RNA–Protein interactions for RNA: ENST00000354452.7

TCF4-201, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 3,482 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-201ENST00000354452 KRTAP1-1Q07627 177 aa11.32□□□□□ -0.6
TCF4-201ENST00000354452 SPRR4Q96PI1 79 aa11.31□□□□□ -0.6
TCF4-201ENST00000354452 CYP4F30PQ9H0H9 118 aa11.29□□□□□ -0.6
TCF4-201ENST00000354452 Q5VV11 94 aa11.29□□□□□ -0.6
TCF4-201ENST00000354452 LINC01556Q5JQF7 62 aa11.29□□□□□ -0.6
TCF4-201ENST00000354452 LIMD2Q9BT23 127 aa11.29□□□□□ -0.6
TCF4-201ENST00000354452 NBEAL1Q6ZS30 2694 aa11.28□□□□□ -0.6
TCF4-201ENST00000354452 SPAG11AQ6PDA7 123 aa11.27□□□□□ -0.61
TCF4-201ENST00000354452 TNP2Q05952 138 aa11.26□□□□□ -0.61
TCF4-201ENST00000354452 TENM3Q9P273 2699 aa11.26□□□□□ -0.61
TCF4-201ENST00000354452 LCE6AA0A183 80 aa11.24□□□□□ -0.61
TCF4-201ENST00000354452 Q8N9P0 234 aaPredicted RBP11.24□□□□□ -0.61
TCF4-201ENST00000354452 C16orf90A8MZG2 172 aa11.23□□□□□ -0.61
TCF4-201ENST00000354452 OTOGQ6ZRI0 2925 aa11.23□□□□□ -0.61
TCF4-201ENST00000354452 NSD1Q96L73 2696 aaPredicted RBP11.22□□□□□ -0.61
TCF4-201ENST00000354452 CD164Q04900 197 aa11.21□□□□□ -0.61
TCF4-201ENST00000354452 COA5Q86WW8 74 aa11.21□□□□□ -0.61
TCF4-201ENST00000354452 STAB1Q9NY15 2570 aa11.21□□□□□ -0.62
TCF4-201ENST00000354452 KRTAP4-16G5E9R7 235 aaPredicted RBP11.19□□□□□ -0.62
TCF4-201ENST00000354452 TRRAPQ9Y4A5 3859 aa11.18□□□□□ -0.62
TCF4-201ENST00000354452 SRRM2Q9UQ35 2752 aaKnown RBP11.18□□□□□ -0.62
TCF4-201ENST00000354452 SPRR1AP35321 89 aa11.17□□□□□ -0.62
TCF4-201ENST00000354452 H3BNG1 76 aa11.16□□□□□ -0.62
TCF4-201ENST00000354452 IGLV9-49A0A0B4J1Y8 123 aa11.15□□□□□ -0.63
TCF4-201ENST00000354452 KTN1-AS1Q86SY8 53 aa11.15□□□□□ -0.63
TCF4-201ENST00000354452 KRTAP7-1Q8IUC3 87 aa11.14□□□□□ -0.63
TCF4-201ENST00000354452 CDK2AP2O75956 126 aa11.14□□□□□ -0.63
TCF4-201ENST00000354452 TLX1NBP0CAT3 122 aa11.13□□□□□ -0.63
TCF4-201ENST00000354452 LINC00588Q9Y4M8 146 aa11.13□□□□□ -0.63
TCF4-201ENST00000354452 CHTF8P0CG12 524 aa11.12□□□□□ -0.63
TCF4-201ENST00000354452 RBM12B-AS1Q9P1G2 102 aa11.12□□□□□ -0.63
TCF4-201ENST00000354452 CNBPP62633 177 aaKnown RBP11.12□□□□□ -0.63
TCF4-201ENST00000354452 A8MWP4 228 aa11.11□□□□□ -0.63
TCF4-201ENST00000354452 PLA2G2DQ9UNK4 145 aa11.11□□□□□ -0.63
TCF4-201ENST00000354452 PHF5AQ7RTV0 110 aaKnown RBP11.11□□□□□ -0.63
TCF4-201ENST00000354452 DNAH10OSP0CZ25 163 aa11.1□□□□□ -0.63
TCF4-201ENST00000354452 MGAM2Q2M2H8 2515 aa11.1□□□□□ -0.63
TCF4-201ENST00000354452 J3QKU1 62 aa11.1□□□□□ -0.63
TCF4-201ENST00000354452 LCA10Q71F78 164 aa11.1□□□□□ -0.63
TCF4-201ENST00000354452 SPANXA2-OT1Q8N9U9 137 aa11.1□□□□□ -0.63
TCF4-201ENST00000354452 IGHV6-1A0A0B4J1U7 121 aa11.09□□□□□ -0.63
TCF4-201ENST00000354452 ATP11AUNQ6ZP68 121 aa11.09□□□□□ -0.63
TCF4-201ENST00000354452 H3BPC8 53 aa11.08□□□□□ -0.64
TCF4-201ENST00000354452 LOC101927531A0A1B0GV80 90 aa11.07□□□□□ -0.64
TCF4-201ENST00000354452 UBE2DNLQ8IWF7 75 aa11.06□□□□□ -0.64
TCF4-201ENST00000354452 FBN1P35555 2871 aaKnown RBP11.06□□□□□ -0.64
TCF4-201ENST00000354452 IGLV5-37A0A075B6J1 123 aa11.05□□□□□ -0.64
TCF4-201ENST00000354452 KRTAP29-1A8MX34 341 aaPredicted RBP11.04□□□□□ -0.64
TCF4-201ENST00000354452 KRTAP10-11P60412 298 aa11.04□□□□□ -0.64
TCF4-201ENST00000354452 C4orf48Q5BLP8 95 aa11.04□□□□□ -0.64
TCF4-201ENST00000354452 SPINK6Q6UWN8 80 aa11.02□□□□□ -0.65
TCF4-201ENST00000354452 KMT2BQ9UMN6 2715 aaPredicted RBP11.02□□□□□ -0.65
TCF4-201ENST00000354452 Q75L30 129 aa11□□□□□ -0.65
TCF4-201ENST00000354452 CDC42SE1Q9NRR8 79 aa10.97□□□□□ -0.65
TCF4-201ENST00000354452 IGLV7-46A0A075B6I9 117 aa10.97□□□□□ -0.65
TCF4-201ENST00000354452 SPINK7P58062 85 aa10.96□□□□□ -0.66
TCF4-201ENST00000354452 LINC00472Q9H8W2 130 aa10.96□□□□□ -0.66
TCF4-201ENST00000354452 C9orf163Q8N9P6 203 aa10.96□□□□□ -0.66
TCF4-201ENST00000354452 PRR26Q8N8Z3 221 aa10.94□□□□□ -0.66
TCF4-201ENST00000354452 MMP24-AS1A0A0U1RRL7 71 aa10.94□□□□□ -0.66
TCF4-201ENST00000354452 MOBPQ13875 183 aa10.92□□□□□ -0.66
TCF4-201ENST00000354452 C7orf65Q6ZTY9 151 aa10.92□□□□□ -0.66
TCF4-201ENST00000354452 ANK3Q12955 4377 aaKnown RBP10.91□□□□□ -0.66
TCF4-201ENST00000354452 CSMD3Q7Z407 3707 aa10.91□□□□□ -0.66
TCF4-201ENST00000354452 KRTAP11-1Q8IUC1 163 aa10.9□□□□□ -0.66
TCF4-201ENST00000354452 TP53AIP1Q9HCN2 124 aa10.89□□□□□ -0.67
TCF4-201ENST00000354452 COL7A1Q02388 2944 aa10.89□□□□□ -0.67
TCF4-201ENST00000354452 STAB2Q8WWQ8 2551 aa10.89□□□□□ -0.67
TCF4-201ENST00000354452 RETNLBQ9BQ08 111 aa10.89□□□□□ -0.67
TCF4-201ENST00000354452 IGLV8-61A0A075B6I0 122 aa10.88□□□□□ -0.67
TCF4-201ENST00000354452 C8orf17Q9NRJ1 99 aa10.88□□□□□ -0.67
TCF4-201ENST00000354452 PRAC1Q96KF2 57 aa10.87□□□□□ -0.67
TCF4-201ENST00000354452 ANAPC11Q9NYG5 84 aa10.86□□□□□ -0.67
TCF4-201ENST00000354452 A6NN06 94 aa10.86□□□□□ -0.67
TCF4-201ENST00000354452 HRES1P13985 223 aa10.86□□□□□ -0.67
TCF4-201ENST00000354452 LINC01558Q9Y6Z2 57 aa10.85□□□□□ -0.67
TCF4-201ENST00000354452 TENM2Q9NT68 2774 aa10.82□□□□□ -0.68
TCF4-201ENST00000354452 K7EIL1 84 aa10.81□□□□□ -0.68
TCF4-201ENST00000354452 MRPL34Q9BQ48 92 aaKnown RBP10.8□□□□□ -0.68
TCF4-201ENST00000354452 KRTAP1-5Q9BYS1 174 aa10.79□□□□□ -0.68
TCF4-201ENST00000354452 C14orf177Q52M58 125 aa10.77□□□□□ -0.68
TCF4-201ENST00000354452 A0A1B0GVX0 72 aa10.76□□□□□ -0.69
TCF4-201ENST00000354452 H3BS24 57 aa10.74□□□□□ -0.69
TCF4-201ENST00000354452 LINC00313P59037 77 aa10.74□□□□□ -0.69
TCF4-201ENST00000354452 A0A087X002 238 aa10.74□□□□□ -0.69
TCF4-201ENST00000354452 NOTCH2NLQ7Z3S9 236 aa10.74□□□□□ -0.69
TCF4-201ENST00000354452 MDFIQ99750 246 aa10.73□□□□□ -0.69
TCF4-201ENST00000354452 CIRBP-AS1Q8TBR5 109 aa10.72□□□□□ -0.69
TCF4-201ENST00000354452 A0A1B0GU69 56 aa10.71□□□□□ -0.69
TCF4-201ENST00000354452 SPRR1BP22528 89 aa10.71□□□□□ -0.7
TCF4-201ENST00000354452 ACYP2P14621 99 aa10.7□□□□□ -0.7
TCF4-201ENST00000354452 ADM2Q7Z4H4 148 aa10.7□□□□□ -0.7
TCF4-201ENST00000354452 PANO1I0J062 215 aa10.68□□□□□ -0.7
TCF4-201ENST00000354452 Q6ZR54 194 aa10.64□□□□□ -0.71
TCF4-201ENST00000354452 KRTAP24-1Q3LI83 254 aa10.63□□□□□ -0.71
TCF4-201ENST00000354452 Q96NJ1 140 aa10.62□□□□□ -0.71
TCF4-201ENST00000354452 Q5W150 140 aa10.62□□□□□ -0.71
TCF4-201ENST00000354452 C8orf87E5RJ46 101 aa10.61□□□□□ -0.71
TCF4-201ENST00000354452 ZNF706Q9Y5V0 76 aaPredicted RBP10.6□□□□□ -0.71
TCF4-201ENST00000354452 SPINK1P00995 79 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms