RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 PRR4Q16378 134 aa5.99□□□□□ -1.45
GTF3C2-202ENST00000359541 NUPR2A6NF83 97 aa5.98□□□□□ -1.45
GTF3C2-202ENST00000359541 EPM2AB3EWF7 344 aa5.98□□□□□ -1.45
GTF3C2-202ENST00000359541 B9D2Q9BPU9 175 aa5.98□□□□□ -1.45
GTF3C2-202ENST00000359541 Q9BRP9 147 aa5.98□□□□□ -1.45
GTF3C2-202ENST00000359541 KRTAP4-16G5E9R7 235 aaPredicted RBP5.97□□□□□ -1.45
GTF3C2-202ENST00000359541 FP248Q71RG6 208 aaPredicted RBP5.97□□□□□ -1.45
GTF3C2-202ENST00000359541 TENM3Q9P273 2699 aa5.97□□□□□ -1.45
GTF3C2-202ENST00000359541 IGLV9-49A0A0B4J1Y8 123 aa5.97□□□□□ -1.45
GTF3C2-202ENST00000359541 Q8NBF4 154 aa5.97□□□□□ -1.45
GTF3C2-202ENST00000359541 TMEM254Q8TBM7 123 aa5.97□□□□□ -1.45
GTF3C2-202ENST00000359541 FLG2Q5D862 2391 aaPredicted RBP5.96□□□□□ -1.45
GTF3C2-202ENST00000359541 APLNQ9ULZ1 77 aa5.96□□□□□ -1.45
GTF3C2-202ENST00000359541 RBM12B-AS1Q9P1G2 102 aa5.96□□□□□ -1.46
GTF3C2-202ENST00000359541 ST20-AS1Q8NBB2 130 aa5.95□□□□□ -1.46
GTF3C2-202ENST00000359541 FBN1P35555 2871 aaKnown RBP5.95□□□□□ -1.46
GTF3C2-202ENST00000359541 ERC2-IT1O76042 136 aa5.94□□□□□ -1.46
GTF3C2-202ENST00000359541 NBDYA0A0U1RRE5 68 aa5.92□□□□□ -1.46
GTF3C2-202ENST00000359541 KRTAP1-5Q9BYS1 174 aa5.92□□□□□ -1.46
GTF3C2-202ENST00000359541 PRLHP81277 87 aa5.92□□□□□ -1.46
GTF3C2-202ENST00000359541 KRTAP7-1Q8IUC3 87 aa5.92□□□□□ -1.46
GTF3C2-202ENST00000359541 A0A1W2PNM2 257 aa5.91□□□□□ -1.46
GTF3C2-202ENST00000359541 IGKV4-1P06312 121 aa5.91□□□□□ -1.46
GTF3C2-202ENST00000359541 DEFB116Q30KQ4 102 aa5.91□□□□□ -1.46
GTF3C2-202ENST00000359541 KLKP1Q107X0 134 aa5.91□□□□□ -1.46
GTF3C2-202ENST00000359541 Q8N9L7 120 aa5.91□□□□□ -1.46
GTF3C2-202ENST00000359541 LINC00476Q8WZB0 136 aa5.91□□□□□ -1.46
GTF3C2-202ENST00000359541 SPRR4Q96PI1 79 aa5.91□□□□□ -1.46
GTF3C2-202ENST00000359541 A0A1W2PNN7 141 aa5.9□□□□□ -1.46
GTF3C2-202ENST00000359541 C9orf163Q8N9P6 203 aa5.9□□□□□ -1.46
GTF3C2-202ENST00000359541 FAM30AQ9NZY2 134 aa5.89□□□□□ -1.47
GTF3C2-202ENST00000359541 WFDC13Q8IUB5 93 aa5.89□□□□□ -1.47
GTF3C2-202ENST00000359541 FAM229BQ4G0N7 80 aa5.89□□□□□ -1.47
GTF3C2-202ENST00000359541 CHKB-CPT1BH3BT56 60 aa5.88□□□□□ -1.47
GTF3C2-202ENST00000359541 PHF5AQ7RTV0 110 aaKnown RBP5.88□□□□□ -1.47
GTF3C2-202ENST00000359541 IGLV5-52A0A0A0MRZ9 124 aa5.88□□□□□ -1.47
GTF3C2-202ENST00000359541 H7BZZ5 65 aa5.88□□□□□ -1.47
GTF3C2-202ENST00000359541 ZNF706Q9Y5V0 76 aaPredicted RBP5.88□□□□□ -1.47
GTF3C2-202ENST00000359541 SRRM2Q9UQ35 2752 aaKnown RBP5.87□□□□□ -1.47
GTF3C2-202ENST00000359541 CHTF8P0CG12 524 aa5.87□□□□□ -1.47
GTF3C2-202ENST00000359541 HCG22E2RYF7 251 aa5.86□□□□□ -1.47
GTF3C2-202ENST00000359541 IGFL1Q6UW32 110 aa5.86□□□□□ -1.47
GTF3C2-202ENST00000359541 SMIM29Q86T20 159 aa5.86□□□□□ -1.47
GTF3C2-202ENST00000359541 CIRBP-AS1Q8TBR5 109 aa5.86□□□□□ -1.47
GTF3C2-202ENST00000359541 IGLV8-61A0A075B6I0 122 aa5.85□□□□□ -1.47
GTF3C2-202ENST00000359541 C1orf134Q5TEV5 83 aa5.85□□□□□ -1.47
GTF3C2-202ENST00000359541 A0A087WSZ3 146 aa5.85□□□□□ -1.47
GTF3C2-202ENST00000359541 hDV103S1A0JD37 113 aa5.84□□□□□ -1.47
GTF3C2-202ENST00000359541 DNAH10Q8IVF4 4471 aa5.84□□□□□ -1.47
GTF3C2-202ENST00000359541 DNAH9Q9NYC9 4486 aa5.84□□□□□ -1.48
GTF3C2-202ENST00000359541 H3BPC8 53 aa5.83□□□□□ -1.48
GTF3C2-202ENST00000359541 OCR1Q9BZK8 76 aa5.83□□□□□ -1.48
GTF3C2-202ENST00000359541 A6NED7 52 aa5.83□□□□□ -1.48
GTF3C2-202ENST00000359541 SPRR1BP22528 89 aa5.83□□□□□ -1.48
GTF3C2-202ENST00000359541 RETNLBQ9BQ08 111 aa5.82□□□□□ -1.48
GTF3C2-202ENST00000359541 A8MU10 97 aa5.82□□□□□ -1.48
GTF3C2-202ENST00000359541 CASC2Q6XLA1 102 aa5.82□□□□□ -1.48
GTF3C2-202ENST00000359541 K7EQZ3 153 aa5.82□□□□□ -1.48
GTF3C2-202ENST00000359541 LINC00208Q96KT6 92 aa5.82□□□□□ -1.48
GTF3C2-202ENST00000359541 DNAH7Q8WXX0 4024 aa5.81□□□□□ -1.48
GTF3C2-202ENST00000359541 A8MUN3 132 aa5.81□□□□□ -1.48
GTF3C2-202ENST00000359541 DSCR10P59022 87 aa5.81□□□□□ -1.48
GTF3C2-202ENST00000359541 KTN1-AS1Q86SY8 53 aa5.8□□□□□ -1.48
GTF3C2-202ENST00000359541 A0A087WTM6 91 aa5.79□□□□□ -1.48
GTF3C2-202ENST00000359541 C8orf87E5RJ46 101 aa5.79□□□□□ -1.48
GTF3C2-202ENST00000359541 Q6ZRN7 208 aaPredicted RBP5.79□□□□□ -1.48
GTF3C2-202ENST00000359541 HUWE1Q7Z6Z7 4374 aaKnown RBP5.79□□□□□ -1.48
GTF3C2-202ENST00000359541 PRR15Q8IV56 129 aa5.78□□□□□ -1.48
GTF3C2-202ENST00000359541 SPACA4Q8TDM5 124 aa5.78□□□□□ -1.48
GTF3C2-202ENST00000359541 FAM229AH3BQW9 127 aa5.78□□□□□ -1.48
GTF3C2-202ENST00000359541 H0Y9P7 68 aa5.77□□□□□ -1.49
GTF3C2-202ENST00000359541 RTL8CO15255 209 aa5.77□□□□□ -1.49
GTF3C2-202ENST00000359541 A0A0G2JQZ4 141 aa5.77□□□□□ -1.49
GTF3C2-202ENST00000359541 RPL37AP61513 92 aaKnown RBP5.76□□□□□ -1.49
GTF3C2-202ENST00000359541 PRR15LQ9BU68 103 aa5.76□□□□□ -1.49
GTF3C2-202ENST00000359541 TP53AIP1Q9HCN2 124 aa5.76□□□□□ -1.49
GTF3C2-202ENST00000359541 A8MWP4 228 aa5.75□□□□□ -1.49
GTF3C2-202ENST00000359541 KRTAP11-1Q8IUC1 163 aa5.75□□□□□ -1.49
GTF3C2-202ENST00000359541 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.74□□□□□ -1.49
GTF3C2-202ENST00000359541 SMR3BP02814 79 aaPredicted RBP5.74□□□□□ -1.49
GTF3C2-202ENST00000359541 LIMD2Q9BT23 127 aa5.74□□□□□ -1.49
GTF3C2-202ENST00000359541 IGHV6-1A0A0B4J1U7 121 aa5.73□□□□□ -1.49
GTF3C2-202ENST00000359541 DYNC2H1Q8NCM8 4307 aaKnown RBP5.72□□□□□ -1.49
GTF3C2-202ENST00000359541 KRTAP13-1Q8IUC0 172 aa5.72□□□□□ -1.49
GTF3C2-202ENST00000359541 PRAC1Q96KF2 57 aa5.72□□□□□ -1.49
GTF3C2-202ENST00000359541 PANO1I0J062 215 aa5.72□□□□□ -1.49
GTF3C2-202ENST00000359541 C1orf64Q8NEQ6 169 aa5.72□□□□□ -1.49
GTF3C2-202ENST00000359541 TRAV22A0A0B4J277 110 aa5.72□□□□□ -1.49
GTF3C2-202ENST00000359541 LCE6AA0A183 80 aa5.71□□□□□ -1.49
GTF3C2-202ENST00000359541 KRTAP21-3Q3LHN1 58 aa5.71□□□□□ -1.5
GTF3C2-202ENST00000359541 Q6ZR54 194 aa5.7□□□□□ -1.5
GTF3C2-202ENST00000359541 PLAC8Q9NZF1 115 aa5.7□□□□□ -1.5
GTF3C2-202ENST00000359541 LINC00472Q9H8W2 130 aa5.7□□□□□ -1.5
GTF3C2-202ENST00000359541 ZNF861PO60384 105 aa5.7□□□□□ -1.5
GTF3C2-202ENST00000359541 PSORS1C2Q9UIG4 136 aa5.7□□□□□ -1.5
GTF3C2-202ENST00000359541 ANAPC11Q9NYG5 84 aa5.69□□□□□ -1.5
GTF3C2-202ENST00000359541 LINC00483Q53H64 154 aa5.69□□□□□ -1.5
GTF3C2-202ENST00000359541 TENM2Q9NT68 2774 aa5.69□□□□□ -1.5
GTF3C2-202ENST00000359541 MOBPQ13875 183 aa5.69□□□□□ -1.5
GTF3C2-202ENST00000359541 TGP01266 2768 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms