RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 RPL37AP61513 92 aaKnown RBP12.59□□□□□ -0.39
TRIM58-201ENST00000366481 ZCCHC13Q8WW36 166 aaKnown RBP12.59□□□□□ -0.39
TRIM58-201ENST00000366481 LINC01556Q5JQF7 62 aa12.59□□□□□ -0.39
TRIM58-201ENST00000366481 A0A087WSZ3 146 aa12.58□□□□□ -0.4
TRIM58-201ENST00000366481 PRR15LQ9BU68 103 aa12.58□□□□□ -0.4
TRIM58-201ENST00000366481 LINC00476Q8WZB0 136 aa12.56□□□□□ -0.4
TRIM58-201ENST00000366481 CMYA5Q8N3K9 4069 aa12.56□□□□□ -0.4
TRIM58-201ENST00000366481 LCE6AA0A183 80 aa12.56□□□□□ -0.4
TRIM58-201ENST00000366481 A0A1B0GW54 56 aa12.56□□□□□ -0.4
TRIM58-201ENST00000366481 LINC00588Q9Y4M8 146 aa12.56□□□□□ -0.4
TRIM58-201ENST00000366481 DNAH10Q8IVF4 4471 aa12.55□□□□□ -0.4
TRIM58-201ENST00000366481 H3BNG1 76 aa12.54□□□□□ -0.4
TRIM58-201ENST00000366481 CYP4F30PQ9H0H9 118 aa12.53□□□□□ -0.4
TRIM58-201ENST00000366481 SPRR4Q96PI1 79 aa12.52□□□□□ -0.41
TRIM58-201ENST00000366481 H0Y9P7 68 aa12.52□□□□□ -0.41
TRIM58-201ENST00000366481 IGLV1-50A0A075B6I6 118 aa12.51□□□□□ -0.41
TRIM58-201ENST00000366481 TNP2Q05952 138 aa12.5□□□□□ -0.41
TRIM58-201ENST00000366481 IGKV2-24A0A0C4DH68 120 aa12.5□□□□□ -0.41
TRIM58-201ENST00000366481 A6NED7 52 aa12.5□□□□□ -0.41
TRIM58-201ENST00000366481 KRTAP7-1Q8IUC3 87 aa12.49□□□□□ -0.41
TRIM58-201ENST00000366481 UBE2AP49459 152 aa12.49□□□□□ -0.41
TRIM58-201ENST00000366481 Q5VV11 94 aa12.49□□□□□ -0.41
TRIM58-201ENST00000366481 MRPL55Q7Z7F7 128 aaKnown RBP12.49□□□□□ -0.41
TRIM58-201ENST00000366481 A0A096LNI7 61 aa12.48□□□□□ -0.41
TRIM58-201ENST00000366481 PRLHP81277 87 aa12.47□□□□□ -0.41
TRIM58-201ENST00000366481 IGFL1Q6UW32 110 aa12.47□□□□□ -0.41
TRIM58-201ENST00000366481 CASC2Q6XLA1 102 aa12.47□□□□□ -0.41
TRIM58-201ENST00000366481 DNAH10OSP0CZ25 163 aa12.46□□□□□ -0.41
TRIM58-201ENST00000366481 COL7A1Q02388 2944 aa12.45□□□□□ -0.42
TRIM58-201ENST00000366481 REG3GQ6UW15 175 aa12.44□□□□□ -0.42
TRIM58-201ENST00000366481 LIMD2Q9BT23 127 aa12.43□□□□□ -0.42
TRIM58-201ENST00000366481 H0Y9J4 135 aa12.42□□□□□ -0.42
TRIM58-201ENST00000366481 HUWE1Q7Z6Z7 4374 aaKnown RBP12.42□□□□□ -0.42
TRIM58-201ENST00000366481 KRTAP4-16G5E9R7 235 aaPredicted RBP12.42□□□□□ -0.42
TRIM58-201ENST00000366481 Q8N9P0 234 aaPredicted RBP12.41□□□□□ -0.42
TRIM58-201ENST00000366481 CD164Q04900 197 aa12.39□□□□□ -0.43
TRIM58-201ENST00000366481 PCOTHQ58A44 107 aa12.39□□□□□ -0.43
TRIM58-201ENST00000366481 C16orf90A8MZG2 172 aa12.39□□□□□ -0.43
TRIM58-201ENST00000366481 K7EIL1 84 aa12.39□□□□□ -0.43
TRIM58-201ENST00000366481 SPRR1AP35321 89 aa12.37□□□□□ -0.43
TRIM58-201ENST00000366481 MDFIQ99750 246 aa12.36□□□□□ -0.43
TRIM58-201ENST00000366481 TGP01266 2768 aa12.36□□□□□ -0.43
TRIM58-201ENST00000366481 KRTAP1-5Q9BYS1 174 aa12.35□□□□□ -0.43
TRIM58-201ENST00000366481 CHTF8P0CG12 524 aa12.33□□□□□ -0.44
TRIM58-201ENST00000366481 COA5Q86WW8 74 aa12.32□□□□□ -0.44
TRIM58-201ENST00000366481 PLA2G2DQ9UNK4 145 aa12.32□□□□□ -0.44
TRIM58-201ENST00000366481 DNAH9Q9NYC9 4486 aa12.31□□□□□ -0.44
TRIM58-201ENST00000366481 SPAG11AQ6PDA7 123 aa12.31□□□□□ -0.44
TRIM58-201ENST00000366481 DNAH1Q9P2D7 4330 aa12.31□□□□□ -0.44
TRIM58-201ENST00000366481 TLX1NBP0CAT3 122 aa12.31□□□□□ -0.44
TRIM58-201ENST00000366481 UBE2DNLQ8IWF7 75 aa12.31□□□□□ -0.44
TRIM58-201ENST00000366481 KTN1-AS1Q86SY8 53 aa12.3□□□□□ -0.44
TRIM58-201ENST00000366481 SPANXA2-OT1Q8N9U9 137 aa12.29□□□□□ -0.44
TRIM58-201ENST00000366481 DNAH3Q8TD57 4116 aa12.29□□□□□ -0.44
TRIM58-201ENST00000366481 NDUFS5O43920 106 aa12.28□□□□□ -0.44
TRIM58-201ENST00000366481 LCA10Q71F78 164 aa12.27□□□□□ -0.45
TRIM58-201ENST00000366481 CNBPP62633 177 aaKnown RBP12.26□□□□□ -0.45
TRIM58-201ENST00000366481 RBM12B-AS1Q9P1G2 102 aa12.26□□□□□ -0.45
TRIM58-201ENST00000366481 IGLV5-37A0A075B6J1 123 aa12.25□□□□□ -0.45
TRIM58-201ENST00000366481 KRTAP29-1A8MX34 341 aaPredicted RBP12.24□□□□□ -0.45
TRIM58-201ENST00000366481 H3BPC8 53 aa12.24□□□□□ -0.45
TRIM58-201ENST00000366481 ATP11AUNQ6ZP68 121 aa12.24□□□□□ -0.45
TRIM58-201ENST00000366481 KRTAP11-1Q8IUC1 163 aa12.23□□□□□ -0.45
TRIM58-201ENST00000366481 A8MWP4 228 aa12.23□□□□□ -0.45
TRIM58-201ENST00000366481 PHF5AQ7RTV0 110 aaKnown RBP12.22□□□□□ -0.45
TRIM58-201ENST00000366481 DNAH7Q8WXX0 4024 aa12.21□□□□□ -0.45
TRIM58-201ENST00000366481 LOC101927531A0A1B0GV80 90 aa12.18□□□□□ -0.46
TRIM58-201ENST00000366481 Q75L30 129 aa12.18□□□□□ -0.46
TRIM58-201ENST00000366481 C9orf163Q8N9P6 203 aa12.15□□□□□ -0.46
TRIM58-201ENST00000366481 IGLV7-46A0A075B6I9 117 aa12.12□□□□□ -0.47
TRIM58-201ENST00000366481 CDC42SE1Q9NRR8 79 aa12.11□□□□□ -0.47
TRIM58-201ENST00000366481 IGLV9-49A0A0B4J1Y8 123 aa12.11□□□□□ -0.47
TRIM58-201ENST00000366481 LINC00472Q9H8W2 130 aa12.1□□□□□ -0.47
TRIM58-201ENST00000366481 PLECQ15149 4684 aaKnown RBP12.09□□□□□ -0.47
TRIM58-201ENST00000366481 PANO1I0J062 215 aa12.09□□□□□ -0.47
TRIM58-201ENST00000366481 IGLV8-61A0A075B6I0 122 aa12.08□□□□□ -0.48
TRIM58-201ENST00000366481 IGHV6-1A0A0B4J1U7 121 aa12.07□□□□□ -0.48
TRIM58-201ENST00000366481 MMP24-AS1A0A0U1RRL7 71 aa12.07□□□□□ -0.48
TRIM58-201ENST00000366481 CDK2AP2O75956 126 aa12.06□□□□□ -0.48
TRIM58-201ENST00000366481 SPINK7P58062 85 aa12.06□□□□□ -0.48
TRIM58-201ENST00000366481 A6NN06 94 aa12.05□□□□□ -0.48
TRIM58-201ENST00000366481 MOBPQ13875 183 aa12.05□□□□□ -0.48
TRIM58-201ENST00000366481 C7orf65Q6ZTY9 151 aa12.03□□□□□ -0.48
TRIM58-201ENST00000366481 LINC01558Q9Y6Z2 57 aa11.99□□□□□ -0.49
TRIM58-201ENST00000366481 APLNQ9ULZ1 77 aa11.99□□□□□ -0.49
TRIM58-201ENST00000366481 MEGF8Q7Z7M0 2845 aa11.99□□□□□ -0.49
TRIM58-201ENST00000366481 TP53AIP1Q9HCN2 124 aa11.98□□□□□ -0.49
TRIM58-201ENST00000366481 PRR26Q8N8Z3 221 aa11.97□□□□□ -0.49
TRIM58-201ENST00000366481 HRES1P13985 223 aa11.96□□□□□ -0.49
TRIM58-201ENST00000366481 DNHD1Q96M86 4753 aa11.95□□□□□ -0.5
TRIM58-201ENST00000366481 C8orf17Q9NRJ1 99 aa11.95□□□□□ -0.5
TRIM58-201ENST00000366481 ANAPC11Q9NYG5 84 aa11.93□□□□□ -0.5
TRIM58-201ENST00000366481 SPINK6Q6UWN8 80 aa11.92□□□□□ -0.5
TRIM58-201ENST00000366481 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.91□□□□□ -0.5
TRIM58-201ENST00000366481 PRAC1Q96KF2 57 aa11.9□□□□□ -0.51
TRIM58-201ENST00000366481 FRAS1Q86XX4 4008 aa11.89□□□□□ -0.51
TRIM58-201ENST00000366481 STARD9Q9P2P6 4700 aa11.88□□□□□ -0.51
TRIM58-201ENST00000366481 PRKDCP78527 4128 aaKnown RBP11.88□□□□□ -0.51
TRIM58-201ENST00000366481 NBDYA0A0U1RRE5 68 aa11.88□□□□□ -0.51
TRIM58-201ENST00000366481 SPRR1BP22528 89 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms