 aa8.48□□□□□ -1.05
PTPRK-204ENST00000368210 PLA2G1BP04054 148 aaKnown RBP8.47□□□□□ -1.05
PTPRK-204ENST00000368210 KALRNO60229 2985 aa8.47□□□□□ -1.05
PTPRK-204ENST00000368210 IGLV5-48A0A075B6I7 105 aa8.46□□□□□ -1.05
PTPRK-204ENST00000368210 IGLV5-37A0A075B6J1 123 aa8.46□□□□□ -1.06
PTPRK-204ENST00000368210 NBEAL1Q6ZS30 2694 aa8.46□□□□□ -1.06
PTPRK-204ENST00000368210 COL12A1Q99715 3063 aa8.45□□□□□ -1.06
PTPRK-204ENST00000368210 PRR26Q8N8Z3 221 aa8.44□□□□□ -1.06
PTPRK-204ENST00000368210 DMXL2Q8TDJ6 3036 aa8.43□□□□□ -1.06
PTPRK-204ENST00000368210 COL6A3P12111 3177 aa8.43□□□□□ -1.06
PTPRK-204ENST00000368210 PSORS1C2Q9UIG4 136 aa8.43□□□□□ -1.06
PTPRK-204ENST00000368210 CSAG1Q6PB30 78 aa8.43□□□□□ -1.06
PTPRK-204ENST00000368210 TACC2O95359 2948 aa8.42□□□□□ -1.06
PTPRK-204ENST00000368210 ASB16-AS1Q495Z4 193 aa8.42□□□□□ -1.06
PTPRK-204ENST00000368210 ANAPC11Q9NYG5 84 aa8.42□□□□□ -1.06
PTPRK-204ENST00000368210 ITPR1Q14643 2758 aa8.42□□□□□ -1.06
PTPRK-204ENST00000368210 Q96NJ1 140 aa8.41□□□□□ -1.06
PTPRK-204ENST00000368210 DSCR10P59022 87 aa8.41□□□□□ -1.06
PTPRK-204ENST00000368210 A0A1B0GVX0 72 aa8.4□□□□□ -1.06
PTPRK-204ENST00000368210 SPRR4Q96PI1 79 aa8.4□□□□□ -1.06
PTPRK-204ENST00000368210 IGLV7-43P04211 117 aa8.39□□□□□ -1.07
PTPRK-204ENST00000368210 SPINK7P58062 85 aa8.37□□□□□ -1.07
PTPRK-204ENST00000368210 Q8NDZ9 215 aa8.37□□□□□ -1.07
PTPRK-204ENST00000368210 LRBAP50851 2863 aa8.34□□□□□ -1.07
PTPRK-204ENST00000368210 DMAC1Q96GE9 116 aa8.34□□□□□ -1.08
PTPRK-204ENST00000368210 LINC00304Q8N9R0 145 aa8.32□□□□□ -1.08
PTPRK-204ENST00000368210 NSD1Q96L73 2696 aaPredicted RBP8.31□□□□□ -1.08
PTPRK-204ENST00000368210 BAHCC1Q9P281 2608 aa8.3□□□□□ -1.08
PTPRK-204ENST00000368210 A6NN06 94 aa8.3□□□□□ -1.08
PTPRK-204ENST00000368210 SPEGQ15772 3267 aa8.3□□□□□ -1.08
PTPRK-204ENST00000368210 SMR3BP02814 79 aaPredicted RBP8.3□□□□□ -1.08
PTPRK-204ENST00000368210 LUZP6Q538Z0 58 aa8.3□□□□□ -1.08
PTPRK-204ENST00000368210 ZZEF1O43149 2961 aa8.29□□□□□ -1.08
PTPRK-204ENST00000368210 ITPR2Q14571 2701 aa8.29□□□□□ -1.08
PTPRK-204ENST00000368210 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.28□□□□□ -1.08
PTPRK-204ENST00000368210 TNP2Q05952 138 aa8.28□□□□□ -1.08
PTPRK-204ENST00000368210 SPRR1AP35321 89 aa8.26□□□□□ -1.09
PTPRK-204ENST00000368210 EYSQ5T1H1 3165 aa8.26□□□□□ -1.09
PTPRK-204ENST00000368210 HRES1P13985 223 aa8.25□□□□□ -1.09
PTPRK-204ENST00000368210 TNRC18O15417 2968 aaPredicted RBP8.25□□□□□ -1.09
PTPRK-204ENST00000368210 UTP20O75691 2785 aaKnown RBP8.25□□□□□ -1.09
PTPRK-204ENST00000368210 A0A0A0MQY5 61 aa8.25□□□□□ -1.09
PTPRK-204ENST00000368210 REV3LO60673 3130 aa8.25□□□□□ -1.09
PTPRK-204ENST00000368210 KRTAP26-1Q6PEX3 210 aa8.23□□□□□ -1.09
PTPRK-204ENST00000368210 CFAP47Q6ZTR5 3102 aa8.23□□□□□ -1.09
PTPRK-204ENST00000368210 C9orf92A6NGG3 77 aa8.2□□□□□ -1.1
PTPRK-204ENST00000368210 KRTAP16-1A8MUX0 517 aa8.2□□□□□ -1.1
PTPRK-204ENST00000368210 SPTBN5Q9NRC6 3674 aaKnown RBP8.2□□□□□ -1.1
PTPRK-204ENST00000368210 KRTAP1-5Q9BYS1 174 aa8.2□□□□□ -1.1
PTPRK-204ENST00000368210 DMXL1Q9Y485 3027 aa8.2□□□□□ -1.1
PTPRK-204ENST00000368210 STAB2Q8WWQ8 2551 aa8.18□□□□□ -1.1
PTPRK-204ENST00000368210 ASH1LQ9NR48 2969 aaKnown RBP8.18□□□□□ -1.1
PTPRK-204ENST00000368210 A0A1B0GU33 70 aa8.17□□□□□ -1.1
PTPRK-204ENST00000368210 ZCCHC13Q8WW36 166 aaKnown RBP8.17□□□□□ -1.1
PTPRK-204ENST00000368210 ZANQ9Y493 2812 aa8.17□□□□□ -1.1
PTPRK-204ENST00000368210 PLAC8Q9NZF1 115 aa8.15□□□□□ -1.11
PTPRK-204ENST00000368210 MMP24-AS1A0A0U1RRL7 71 aa8.14□□□□□ -1.11
PTPRK-204ENST00000368210 HIVEP1P15822 2718 aa8.14□□□□□ -1.11
PTPRK-204ENST00000368210 APCP25054 2843 aa8.13□□□□□ -1.11
PTPRK-204ENST00000368210 SPRR1BP22528 89 aa8.12□□□□□ -1.11
PTPRK-204ENST00000368210 LOC400499M0QZD8 3231 aa8.12□□□□□ -1.11
PTPRK-204ENST00000368210 NIPBLQ6KC79 2804 aaeCLIP8.1□□□□□ -1.11
PTPRK-204ENST00000368210 J3QL48 77 aa8.09□□□□□ -1.11
PTPRK-204ENST00000368210 CELSR2Q9HCU4 2923 aa8.09□□□□□ -1.11
PTPRK-204ENST00000368210 A0A0D9SG42 100 aa8.07□□□□□ -1.12
PTPRK-204ENST00000368210 USP34Q70CQ2 3546 aa8.07□□□□□ -1.12
PTPRK-204ENST00000368210 Q8N1X5 172 aa8.06□□□□□ -1.12
PTPRK-204ENST00000368210 SPATA8Q6RVD6 105 aa8.05□□□□□ -1.12
PTPRK-204ENST00000368210 LINC00472Q9H8W2 130 aa8.05□□□□□ -1.12
PTPRK-204ENST00000368210 LCE6AA0A183 80 aa8.03□□□□□ -1.12
PTPRK-204ENST00000368210 A8MU10 97 aa8.03□□□□□ -1.12
PTPRK-204ENST00000368210 A0A087X002 238 aa8.02□□□□□ -1.13
PTPRK-204ENST00000368210 KRTAP4-16G5E9R7 235 aaPredicted RBP8.01□□□□□ -1.13
PTPRK-204ENST00000368210 HRNRQ86YZ3 2850 aaPredicted RBP8.01□□□□□ -1.13
PTPRK-204ENST00000368210 KMT2BQ9UMN6 2715 aaPredicted RBP8□□□□□ -1.13
PTPRK-204ENST00000368210 DCHS2Q6V1P9 2916 aa7.98□□□□□ -1.13
PTPRK-204ENST00000368210 KRTAP25-1Q3LHN0 102 aa7.98□□□□□ -1.13
PTPRK-204ENST00000368210 ADM2Q7Z4H4 148 aa7.98□□□□□ -1.13
PTPRK-204ENST00000368210 ROMO1P60602 79 aa7.97□□□□□ -1.13
PTPRK-204ENST00000368210 NF1P21359 2839 aa7.96□□□□□ -1.13
PTPRK-204ENST00000368210 PANO1I0J062 215 aa7.95□□□□□ -1.14
PTPRK-204ENST00000368210 KRTAP29-1A8MX34 341 aaPredicted RBP7.94□□□□□ -1.14
PTPRK-204ENST00000368210 COX6B2Q6YFQ2 88 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms