RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 IGLV1-50A0A075B6I6 118 aa8.36□□□□□ -1.07
IFT88-202ENST00000351808 SPRR1AP35321 89 aa8.36□□□□□ -1.07
IFT88-202ENST00000351808 ZNF469Q96JG9 3925 aaPredicted RBP8.35□□□□□ -1.07
IFT88-202ENST00000351808 LINC01554Q52M75 96 aa8.35□□□□□ -1.07
IFT88-202ENST00000351808 MDFIQ99750 246 aa8.35□□□□□ -1.07
IFT88-202ENST00000351808 ACANP16112 2415 aa8.34□□□□□ -1.07
IFT88-202ENST00000351808 Q8NAQ8 132 aa8.34□□□□□ -1.07
IFT88-202ENST00000351808 UBR5O95071 2799 aaPredicted RBP8.34□□□□□ -1.07
IFT88-202ENST00000351808 IGLV5-37A0A075B6J1 123 aa8.33□□□□□ -1.08
IFT88-202ENST00000351808 NOTCH2Q04721 2471 aa8.31□□□□□ -1.08
IFT88-202ENST00000351808 TENM4Q6N022 2769 aa8.31□□□□□ -1.08
IFT88-202ENST00000351808 PRR26Q8N8Z3 221 aa8.3□□□□□ -1.08
IFT88-202ENST00000351808 ITPR2Q14571 2701 aa8.29□□□□□ -1.08
IFT88-202ENST00000351808 HRES1P13985 223 aa8.29□□□□□ -1.08
IFT88-202ENST00000351808 KRTAP7-1Q8IUC3 87 aa8.29□□□□□ -1.08
IFT88-202ENST00000351808 FLNAP21333 2647 aaKnown RBP8.29□□□□□ -1.08
IFT88-202ENST00000351808 A8MWP4 228 aa8.29□□□□□ -1.08
IFT88-202ENST00000351808 ITPR3Q14573 2671 aa8.28□□□□□ -1.08
IFT88-202ENST00000351808 HELZ2Q9BYK8 2649 aaKnown RBP8.28□□□□□ -1.08
IFT88-202ENST00000351808 SPART-AS1P0CW21 52 aa8.27□□□□□ -1.09
IFT88-202ENST00000351808 H0Y9J4 135 aa8.26□□□□□ -1.09
IFT88-202ENST00000351808 PLA2G1BP04054 148 aaKnown RBP8.26□□□□□ -1.09
IFT88-202ENST00000351808 PLA2G2DQ9UNK4 145 aa8.26□□□□□ -1.09
IFT88-202ENST00000351808 KRTAP10-9P60411 292 aa8.25□□□□□ -1.09
IFT88-202ENST00000351808 MMP24-AS1A0A0U1RRL7 71 aa8.24□□□□□ -1.09
IFT88-202ENST00000351808 LINC00472Q9H8W2 130 aa8.24□□□□□ -1.09
IFT88-202ENST00000351808 REG3GQ6UW15 175 aa8.23□□□□□ -1.09
IFT88-202ENST00000351808 PRLHP81277 87 aa8.22□□□□□ -1.09
IFT88-202ENST00000351808 IGLV8-61A0A075B6I0 122 aa8.22□□□□□ -1.09
IFT88-202ENST00000351808 BAHCC1Q9P281 2608 aa8.21□□□□□ -1.09
IFT88-202ENST00000351808 TLX1NBP0CAT3 122 aa8.21□□□□□ -1.1
IFT88-202ENST00000351808 VWFP04275 2813 aa8.21□□□□□ -1.1
IFT88-202ENST00000351808 HECTD1Q9ULT8 2610 aa8.2□□□□□ -1.1
IFT88-202ENST00000351808 PKD1L1Q8TDX9 2849 aa8.2□□□□□ -1.1
IFT88-202ENST00000351808 IGKV2-24A0A0C4DH68 120 aa8.2□□□□□ -1.1
IFT88-202ENST00000351808 HIVEP1P15822 2718 aa8.19□□□□□ -1.1
IFT88-202ENST00000351808 SRRM2Q9UQ35 2752 aaKnown RBP8.19□□□□□ -1.1
IFT88-202ENST00000351808 ANK3Q12955 4377 aaKnown RBP8.17□□□□□ -1.1
IFT88-202ENST00000351808 FASNP49327 2511 aaKnown RBP8.16□□□□□ -1.1
IFT88-202ENST00000351808 A0A096LNI7 61 aa8.16□□□□□ -1.1
IFT88-202ENST00000351808 RTL8CO15255 209 aa8.15□□□□□ -1.1
IFT88-202ENST00000351808 TENM2Q9NT68 2774 aa8.15□□□□□ -1.11
IFT88-202ENST00000351808 Q6ZR54 194 aa8.14□□□□□ -1.11
IFT88-202ENST00000351808 TP53AIP1Q9HCN2 124 aa8.14□□□□□ -1.11
IFT88-202ENST00000351808 CASC10Q5T4H9 136 aa8.13□□□□□ -1.11
IFT88-202ENST00000351808 DEFB113Q30KQ7 82 aa8.11□□□□□ -1.11
IFT88-202ENST00000351808 DEFB131BA0A096LNP1 70 aa8.11□□□□□ -1.11
IFT88-202ENST00000351808 CSAG1Q6PB30 78 aa8.11□□□□□ -1.11
IFT88-202ENST00000351808 KRTAP10-3P60369 221 aa8.1□□□□□ -1.11
IFT88-202ENST00000351808 LINC01556Q5JQF7 62 aa8.1□□□□□ -1.11
IFT88-202ENST00000351808 RETNLBQ9BQ08 111 aa8.1□□□□□ -1.11
IFT88-202ENST00000351808 ASB16-AS1Q495Z4 193 aa8.09□□□□□ -1.11
IFT88-202ENST00000351808 CSMD3Q7Z407 3707 aa8.08□□□□□ -1.12
IFT88-202ENST00000351808 PDZD2O15018 2839 aa8.08□□□□□ -1.12
IFT88-202ENST00000351808 C8orf17Q9NRJ1 99 aa8.07□□□□□ -1.12
IFT88-202ENST00000351808 TRRAPQ9Y4A5 3859 aa8.07□□□□□ -1.12
IFT88-202ENST00000351808 SPATA8Q6RVD6 105 aa8.06□□□□□ -1.12
IFT88-202ENST00000351808 K7EIL1 84 aa8.05□□□□□ -1.12
IFT88-202ENST00000351808 KRTAP1-3Q8IUG1 177 aa8.05□□□□□ -1.12
IFT88-202ENST00000351808 H3BNG1 76 aa8.04□□□□□ -1.12
IFT88-202ENST00000351808 IGHV6-1A0A0B4J1U7 121 aa8.04□□□□□ -1.12
IFT88-202ENST00000351808 A0A1B0GU69 56 aa8.03□□□□□ -1.12
IFT88-202ENST00000351808 Q96NJ1 140 aa8.03□□□□□ -1.12
IFT88-202ENST00000351808 TEP1Q99973 2627 aaKnown RBP8.02□□□□□ -1.13
IFT88-202ENST00000351808 A0A087X002 238 aa8□□□□□ -1.13
IFT88-202ENST00000351808 ACYP2P14621 99 aa8□□□□□ -1.13
IFT88-202ENST00000351808 MIR22HGQ0VDD5 57 aa8□□□□□ -1.13
IFT88-202ENST00000351808 SPRR1BP22528 89 aa8□□□□□ -1.13
IFT88-202ENST00000351808 KRTAP11-1Q8IUC1 163 aa8□□□□□ -1.13
IFT88-202ENST00000351808 MRPL34Q9BQ48 92 aaKnown RBP7.99□□□□□ -1.13
IFT88-202ENST00000351808 NOTCH2NLQ7Z3S9 236 aa7.98□□□□□ -1.13
IFT88-202ENST00000351808 FBN1P35555 2871 aaKnown RBP7.98□□□□□ -1.13
IFT88-202ENST00000351808 ALMS1Q8TCU4 4167 aa7.97□□□□□ -1.13
IFT88-202ENST00000351808 DNAH10OSP0CZ25 163 aa7.97□□□□□ -1.13
IFT88-202ENST00000351808 FLNBO75369 2602 aaKnown RBP7.97□□□□□ -1.13
IFT88-202ENST00000351808 TENM1Q9UKZ4 2725 aa7.97□□□□□ -1.13
IFT88-202ENST00000351808 A0A1B0GVX0 72 aa7.96□□□□□ -1.14
IFT88-202ENST00000351808 Q5W150 140 aa7.96□□□□□ -1.14
IFT88-202ENST00000351808 KMT2BQ9UMN6 2715 aaPredicted RBP7.96□□□□□ -1.14
IFT88-202ENST00000351808 UQCR11O14957 56 aa7.95□□□□□ -1.14
IFT88-202ENST00000351808 ATRQ13535 2644 aa7.95□□□□□ -1.14
IFT88-202ENST00000351808 TENM3Q9P273 2699 aa7.94□□□□□ -1.14
IFT88-202ENST00000351808 C1orf134Q5TEV5 83 aa7.94□□□□□ -1.14
IFT88-202ENST00000351808 SMR3AQ99954 134 aa7.93□□□□□ -1.14
IFT88-202ENST00000351808 IGLV9-49A0A0B4J1Y8 123 aa7.92□□□□□ -1.14
IFT88-202ENST00000351808 CDK2AP2O75956 126 aa7.92□□□□□ -1.14
IFT88-202ENST00000351808 ZNF706Q9Y5V0 76 aaPredicted RBP7.92□□□□□ -1.14
IFT88-202ENST00000351808 KRTAP1-1Q07627 177 aa7.9□□□□□ -1.14
IFT88-202ENST00000351808 NSD1Q96L73 2696 aaPredicted RBP7.89□□□□□ -1.15
IFT88-202ENST00000351808 ZNF861PO60384 105 aa7.89□□□□□ -1.15
IFT88-202ENST00000351808 DMAC1Q96GE9 116 aa7.89□□□□□ -1.15
IFT88-202ENST00000351808 CHTF8P0CG12 524 aa7.88□□□□□ -1.15
IFT88-202ENST00000351808 COL7A1Q02388 2944 aa7.88□□□□□ -1.15
IFT88-202ENST00000351808 KRTAP13-3Q3SY46 172 aa7.87□□□□□ -1.15
IFT88-202ENST00000351808 J3QKU1 62 aa7.85□□□□□ -1.15
IFT88-202ENST00000351808 ROMO1P60602 79 aa7.81□□□□□ -1.16
IFT88-202ENST00000351808 DNAH1Q9P2D7 4330 aa7.81□□□□□ -1.16
IFT88-202ENST00000351808 SPINK6Q6UWN8 80 aa7.8□□□□□ -1.16
IFT88-202ENST00000351808 DNAH10Q8IVF4 4471 aa7.77□□□□□ -1.17
IFT88-202ENST00000351808 KRTAP25-1Q3LHN0 102 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms