RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 IGLV7-43P04211 117 aa4.59□□□□□ -1.67
VTA1-202ENST00000367630 LINC00472Q9H8W2 130 aa4.59□□□□□ -1.68
VTA1-202ENST00000367630 GCN1Q92616 2671 aaKnown RBP4.59□□□□□ -1.68
VTA1-202ENST00000367630 ZCCHC13Q8WW36 166 aaKnown RBP4.58□□□□□ -1.68
VTA1-202ENST00000367630 SORL1Q92673 2214 aa4.58□□□□□ -1.68
VTA1-202ENST00000367630 LINC01558Q9Y6Z2 57 aa4.58□□□□□ -1.68
VTA1-202ENST00000367630 WWC2-AS2Q96NR7 200 aa4.58□□□□□ -1.68
VTA1-202ENST00000367630 FN1P02751 2386 aaKnown RBP4.58□□□□□ -1.68
VTA1-202ENST00000367630 SPINK1P00995 79 aa4.57□□□□□ -1.68
VTA1-202ENST00000367630 Q8NDZ9 215 aa4.57□□□□□ -1.68
VTA1-202ENST00000367630 LY6G6CO95867 125 aa4.57□□□□□ -1.68
VTA1-202ENST00000367630 SPINK6Q6UWN8 80 aa4.57□□□□□ -1.68
VTA1-202ENST00000367630 Q6ZR54 194 aa4.56□□□□□ -1.68
VTA1-202ENST00000367630 A0A1W2PNN7 141 aa4.56□□□□□ -1.68
VTA1-202ENST00000367630 MMP24-AS1A0A0U1RRL7 71 aa4.56□□□□□ -1.68
VTA1-202ENST00000367630 PSPHP1O15172 72 aa4.56□□□□□ -1.68
VTA1-202ENST00000367630 RPS29P62273 56 aaKnown RBP4.56□□□□□ -1.68
VTA1-202ENST00000367630 PCOTHQ58A44 107 aa4.56□□□□□ -1.68
VTA1-202ENST00000367630 KTN1-AS1Q86SY8 53 aa4.55□□□□□ -1.68
VTA1-202ENST00000367630 UQCR11O14957 56 aa4.54□□□□□ -1.68
VTA1-202ENST00000367630 LAMA5O15230 3695 aa4.54□□□□□ -1.68
VTA1-202ENST00000367630 ZANQ9Y493 2812 aa4.54□□□□□ -1.68
VTA1-202ENST00000367630 KRTAP29-1A8MX34 341 aaPredicted RBP4.54□□□□□ -1.68
VTA1-202ENST00000367630 RETNLBQ9BQ08 111 aa4.54□□□□□ -1.68
VTA1-202ENST00000367630 WNK1Q9H4A3 2382 aa4.54□□□□□ -1.68
VTA1-202ENST00000367630 FLNAP21333 2647 aaKnown RBP4.54□□□□□ -1.68
VTA1-202ENST00000367630 PRR4Q16378 134 aa4.53□□□□□ -1.68
VTA1-202ENST00000367630 C7orf65Q6ZTY9 151 aa4.53□□□□□ -1.68
VTA1-202ENST00000367630 ITPR3Q14573 2671 aa4.53□□□□□ -1.68
VTA1-202ENST00000367630 ASPMQ8IZT6 3477 aa4.53□□□□□ -1.68
VTA1-202ENST00000367630 ATRQ13535 2644 aa4.53□□□□□ -1.68
VTA1-202ENST00000367630 DEFB116Q30KQ4 102 aa4.51□□□□□ -1.69
VTA1-202ENST00000367630 TYMSOSQ8TAI1 123 aa4.51□□□□□ -1.69
VTA1-202ENST00000367630 WDFY3Q8IZQ1 3526 aa4.51□□□□□ -1.69
VTA1-202ENST00000367630 DCHS2Q6V1P9 2916 aa4.51□□□□□ -1.69
VTA1-202ENST00000367630 ASH1LQ9NR48 2969 aaKnown RBP4.51□□□□□ -1.69
VTA1-202ENST00000367630 PSORS1C2Q9UIG4 136 aa4.51□□□□□ -1.69
VTA1-202ENST00000367630 PLA2G1BP04054 148 aaKnown RBP4.5□□□□□ -1.69
VTA1-202ENST00000367630 C2CD3Q4AC94 2353 aa4.5□□□□□ -1.69
VTA1-202ENST00000367630 LRCOL1A6NCL2 159 aa4.5□□□□□ -1.69
VTA1-202ENST00000367630 FP248Q71RG6 208 aaPredicted RBP4.5□□□□□ -1.69
VTA1-202ENST00000367630 MAST4O15021 2626 aa4.49□□□□□ -1.69
VTA1-202ENST00000367630 CHTF8P0CG12 524 aa4.49□□□□□ -1.69
VTA1-202ENST00000367630 TEP1Q99973 2627 aaKnown RBP4.49□□□□□ -1.69
VTA1-202ENST00000367630 LRBAP50851 2863 aa4.49□□□□□ -1.69
VTA1-202ENST00000367630 CRYBG3Q68DQ2 2970 aa4.48□□□□□ -1.69
VTA1-202ENST00000367630 Q8N9P0 234 aaPredicted RBP4.48□□□□□ -1.69
VTA1-202ENST00000367630 LCA10Q71F78 164 aa4.48□□□□□ -1.69
VTA1-202ENST00000367630 HRNRQ86YZ3 2850 aaPredicted RBP4.47□□□□□ -1.69
VTA1-202ENST00000367630 CASC10Q5T4H9 136 aa4.47□□□□□ -1.69
VTA1-202ENST00000367630 F8P00451 2351 aa4.47□□□□□ -1.69
VTA1-202ENST00000367630 LINC00304Q8N9R0 145 aa4.47□□□□□ -1.69
VTA1-202ENST00000367630 UBR5O95071 2799 aaPredicted RBP4.47□□□□□ -1.69
VTA1-202ENST00000367630 TEX15Q9BXT5 2789 aa4.47□□□□□ -1.69
VTA1-202ENST00000367630 PRB2P02812 416 aaPredicted RBP4.46□□□□□ -1.69
VTA1-202ENST00000367630 ZFHX4Q86UP3 3567 aa4.46□□□□□ -1.69
VTA1-202ENST00000367630 APCP25054 2843 aa4.46□□□□□ -1.69
VTA1-202ENST00000367630 KRTAP13-1Q8IUC0 172 aa4.46□□□□□ -1.7
VTA1-202ENST00000367630 UTP20O75691 2785 aaKnown RBP4.45□□□□□ -1.7
VTA1-202ENST00000367630 NF1P21359 2839 aa4.45□□□□□ -1.7
VTA1-202ENST00000367630 CELSR2Q9HCU4 2923 aa4.45□□□□□ -1.7
VTA1-202ENST00000367630 MIR22HGQ0VDD5 57 aa4.45□□□□□ -1.7
VTA1-202ENST00000367630 DMAC1Q96GE9 116 aa4.45□□□□□ -1.7
VTA1-202ENST00000367630 RELNP78509 3460 aa4.44□□□□□ -1.7
VTA1-202ENST00000367630 CYSTM1Q9H1C7 97 aa4.44□□□□□ -1.7
VTA1-202ENST00000367630 IGKV2D-30A0A075B6S6 120 aa4.43□□□□□ -1.7
VTA1-202ENST00000367630 IGKV2-30P06310 120 aa4.43□□□□□ -1.7
VTA1-202ENST00000367630 KMT2BQ9UMN6 2715 aaPredicted RBP4.42□□□□□ -1.7
VTA1-202ENST00000367630 STAB1Q9NY15 2570 aa4.41□□□□□ -1.7
VTA1-202ENST00000367630 OXTP01178 125 aa4.41□□□□□ -1.7
VTA1-202ENST00000367630 Q5VV11 94 aa4.41□□□□□ -1.7
VTA1-202ENST00000367630 Q96NJ1 140 aa4.41□□□□□ -1.7
VTA1-202ENST00000367630 MXRA5Q9NR99 2828 aa4.4□□□□□ -1.7
VTA1-202ENST00000367630 Q6ZRN7 208 aaPredicted RBP4.39□□□□□ -1.71
VTA1-202ENST00000367630 KRTAP21-3Q3LHN1 58 aa4.39□□□□□ -1.71
VTA1-202ENST00000367630 NSD1Q96L73 2696 aaPredicted RBP4.39□□□□□ -1.71
VTA1-202ENST00000367630 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.38□□□□□ -1.71
VTA1-202ENST00000367630 PRR26Q8N8Z3 221 aa4.38□□□□□ -1.71
VTA1-202ENST00000367630 SETXQ7Z333 2677 aaKnown RBP4.38□□□□□ -1.71
VTA1-202ENST00000367630 SMG1Q96Q15 3661 aaKnown RBP4.38□□□□□ -1.71
VTA1-202ENST00000367630 HRES1P13985 223 aa4.37□□□□□ -1.71
VTA1-202ENST00000367630 COL6A5A8TX70 2615 aa4.37□□□□□ -1.71
VTA1-202ENST00000367630 BAHCC1Q9P281 2608 aa4.37□□□□□ -1.71
VTA1-202ENST00000367630 NBEAL1Q6ZS30 2694 aa4.37□□□□□ -1.71
VTA1-202ENST00000367630 RBM12B-AS1Q9P1G2 102 aa4.36□□□□□ -1.71
VTA1-202ENST00000367630 Q5W150 140 aa4.36□□□□□ -1.71
VTA1-202ENST00000367630 TENM4Q6N022 2769 aa4.36□□□□□ -1.71
VTA1-202ENST00000367630 KRTAP1-5Q9BYS1 174 aa4.35□□□□□ -1.71
VTA1-202ENST00000367630 HIVEP1P15822 2718 aa4.35□□□□□ -1.71
VTA1-202ENST00000367630 KRTAP7-1Q8IUC3 87 aa4.35□□□□□ -1.71
VTA1-202ENST00000367630 MGAM2Q2M2H8 2515 aa4.35□□□□□ -1.71
VTA1-202ENST00000367630 NIPBLQ6KC79 2804 aaeCLIP4.34□□□□□ -1.711e-6■■■■■ 35.4
VTA1-202ENST00000367630 NOTCH1P46531 2555 aa4.32□□□□□ -1.72
VTA1-202ENST00000367630 FBN2P35556 2912 aa4.31□□□□□ -1.72
VTA1-202ENST00000367630 SPATA8Q6RVD6 105 aa4.31□□□□□ -1.72
VTA1-202ENST00000367630 OTOGQ6ZRI0 2925 aa4.3□□□□□ -1.72
VTA1-202ENST00000367630 A0A0G2JQZ4 141 aa4.27□□□□□ -1.73
VTA1-202ENST00000367630 COX6B2Q6YFQ2 88 aa4.26□□□□□ -1.73
VTA1-202ENST00000367630 CELSR1Q9NYQ6 3014 aa4.25□□□□□ -1.73
VTA1-202ENST00000367630 A0A1B0GU33 70 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms