RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 Q6ZSA8 131 aa9.36□□□□□ -0.91
FBXO28-201ENST00000366862 DNAH12Q6ZR08 3092 aa9.33□□□□□ -0.92
FBXO28-201ENST00000366862 KRTAP25-1Q3LHN0 102 aa9.29□□□□□ -0.92
FBXO28-201ENST00000366862 EPG5Q9HCE0 2579 aa9.27□□□□□ -0.92
FBXO28-201ENST00000366862 FASNP49327 2511 aaKnown RBP9.27□□□□□ -0.92
FBXO28-201ENST00000366862 A0A087X002 238 aa9.25□□□□□ -0.93
FBXO28-201ENST00000366862 KRTAP16-1A8MUX0 517 aa9.25□□□□□ -0.93
FBXO28-201ENST00000366862 GOLGB1Q14789 3259 aaKnown RBP9.25□□□□□ -0.93
FBXO28-201ENST00000366862 KRTAP1-5Q9BYS1 174 aa9.25□□□□□ -0.93
FBXO28-201ENST00000366862 R4GN34 69 aa9.21□□□□□ -0.94
FBXO28-201ENST00000366862 USP24Q9UPU5 2620 aa9.18□□□□□ -0.94
FBXO28-201ENST00000366862 A8MU10 97 aa9.18□□□□□ -0.94
FBXO28-201ENST00000366862 ADM2Q7Z4H4 148 aa9.16□□□□□ -0.94
FBXO28-201ENST00000366862 NOTCH2NLQ7Z3S9 236 aa9.15□□□□□ -0.95
FBXO28-201ENST00000366862 PANO1I0J062 215 aa9.13□□□□□ -0.95
FBXO28-201ENST00000366862 FLNAP21333 2647 aaKnown RBP9.12□□□□□ -0.95
FBXO28-201ENST00000366862 MGAM2Q2M2H8 2515 aa9.07□□□□□ -0.96
FBXO28-201ENST00000366862 M0QZ58 72 aa9.05□□□□□ -0.96
FBXO28-201ENST00000366862 A0A0C4DFX4 3053 aa9.04□□□□□ -0.96
FBXO28-201ENST00000366862 CEP350Q5VT06 3117 aa9.04□□□□□ -0.96
FBXO28-201ENST00000366862 KRTAP7-1Q8IUC3 87 aa9.02□□□□□ -0.97
FBXO28-201ENST00000366862 ITPR3Q14573 2671 aa9.01□□□□□ -0.97
FBXO28-201ENST00000366862 ATRQ13535 2644 aa9□□□□□ -0.97
FBXO28-201ENST00000366862 CHD7Q9P2D1 2997 aa8.99□□□□□ -0.97
FBXO28-201ENST00000366862 NDUFAF8A1L188 74 aa8.98□□□□□ -0.97
FBXO28-201ENST00000366862 KRTAP11-1Q8IUC1 163 aa8.98□□□□□ -0.97
FBXO28-201ENST00000366862 KRTAP10-1P60331 282 aa8.95□□□□□ -0.98
FBXO28-201ENST00000366862 RPS29P62273 56 aaKnown RBP8.94□□□□□ -0.98
FBXO28-201ENST00000366862 HECTD1Q9ULT8 2610 aa8.93□□□□□ -0.98
FBXO28-201ENST00000366862 KRTAP13-1Q8IUC0 172 aa8.92□□□□□ -0.98
FBXO28-201ENST00000366862 SEC61BP60468 96 aaKnown RBP8.91□□□□□ -0.98
FBXO28-201ENST00000366862 KRTAP10-2P60368 255 aa8.91□□□□□ -0.98
FBXO28-201ENST00000366862 C5orf42Q9H799 3197 aa8.9□□□□□ -0.98
FBXO28-201ENST00000366862 A8MUU9 505 aa8.87□□□□□ -0.99
FBXO28-201ENST00000366862 CHD9Q3L8U1 2897 aa8.85□□□□□ -0.99
FBXO28-201ENST00000366862 CHD6Q8TD26 2715 aa8.85□□□□□ -0.99
FBXO28-201ENST00000366862 M0R2T5 61 aa8.84□□□□□ -0.99
FBXO28-201ENST00000366862 UNC79Q9P2D8 2635 aa8.84□□□□□ -0.99
FBXO28-201ENST00000366862 GCN1Q92616 2671 aaKnown RBP8.83□□□□□ -1
FBXO28-201ENST00000366862 AKAP13Q12802 2813 aa8.83□□□□□ -1
FBXO28-201ENST00000366862 CFAP54Q96N23 3096 aa8.82□□□□□ -1
FBXO28-201ENST00000366862 PLAC4Q8WY50 150 aa8.82□□□□□ -1
FBXO28-201ENST00000366862 NBEAL1Q6ZS30 2694 aa8.81□□□□□ -1
FBXO28-201ENST00000366862 Q6ZRN7 208 aaPredicted RBP8.78□□□□□ -1
FBXO28-201ENST00000366862 MAST4O15021 2626 aa8.77□□□□□ -1.01
FBXO28-201ENST00000366862 DMBT1Q9UGM3 2413 aaPredicted RBP8.77□□□□□ -1.01
FBXO28-201ENST00000366862 UTRNP46939 3433 aa8.76□□□□□ -1.01
FBXO28-201ENST00000366862 KRTAP13-2Q52LG2 175 aa8.75□□□□□ -1.01
FBXO28-201ENST00000366862 Q5VSD8 79 aa8.74□□□□□ -1.01
FBXO28-201ENST00000366862 CENPEQ02224 2701 aa8.72□□□□□ -1.01
FBXO28-201ENST00000366862 PCNTO95613 3336 aa8.72□□□□□ -1.01
FBXO28-201ENST00000366862 FLNBO75369 2602 aaKnown RBP8.71□□□□□ -1.01
FBXO28-201ENST00000366862 C20orf166-AS1Q96NR2 134 aa8.67□□□□□ -1.02
FBXO28-201ENST00000366862 FLG2Q5D862 2391 aaPredicted RBP8.67□□□□□ -1.02
FBXO28-201ENST00000366862 TRANK1O15050 2925 aa8.66□□□□□ -1.02
FBXO28-201ENST00000366862 CFAP46Q8IYW2 2715 aa8.64□□□□□ -1.03
FBXO28-201ENST00000366862 NBEAL2Q6ZNJ1 2754 aa8.64□□□□□ -1.03
FBXO28-201ENST00000366862 HELZ2Q9BYK8 2649 aaKnown RBP8.63□□□□□ -1.03
FBXO28-201ENST00000366862 MGAQ8IWI9 3026 aa8.61□□□□□ -1.03
FBXO28-201ENST00000366862 HTTP42858 3142 aa8.6□□□□□ -1.03
FBXO28-201ENST00000366862 H0YAA0 97 aa8.57□□□□□ -1.04
FBXO28-201ENST00000366862 STAB1Q9NY15 2570 aa8.57□□□□□ -1.04
FBXO28-201ENST00000366862 NOTCH1P46531 2555 aa8.57□□□□□ -1.04
FBXO28-201ENST00000366862 PP632Q6XCG6 107 aa8.52□□□□□ -1.05
FBXO28-201ENST00000366862 TEX15Q9BXT5 2789 aa8.51□□□□□ -1.05
FBXO28-201ENST00000366862 TNP1P09430 55 aa8.5□□□□□ -1.05
FBXO28-201ENST00000366862 C10orf95Q9H7T3 257 aa8.49□□□□□ -1.05
FBXO28-201ENST00000366862 FRYQ5TBA9 3013 aa8.47□□□□□ -1.05
FBXO28-201ENST00000366862 LAMA2P24043 3122 aaKnown RBP8.46□□□□□ -1.05
FBXO28-201ENST00000366862 ZNF292O60281 2723 aa8.46□□□□□ -1.06
FBXO28-201ENST00000366862 P0C880 135 aa8.45□□□□□ -1.06
FBXO28-201ENST00000366862 SETXQ7Z333 2677 aaKnown RBP8.45□□□□□ -1.06
FBXO28-201ENST00000366862 TRIOO75962 3097 aa8.44□□□□□ -1.06
FBXO28-201ENST00000366862 COL6A5A8TX70 2615 aa8.42□□□□□ -1.06
FBXO28-201ENST00000366862 TEP1Q99973 2627 aaKnown RBP8.42□□□□□ -1.06
FBXO28-201ENST00000366862 MKI67P46013 3256 aaKnown RBP8.41□□□□□ -1.06
FBXO28-201ENST00000366862 STAB2Q8WWQ8 2551 aa8.39□□□□□ -1.07
FBXO28-201ENST00000366862 BAHCC1Q9P281 2608 aa8.38□□□□□ -1.07
FBXO28-201ENST00000366862 ITPR1Q14643 2758 aa8.38□□□□□ -1.07
FBXO28-201ENST00000366862 KALRNO60229 2985 aa8.33□□□□□ -1.08
FBXO28-201ENST00000366862 RANBP2P49792 3224 aaKnown RBP8.33□□□□□ -1.08
FBXO28-201ENST00000366862 WDFY4Q6ZS81 3184 aa8.32□□□□□ -1.08
FBXO28-201ENST00000366862 DSPP15924 2871 aaKnown RBP8.3□□□□□ -1.08
FBXO28-201ENST00000366862 KRTAP1-4P0C5Y4 121 aa8.29□□□□□ -1.08
FBXO28-201ENST00000366862 NSD1Q96L73 2696 aaPredicted RBP8.28□□□□□ -1.08
FBXO28-201ENST00000366862 UBR5O95071 2799 aaPredicted RBP8.27□□□□□ -1.09
FBXO28-201ENST00000366862 KRTAP13-3Q3SY46 172 aa8.26□□□□□ -1.09
FBXO28-201ENST00000366862 APCP25054 2843 aa8.25□□□□□ -1.09
FBXO28-201ENST00000366862 FREM2Q5SZK8 3169 aa8.25□□□□□ -1.09
FBXO28-201ENST00000366862 VPS13AQ96RL7 3174 aa8.24□□□□□ -1.09
FBXO28-201ENST00000366862 NBEAQ8NFP9 2946 aa8.24□□□□□ -1.09
FBXO28-201ENST00000366862 MAP1AP78559 2803 aaPredicted RBP8.23□□□□□ -1.09
FBXO28-201ENST00000366862 LAMA3Q16787 3333 aa8.19□□□□□ -1.1
FBXO28-201ENST00000366862 IGSF10Q6WRI0 2623 aa8.17□□□□□ -1.1
FBXO28-201ENST00000366862 KMT2BQ9UMN6 2715 aaPredicted RBP8.17□□□□□ -1.1
FBXO28-201ENST00000366862 KRTAP10-8P60410 259 aa8.16□□□□□ -1.1
FBXO28-201ENST00000366862 XP32Q5T750 250 aa8.16□□□□□ -1.1
FBXO28-201ENST00000366862 ITPR2Q14571 2701 aa8.13□□□□□ -1.11
FBXO28-201ENST00000366862 UNC80Q8N2C7 3258 aa8.08□□□□□ -1.12
FBXO28-201ENST00000366862 PRUNE2Q8WUY3 3088 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms