RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 C4orf48Q5BLP8 95 aa4.96□□□□□ -1.62
CD46-203ENST00000354848 SPAG11AQ6PDA7 123 aa4.96□□□□□ -1.62
CD46-203ENST00000354848 KRTAP7-1Q8IUC3 87 aa4.96□□□□□ -1.62
CD46-203ENST00000354848 PLAC8Q9NZF1 115 aa4.96□□□□□ -1.62
CD46-203ENST00000354848 IGLV5-37A0A075B6J1 123 aa4.95□□□□□ -1.62
CD46-203ENST00000354848 C8orf87E5RJ46 101 aa4.95□□□□□ -1.62
CD46-203ENST00000354848 TLX1NBP0CAT3 122 aa4.95□□□□□ -1.62
CD46-203ENST00000354848 NOTCH2Q04721 2471 aa4.95□□□□□ -1.62
CD46-203ENST00000354848 HIVEP1P15822 2718 aa4.95□□□□□ -1.62
CD46-203ENST00000354848 MTORP42345 2549 aa4.95□□□□□ -1.62
CD46-203ENST00000354848 FLNAP21333 2647 aaKnown RBP4.95□□□□□ -1.62
CD46-203ENST00000354848 SPINK7P58062 85 aa4.94□□□□□ -1.62
CD46-203ENST00000354848 KRTAP1-3Q8IUG1 177 aa4.94□□□□□ -1.62
CD46-203ENST00000354848 FASNP49327 2511 aaKnown RBP4.93□□□□□ -1.62
CD46-203ENST00000354848 PKD1L1Q8TDX9 2849 aa4.93□□□□□ -1.62
CD46-203ENST00000354848 PCOTHQ58A44 107 aa4.93□□□□□ -1.62
CD46-203ENST00000354848 IGLV8-61A0A075B6I0 122 aa4.92□□□□□ -1.62
CD46-203ENST00000354848 A8MWP4 228 aa4.92□□□□□ -1.62
CD46-203ENST00000354848 KRTAP10-3P60369 221 aa4.92□□□□□ -1.62
CD46-203ENST00000354848 REG3GQ6UW15 175 aa4.91□□□□□ -1.62
CD46-203ENST00000354848 LINC00472Q9H8W2 130 aa4.9□□□□□ -1.62
CD46-203ENST00000354848 LINC00313P59037 77 aa4.9□□□□□ -1.63
CD46-203ENST00000354848 ACANP16112 2415 aa4.9□□□□□ -1.63
CD46-203ENST00000354848 TENM2Q9NT68 2774 aa4.89□□□□□ -1.63
CD46-203ENST00000354848 MMP24-AS1A0A0U1RRL7 71 aa4.89□□□□□ -1.63
CD46-203ENST00000354848 TRRAPQ9Y4A5 3859 aa4.89□□□□□ -1.63
CD46-203ENST00000354848 H3BNG1 76 aa4.89□□□□□ -1.63
CD46-203ENST00000354848 LINC01556Q5JQF7 62 aa4.89□□□□□ -1.63
CD46-203ENST00000354848 PRLHP81277 87 aa4.88□□□□□ -1.63
CD46-203ENST00000354848 PRAC1Q96KF2 57 aa4.88□□□□□ -1.63
CD46-203ENST00000354848 HELZ2Q9BYK8 2649 aaKnown RBP4.88□□□□□ -1.63
CD46-203ENST00000354848 HRES1P13985 223 aa4.88□□□□□ -1.63
CD46-203ENST00000354848 HECTD1Q9ULT8 2610 aa4.88□□□□□ -1.63
CD46-203ENST00000354848 H0Y9J4 135 aa4.87□□□□□ -1.63
CD46-203ENST00000354848 BAHCC1Q9P281 2608 aa4.86□□□□□ -1.63
CD46-203ENST00000354848 SRRM2Q9UQ35 2752 aaKnown RBP4.86□□□□□ -1.63
CD46-203ENST00000354848 CASC10Q5T4H9 136 aa4.86□□□□□ -1.63
CD46-203ENST00000354848 CSMD3Q7Z407 3707 aa4.86□□□□□ -1.63
CD46-203ENST00000354848 IGKV2-24A0A0C4DH68 120 aa4.85□□□□□ -1.63
CD46-203ENST00000354848 ADM2Q7Z4H4 148 aa4.85□□□□□ -1.63
CD46-203ENST00000354848 KRTAP1-1Q07627 177 aa4.84□□□□□ -1.63
CD46-203ENST00000354848 Q6ZR54 194 aa4.84□□□□□ -1.63
CD46-203ENST00000354848 TP53AIP1Q9HCN2 124 aa4.84□□□□□ -1.63
CD46-203ENST00000354848 FLNBO75369 2602 aaKnown RBP4.83□□□□□ -1.64
CD46-203ENST00000354848 UBR5O95071 2799 aaPredicted RBP4.83□□□□□ -1.64
CD46-203ENST00000354848 ASB16-AS1Q495Z4 193 aa4.83□□□□□ -1.64
CD46-203ENST00000354848 LINC01554Q52M75 96 aa4.82□□□□□ -1.64
CD46-203ENST00000354848 H3BS24 57 aa4.82□□□□□ -1.64
CD46-203ENST00000354848 PLA2G1BP04054 148 aaKnown RBP4.82□□□□□ -1.64
CD46-203ENST00000354848 DNAH10OSP0CZ25 163 aa4.82□□□□□ -1.64
CD46-203ENST00000354848 PRR26Q8N8Z3 221 aa4.82□□□□□ -1.64
CD46-203ENST00000354848 A0A096LNI7 61 aa4.81□□□□□ -1.64
CD46-203ENST00000354848 TENM1Q9UKZ4 2725 aa4.81□□□□□ -1.64
CD46-203ENST00000354848 DNAH1Q9P2D7 4330 aa4.8□□□□□ -1.64
CD46-203ENST00000354848 SPRR1BP22528 89 aa4.8□□□□□ -1.64
CD46-203ENST00000354848 TENM4Q6N022 2769 aa4.8□□□□□ -1.64
CD46-203ENST00000354848 DEFB131BA0A096LNP1 70 aa4.8□□□□□ -1.64
CD46-203ENST00000354848 Q96NJ1 140 aa4.79□□□□□ -1.64
CD46-203ENST00000354848 J3QKU1 62 aa4.79□□□□□ -1.64
CD46-203ENST00000354848 C8orf17Q9NRJ1 99 aa4.79□□□□□ -1.64
CD46-203ENST00000354848 PDZD2O15018 2839 aa4.79□□□□□ -1.64
CD46-203ENST00000354848 TEP1Q99973 2627 aaKnown RBP4.79□□□□□ -1.64
CD46-203ENST00000354848 TENM3Q9P273 2699 aa4.78□□□□□ -1.64
CD46-203ENST00000354848 ALMS1Q8TCU4 4167 aa4.78□□□□□ -1.64
CD46-203ENST00000354848 FBN1P35555 2871 aaKnown RBP4.77□□□□□ -1.65
CD46-203ENST00000354848 KRTAP11-1Q8IUC1 163 aa4.77□□□□□ -1.65
CD46-203ENST00000354848 MDFIQ99750 246 aa4.77□□□□□ -1.65
CD46-203ENST00000354848 RTL8CO15255 209 aa4.76□□□□□ -1.65
CD46-203ENST00000354848 ITPR2Q14571 2701 aa4.76□□□□□ -1.65
CD46-203ENST00000354848 IGHV6-1A0A0B4J1U7 121 aa4.75□□□□□ -1.65
CD46-203ENST00000354848 KMT2BQ9UMN6 2715 aaPredicted RBP4.75□□□□□ -1.65
CD46-203ENST00000354848 ANK2Q01484 3957 aa4.75□□□□□ -1.65
CD46-203ENST00000354848 MRPL34Q9BQ48 92 aaKnown RBP4.74□□□□□ -1.65
CD46-203ENST00000354848 A0A1B0GVX0 72 aa4.74□□□□□ -1.65
CD46-203ENST00000354848 K7EIL1 84 aa4.74□□□□□ -1.65
CD46-203ENST00000354848 A0A087X002 238 aa4.73□□□□□ -1.65
CD46-203ENST00000354848 SPATA8Q6RVD6 105 aa4.73□□□□□ -1.65
CD46-203ENST00000354848 DNAH10Q8IVF4 4471 aa4.73□□□□□ -1.65
CD46-203ENST00000354848 ACYP2P14621 99 aa4.72□□□□□ -1.65
CD46-203ENST00000354848 ATRQ13535 2644 aa4.72□□□□□ -1.65
CD46-203ENST00000354848 NOTCH2NLQ7Z3S9 236 aa4.72□□□□□ -1.65
CD46-203ENST00000354848 SMR3AQ99954 134 aa4.72□□□□□ -1.65
CD46-203ENST00000354848 A0A1B0GU69 56 aa4.71□□□□□ -1.66
CD46-203ENST00000354848 Q5W150 140 aa4.7□□□□□ -1.66
CD46-203ENST00000354848 LYSTQ99698 3801 aa4.7□□□□□ -1.66
CD46-203ENST00000354848 IGLV9-49A0A0B4J1Y8 123 aa4.7□□□□□ -1.66
CD46-203ENST00000354848 CHTF8P0CG12 524 aa4.7□□□□□ -1.66
CD46-203ENST00000354848 CSAG1Q6PB30 78 aa4.69□□□□□ -1.66
CD46-203ENST00000354848 CDK2AP2O75956 126 aa4.69□□□□□ -1.66
CD46-203ENST00000354848 KRTAP13-3Q3SY46 172 aa4.69□□□□□ -1.66
CD46-203ENST00000354848 COL7A1Q02388 2944 aa4.69□□□□□ -1.66
CD46-203ENST00000354848 MIR22HGQ0VDD5 57 aa4.68□□□□□ -1.66
CD46-203ENST00000354848 DMAC1Q96GE9 116 aa4.68□□□□□ -1.66
CD46-203ENST00000354848 RETNLBQ9BQ08 111 aa4.68□□□□□ -1.66
CD46-203ENST00000354848 KRTAP10-11P60412 298 aa4.67□□□□□ -1.66
CD46-203ENST00000354848 OXLD1Q5BKU9 147 aa4.67□□□□□ -1.66
CD46-203ENST00000354848 UQCR11O14957 56 aa4.67□□□□□ -1.66
CD46-203ENST00000354848 KRTAP13-1Q8IUC0 172 aa4.67□□□□□ -1.66
CD46-203ENST00000354848 DNAH9Q9NYC9 4486 aa4.64□□□□□ -1.67
CD46-203ENST00000354848 KRTAP1-5Q9BYS1 174 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms