RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 TRBV7-4A0A0J9YYF1 115 aa8.75□□□□□ -1.01
SMC6-201ENST00000351948 ZFHX4Q86UP3 3567 aa8.75□□□□□ -1.01
SMC6-201ENST00000351948 K7EQZ3 153 aa8.75□□□□□ -1.01
SMC6-201ENST00000351948 IGLV7-43P04211 117 aa8.75□□□□□ -1.01
SMC6-201ENST00000351948 Q96NJ1 140 aa8.75□□□□□ -1.01
SMC6-201ENST00000351948 KRTAP1-5Q9BYS1 174 aa8.75□□□□□ -1.01
SMC6-201ENST00000351948 SERP1Q9Y6X1 66 aa8.74□□□□□ -1.01
SMC6-201ENST00000351948 LINC00336Q6ZUF6 198 aa8.74□□□□□ -1.01
SMC6-201ENST00000351948 ATP5EP56381 51 aaPredicted RBP8.73□□□□□ -1.01
SMC6-201ENST00000351948 PLA2G2DQ9UNK4 145 aa8.73□□□□□ -1.01
SMC6-201ENST00000351948 A6NED7 52 aa8.7□□□□□ -1.02
SMC6-201ENST00000351948 LINC00304Q8N9R0 145 aa8.7□□□□□ -1.02
SMC6-201ENST00000351948 C9orf92A6NGG3 77 aa8.69□□□□□ -1.02
SMC6-201ENST00000351948 A0A1B0GW54 56 aa8.69□□□□□ -1.02
SMC6-201ENST00000351948 DSCR10P59022 87 aa8.68□□□□□ -1.02
SMC6-201ENST00000351948 SPRR4Q96PI1 79 aa8.68□□□□□ -1.02
SMC6-201ENST00000351948 PRR15LQ9BU68 103 aa8.68□□□□□ -1.02
SMC6-201ENST00000351948 Q8NDZ9 215 aa8.67□□□□□ -1.02
SMC6-201ENST00000351948 A0A0U1RQV1 116 aa8.67□□□□□ -1.02
SMC6-201ENST00000351948 A8MWP4 228 aa8.66□□□□□ -1.02
SMC6-201ENST00000351948 C7orf65Q6ZTY9 151 aa8.66□□□□□ -1.02
SMC6-201ENST00000351948 OBSCN-AS1Q96MR7 158 aa8.65□□□□□ -1.02
SMC6-201ENST00000351948 SSBP3-AS1Q7Z2R9 100 aa8.64□□□□□ -1.03
SMC6-201ENST00000351948 TRAV22A0A0B4J277 110 aa8.64□□□□□ -1.03
SMC6-201ENST00000351948 PSPHP1O15172 72 aa8.64□□□□□ -1.03
SMC6-201ENST00000351948 TP53AIP1Q9HCN2 124 aa8.64□□□□□ -1.03
SMC6-201ENST00000351948 A0A1W2PNM2 257 aa8.63□□□□□ -1.03
SMC6-201ENST00000351948 V9GYY9 64 aa8.62□□□□□ -1.03
SMC6-201ENST00000351948 SVIPQ8NHG7 77 aa8.62□□□□□ -1.03
SMC6-201ENST00000351948 MXRA5Q9NR99 2828 aa8.61□□□□□ -1.03
SMC6-201ENST00000351948 IGLV5-37A0A075B6J1 123 aa8.6□□□□□ -1.03
SMC6-201ENST00000351948 K7ERS5 55 aa8.6□□□□□ -1.03
SMC6-201ENST00000351948 SMIM26A0A096LP01 95 aa8.6□□□□□ -1.03
SMC6-201ENST00000351948 ATP11AUNQ6ZP68 121 aa8.6□□□□□ -1.03
SMC6-201ENST00000351948 MRPL34Q9BQ48 92 aaKnown RBP8.59□□□□□ -1.03
SMC6-201ENST00000351948 PRR15Q8IV56 129 aa8.57□□□□□ -1.04
SMC6-201ENST00000351948 C8orf17Q9NRJ1 99 aa8.57□□□□□ -1.04
SMC6-201ENST00000351948 PRR26Q8N8Z3 221 aa8.56□□□□□ -1.04
SMC6-201ENST00000351948 A0A1B0GVX0 72 aa8.55□□□□□ -1.04
SMC6-201ENST00000351948 SMG1Q96Q15 3661 aaKnown RBP8.55□□□□□ -1.04
SMC6-201ENST00000351948 KRTAP26-1Q6PEX3 210 aa8.54□□□□□ -1.04
SMC6-201ENST00000351948 KRTAP10-2P60368 255 aa8.53□□□□□ -1.04
SMC6-201ENST00000351948 C8orf87E5RJ46 101 aa8.53□□□□□ -1.04
SMC6-201ENST00000351948 SPAG11AQ6PDA7 123 aa8.53□□□□□ -1.04
SMC6-201ENST00000351948 DMBT1Q9UGM3 2413 aaPredicted RBP8.52□□□□□ -1.04
SMC6-201ENST00000351948 IGLV5-48A0A075B6I7 105 aa8.5□□□□□ -1.05
SMC6-201ENST00000351948 PLAC8Q9NZF1 115 aa8.49□□□□□ -1.05
SMC6-201ENST00000351948 ACYP2P14621 99 aa8.48□□□□□ -1.05
SMC6-201ENST00000351948 KRTAP10-1P60331 282 aa8.48□□□□□ -1.05
SMC6-201ENST00000351948 IGLV8-61A0A075B6I0 122 aa8.47□□□□□ -1.05
SMC6-201ENST00000351948 LCE6AA0A183 80 aa8.47□□□□□ -1.05
SMC6-201ENST00000351948 PANO1I0J062 215 aa8.47□□□□□ -1.05
SMC6-201ENST00000351948 COX6B2Q6YFQ2 88 aa8.45□□□□□ -1.06
SMC6-201ENST00000351948 LOC101927531A0A1B0GV80 90 aa8.45□□□□□ -1.06
SMC6-201ENST00000351948 H3BPC8 53 aa8.43□□□□□ -1.06
SMC6-201ENST00000351948 NBPF19A0A087WUL8 3843 aa8.41□□□□□ -1.06
SMC6-201ENST00000351948 A0A1B0GU69 56 aa8.41□□□□□ -1.06
SMC6-201ENST00000351948 SPRR1AP35321 89 aa8.41□□□□□ -1.06
SMC6-201ENST00000351948 CELSR1Q9NYQ6 3014 aa8.4□□□□□ -1.06
SMC6-201ENST00000351948 ZFHX3Q15911 3703 aa8.4□□□□□ -1.07
SMC6-201ENST00000351948 PKD1L1Q8TDX9 2849 aa8.38□□□□□ -1.07
SMC6-201ENST00000351948 Q6ZR54 194 aa8.37□□□□□ -1.07
SMC6-201ENST00000351948 FBN1P35555 2871 aaKnown RBP8.35□□□□□ -1.07
SMC6-201ENST00000351948 TENM1Q9UKZ4 2725 aa8.34□□□□□ -1.07
SMC6-201ENST00000351948 Q8N1X5 172 aa8.33□□□□□ -1.08
SMC6-201ENST00000351948 IGLV7-46A0A075B6I9 117 aa8.33□□□□□ -1.08
SMC6-201ENST00000351948 PMAIP1Q13794 54 aa8.33□□□□□ -1.08
SMC6-201ENST00000351948 Q5VSD8 79 aa8.33□□□□□ -1.08
SMC6-201ENST00000351948 COA5Q86WW8 74 aa8.32□□□□□ -1.08
SMC6-201ENST00000351948 CSMD1Q96PZ7 3565 aa8.31□□□□□ -1.08
SMC6-201ENST00000351948 FLG2Q5D862 2391 aaPredicted RBP8.31□□□□□ -1.08
SMC6-201ENST00000351948 TENM3Q9P273 2699 aa8.3□□□□□ -1.08
SMC6-201ENST00000351948 OTOGQ6ZRI0 2925 aa8.3□□□□□ -1.08
SMC6-201ENST00000351948 SVEP1Q4LDE5 3571 aa8.29□□□□□ -1.08
SMC6-201ENST00000351948 C4orf26Q17RF5 130 aa8.29□□□□□ -1.08
SMC6-201ENST00000351948 FAM229BQ4G0N7 80 aa8.28□□□□□ -1.08
SMC6-201ENST00000351948 PDZD2O15018 2839 aa8.28□□□□□ -1.08
SMC6-201ENST00000351948 CD164Q04900 197 aa8.27□□□□□ -1.09
SMC6-201ENST00000351948 KLKP1Q107X0 134 aa8.27□□□□□ -1.09
SMC6-201ENST00000351948 CSMD2Q7Z408 3487 aa8.26□□□□□ -1.09
SMC6-201ENST00000351948 Q6ZRN7 208 aaPredicted RBP8.24□□□□□ -1.09
SMC6-201ENST00000351948 CUBNO60494 3623 aa8.24□□□□□ -1.09
SMC6-201ENST00000351948 H7BZZ5 65 aa8.24□□□□□ -1.09
SMC6-201ENST00000351948 KRTAP11-1Q8IUC1 163 aa8.24□□□□□ -1.09
SMC6-201ENST00000351948 LINC01600Q96MT4 127 aa8.23□□□□□ -1.09
SMC6-201ENST00000351948 TENM2Q9NT68 2774 aa8.23□□□□□ -1.09
SMC6-201ENST00000351948 SPRR1BP22528 89 aa8.22□□□□□ -1.09
SMC6-201ENST00000351948 A8MUN3 132 aa8.21□□□□□ -1.09
SMC6-201ENST00000351948 C1orf195Q5TG92 126 aa8.21□□□□□ -1.1
SMC6-201ENST00000351948 Q6ZSA8 131 aa8.21□□□□□ -1.1
SMC6-201ENST00000351948 OCR1Q9BZK8 76 aa8.2□□□□□ -1.1
SMC6-201ENST00000351948 SPENQ96T58 3664 aaKnown RBP8.2□□□□□ -1.1
SMC6-201ENST00000351948 RBM12B-AS1Q9P1G2 102 aa8.19□□□□□ -1.1
SMC6-201ENST00000351948 KRTAP4-16G5E9R7 235 aaPredicted RBP8.19□□□□□ -1.1
SMC6-201ENST00000351948 VWFP04275 2813 aa8.19□□□□□ -1.1
SMC6-201ENST00000351948 MMP24-AS1A0A0U1RRL7 71 aa8.18□□□□□ -1.1
SMC6-201ENST00000351948 A0A087X002 238 aa8.18□□□□□ -1.1
SMC6-201ENST00000351948 RPS28P62857 69 aaKnown RBP8.17□□□□□ -1.1
SMC6-201ENST00000351948 LINC00472Q9H8W2 130 aa8.16□□□□□ -1.1
SMC6-201ENST00000351948 KRTAP7-1Q8IUC3 87 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms