RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 Q8NDZ9 215 aa7.97□□□□□ -1.13
LMBR1-201ENST00000353442 CEP295Q9C0D2 2601 aa7.97□□□□□ -1.13
LMBR1-201ENST00000353442 Q6ZR54 194 aa7.93□□□□□ -1.14
LMBR1-201ENST00000353442 HECTD1Q9ULT8 2610 aa7.91□□□□□ -1.14
LMBR1-201ENST00000353442 LINC00472Q9H8W2 130 aa7.9□□□□□ -1.15
LMBR1-201ENST00000353442 A8MUU9 505 aa7.89□□□□□ -1.15
LMBR1-201ENST00000353442 KRTAP26-1Q6PEX3 210 aa7.89□□□□□ -1.15
LMBR1-201ENST00000353442 CYSTM1Q9H1C7 97 aa7.89□□□□□ -1.15
LMBR1-201ENST00000353442 A0A087X002 238 aa7.88□□□□□ -1.15
LMBR1-201ENST00000353442 EP400Q96L91 3159 aa7.88□□□□□ -1.15
LMBR1-201ENST00000353442 PANO1I0J062 215 aa7.88□□□□□ -1.15
LMBR1-201ENST00000353442 Q5VV11 94 aa7.86□□□□□ -1.15
LMBR1-201ENST00000353442 SPRR1BP22528 89 aa7.85□□□□□ -1.15
LMBR1-201ENST00000353442 SPRR1AP35321 89 aa7.82□□□□□ -1.16
LMBR1-201ENST00000353442 Q5XG85 94 aa7.82□□□□□ -1.16
LMBR1-201ENST00000353442 A0A1B0GVY2 172 aa7.8□□□□□ -1.16
LMBR1-201ENST00000353442 A8MU10 97 aa7.79□□□□□ -1.16
LMBR1-201ENST00000353442 FLNBO75369 2602 aaKnown RBP7.79□□□□□ -1.16
LMBR1-201ENST00000353442 EPG5Q9HCE0 2579 aa7.78□□□□□ -1.16
LMBR1-201ENST00000353442 C10orf95Q9H7T3 257 aa7.76□□□□□ -1.17
LMBR1-201ENST00000353442 ATRQ13535 2644 aa7.72□□□□□ -1.17
LMBR1-201ENST00000353442 GOLGB1Q14789 3259 aaKnown RBP7.72□□□□□ -1.17
LMBR1-201ENST00000353442 NOTCH2NLQ7Z3S9 236 aa7.71□□□□□ -1.18
LMBR1-201ENST00000353442 KRTAP10-8P60410 259 aa7.7□□□□□ -1.18
LMBR1-201ENST00000353442 TNP1P09430 55 aa7.67□□□□□ -1.18
LMBR1-201ENST00000353442 KRTAP16-1A8MUX0 517 aa7.64□□□□□ -1.19
LMBR1-201ENST00000353442 MAST4O15021 2626 aa7.64□□□□□ -1.19
LMBR1-201ENST00000353442 C5orf42Q9H799 3197 aa7.58□□□□□ -1.2
LMBR1-201ENST00000353442 CEP350Q5VT06 3117 aa7.58□□□□□ -1.2
LMBR1-201ENST00000353442 CFAP46Q8IYW2 2715 aa7.57□□□□□ -1.2
LMBR1-201ENST00000353442 KRTAP11-1Q8IUC1 163 aa7.55□□□□□ -1.2
LMBR1-201ENST00000353442 ITPR3Q14573 2671 aa7.55□□□□□ -1.2
LMBR1-201ENST00000353442 FLNAP21333 2647 aaKnown RBP7.54□□□□□ -1.2
LMBR1-201ENST00000353442 STAB1Q9NY15 2570 aa7.54□□□□□ -1.2
LMBR1-201ENST00000353442 DMBT1Q9UGM3 2413 aaPredicted RBP7.53□□□□□ -1.2
LMBR1-201ENST00000353442 NDUFAF8A1L188 74 aa7.53□□□□□ -1.2
LMBR1-201ENST00000353442 KRTAP10-10P60014 251 aa7.49□□□□□ -1.21
LMBR1-201ENST00000353442 KRTAP25-1Q3LHN0 102 aa7.49□□□□□ -1.21
LMBR1-201ENST00000353442 KRTAP13-2Q52LG2 175 aa7.47□□□□□ -1.21
LMBR1-201ENST00000353442 HELZ2Q9BYK8 2649 aaKnown RBP7.46□□□□□ -1.22
LMBR1-201ENST00000353442 P0C880 135 aa7.45□□□□□ -1.22
LMBR1-201ENST00000353442 PRRC2CQ9Y520 2896 aaKnown RBP7.44□□□□□ -1.22
LMBR1-201ENST00000353442 KRTAP29-1A8MX34 341 aaPredicted RBP7.42□□□□□ -1.22
LMBR1-201ENST00000353442 KRTAP4-16G5E9R7 235 aaPredicted RBP7.41□□□□□ -1.22
LMBR1-201ENST00000353442 RPS29P62273 56 aaKnown RBP7.38□□□□□ -1.23
LMBR1-201ENST00000353442 NBEAL1Q6ZS30 2694 aa7.36□□□□□ -1.23
LMBR1-201ENST00000353442 Q6ZRN7 208 aaPredicted RBP7.36□□□□□ -1.23
LMBR1-201ENST00000353442 UTRNP46939 3433 aa7.36□□□□□ -1.23
LMBR1-201ENST00000353442 STAB2Q8WWQ8 2551 aa7.34□□□□□ -1.23
LMBR1-201ENST00000353442 TEX15Q9BXT5 2789 aa7.32□□□□□ -1.24
LMBR1-201ENST00000353442 DNAH12Q6ZR08 3092 aa7.32□□□□□ -1.24
LMBR1-201ENST00000353442 SETXQ7Z333 2677 aaKnown RBP7.31□□□□□ -1.24
LMBR1-201ENST00000353442 ASB16-AS1Q495Z4 193 aa7.29□□□□□ -1.24
LMBR1-201ENST00000353442 AKAP13Q12802 2813 aa7.28□□□□□ -1.24
LMBR1-201ENST00000353442 PRO2289Q9P1D8 64 aa7.28□□□□□ -1.24
LMBR1-201ENST00000353442 A6NN06 94 aa7.24□□□□□ -1.25
LMBR1-201ENST00000353442 KRTAP7-1Q8IUC3 87 aa7.24□□□□□ -1.25
LMBR1-201ENST00000353442 TEP1Q99973 2627 aaKnown RBP7.23□□□□□ -1.25
LMBR1-201ENST00000353442 XP32Q5T750 250 aa7.22□□□□□ -1.25
LMBR1-201ENST00000353442 CHD6Q8TD26 2715 aa7.22□□□□□ -1.25
LMBR1-201ENST00000353442 A0A0C4DFX4 3053 aa7.2□□□□□ -1.26
LMBR1-201ENST00000353442 UNC79Q9P2D8 2635 aa7.13□□□□□ -1.27
LMBR1-201ENST00000353442 PCNTO95613 3336 aa7.12□□□□□ -1.27
LMBR1-201ENST00000353442 BAHCC1Q9P281 2608 aa7.11□□□□□ -1.27
LMBR1-201ENST00000353442 CFAP54Q96N23 3096 aa7.1□□□□□ -1.27
LMBR1-201ENST00000353442 KRTAP13-1Q8IUC0 172 aa7.1□□□□□ -1.27
LMBR1-201ENST00000353442 COL6A5A8TX70 2615 aa7.09□□□□□ -1.27
LMBR1-201ENST00000353442 PP632Q6XCG6 107 aa7.08□□□□□ -1.28
LMBR1-201ENST00000353442 CENPEQ02224 2701 aa7.07□□□□□ -1.28
LMBR1-201ENST00000353442 FRYQ5TBA9 3013 aa7.05□□□□□ -1.28
LMBR1-201ENST00000353442 KRTAP21-3Q3LHN1 58 aa7.04□□□□□ -1.28
LMBR1-201ENST00000353442 CRYBG3Q68DQ2 2970 aa7.04□□□□□ -1.28
LMBR1-201ENST00000353442 TPRXLQ17RH7 258 aa6.99□□□□□ -1.29
LMBR1-201ENST00000353442 USP34Q70CQ2 3546 aa6.98□□□□□ -1.29
LMBR1-201ENST00000353442 KMT2BQ9UMN6 2715 aaPredicted RBP6.96□□□□□ -1.3
LMBR1-201ENST00000353442 NOTCH1P46531 2555 aa6.94□□□□□ -1.3
LMBR1-201ENST00000353442 FREM2Q5SZK8 3169 aa6.94□□□□□ -1.3
LMBR1-201ENST00000353442 MGAQ8IWI9 3026 aa6.93□□□□□ -1.3
LMBR1-201ENST00000353442 KRTAP1-4P0C5Y4 121 aa6.92□□□□□ -1.3
LMBR1-201ENST00000353442 GCN1Q92616 2671 aaKnown RBP6.9□□□□□ -1.3
LMBR1-201ENST00000353442 NBEAL2Q6ZNJ1 2754 aa6.9□□□□□ -1.31
LMBR1-201ENST00000353442 XIRP2A4UGR9 3374 aa6.88□□□□□ -1.31
LMBR1-201ENST00000353442 H0YAA0 97 aa6.88□□□□□ -1.31
LMBR1-201ENST00000353442 MKI67P46013 3256 aaKnown RBP6.87□□□□□ -1.31
LMBR1-201ENST00000353442 CRCT1Q9UGL9 99 aa6.86□□□□□ -1.31
LMBR1-201ENST00000353442 LAMA2P24043 3122 aaKnown RBP6.85□□□□□ -1.31
LMBR1-201ENST00000353442 REV3LO60673 3130 aa6.85□□□□□ -1.31
LMBR1-201ENST00000353442 UNC80Q8N2C7 3258 aa6.84□□□□□ -1.31
LMBR1-201ENST00000353442 IGSF10Q6WRI0 2623 aa6.84□□□□□ -1.31
LMBR1-201ENST00000353442 TRIOO75962 3097 aa6.83□□□□□ -1.32
LMBR1-201ENST00000353442 KRTAP13-3Q3SY46 172 aa6.83□□□□□ -1.32
LMBR1-201ENST00000353442 CELSR3Q9NYQ7 3312 aa6.82□□□□□ -1.32
LMBR1-201ENST00000353442 ITPR2Q14571 2701 aa6.79□□□□□ -1.32
LMBR1-201ENST00000353442 KRTAP12-2P59991 146 aa6.79□□□□□ -1.32
LMBR1-201ENST00000353442 ZNF292O60281 2723 aa6.78□□□□□ -1.32
LMBR1-201ENST00000353442 CHD7Q9P2D1 2997 aa6.77□□□□□ -1.32
LMBR1-201ENST00000353442 WDFY4Q6ZS81 3184 aa6.76□□□□□ -1.33
LMBR1-201ENST00000353442 PRUNE2Q8WUY3 3088 aa6.76□□□□□ -1.33
LMBR1-201ENST00000353442 NSD1Q96L73 2696 aaPredicted RBP6.75□□□□□ -1.33
LMBR1-201ENST00000353442 LAMA3Q16787 3333 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms