RNA–Protein interactions for RNA: ENST00000342192.8

UBE2L3-201, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2L3, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-201ENST00000342192 REG3GQ6UW15 175 aa7.85□□□□□ -1.15
UBE2L3-201ENST00000342192 UBE2BP63146 152 aa7.84□□□□□ -1.15
UBE2L3-201ENST00000342192 CHKB-CPT1BH3BT56 60 aa7.83□□□□□ -1.16
UBE2L3-201ENST00000342192 SPRR4Q96PI1 79 aa7.83□□□□□ -1.16
UBE2L3-201ENST00000342192 NBEAL1Q6ZS30 2694 aa7.82□□□□□ -1.16
UBE2L3-201ENST00000342192 KRTAP1-5Q9BYS1 174 aa7.81□□□□□ -1.16
UBE2L3-201ENST00000342192 SMIM29Q86T20 159 aa7.81□□□□□ -1.16
UBE2L3-201ENST00000342192 A0A096LNI7 61 aa7.8□□□□□ -1.16
UBE2L3-201ENST00000342192 C16orf90A8MZG2 172 aa7.8□□□□□ -1.16
UBE2L3-201ENST00000342192 CNBPP62633 177 aaKnown RBP7.8□□□□□ -1.16
UBE2L3-201ENST00000342192 Q5VV11 94 aa7.78□□□□□ -1.16
UBE2L3-201ENST00000342192 LINC00476Q8WZB0 136 aa7.78□□□□□ -1.16
UBE2L3-201ENST00000342192 IGKV2-24A0A0C4DH68 120 aa7.78□□□□□ -1.16
UBE2L3-201ENST00000342192 PSCAO43653 123 aa7.78□□□□□ -1.16
UBE2L3-201ENST00000342192 A0A1W2PNN7 141 aa7.77□□□□□ -1.17
UBE2L3-201ENST00000342192 HCG22E2RYF7 251 aa7.76□□□□□ -1.17
UBE2L3-201ENST00000342192 H3BS24 57 aa7.76□□□□□ -1.17
UBE2L3-201ENST00000342192 DSCR10P59022 87 aa7.76□□□□□ -1.17
UBE2L3-201ENST00000342192 PRLHP81277 87 aa7.76□□□□□ -1.17
UBE2L3-201ENST00000342192 MGAM2Q2M2H8 2515 aa7.75□□□□□ -1.17
UBE2L3-201ENST00000342192 PRR15LQ9BU68 103 aa7.75□□□□□ -1.17
UBE2L3-201ENST00000342192 DNAH10Q8IVF4 4471 aa7.75□□□□□ -1.17
UBE2L3-201ENST00000342192 IGFL1Q6UW32 110 aa7.74□□□□□ -1.17
UBE2L3-201ENST00000342192 UBE2DNLQ8IWF7 75 aa7.73□□□□□ -1.17
UBE2L3-201ENST00000342192 LYSTQ99698 3801 aa7.73□□□□□ -1.17
UBE2L3-201ENST00000342192 K7EQZ3 153 aa7.73□□□□□ -1.17
UBE2L3-201ENST00000342192 IGLV8-61A0A075B6I0 122 aa7.73□□□□□ -1.17
UBE2L3-201ENST00000342192 APLNQ9ULZ1 77 aa7.73□□□□□ -1.17
UBE2L3-201ENST00000342192 UBE2AP49459 152 aa7.72□□□□□ -1.17
UBE2L3-201ENST00000342192 C14orf177Q52M58 125 aa7.72□□□□□ -1.17
UBE2L3-201ENST00000342192 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.72□□□□□ -1.17
UBE2L3-201ENST00000342192 A0A0G2JQZ4 141 aa7.71□□□□□ -1.17
UBE2L3-201ENST00000342192 A6NED7 52 aa7.71□□□□□ -1.17
UBE2L3-201ENST00000342192 LCE6AA0A183 80 aa7.71□□□□□ -1.18
UBE2L3-201ENST00000342192 LCA10Q71F78 164 aa7.71□□□□□ -1.18
UBE2L3-201ENST00000342192 C8orf87E5RJ46 101 aa7.7□□□□□ -1.18
UBE2L3-201ENST00000342192 DNAH9Q9NYC9 4486 aa7.7□□□□□ -1.18
UBE2L3-201ENST00000342192 STAB2Q8WWQ8 2551 aa7.69□□□□□ -1.18
UBE2L3-201ENST00000342192 CHTF8P0CG12 524 aa7.69□□□□□ -1.18
UBE2L3-201ENST00000342192 KRTAP11-1Q8IUC1 163 aa7.69□□□□□ -1.18
UBE2L3-201ENST00000342192 PHF5AQ7RTV0 110 aaKnown RBP7.69□□□□□ -1.18
UBE2L3-201ENST00000342192 MDFIQ99750 246 aa7.69□□□□□ -1.18
UBE2L3-201ENST00000342192 DEFB116Q30KQ4 102 aa7.68□□□□□ -1.18
UBE2L3-201ENST00000342192 H0Y9J4 135 aa7.67□□□□□ -1.18
UBE2L3-201ENST00000342192 DYNC2H1Q8NCM8 4307 aaKnown RBP7.67□□□□□ -1.18
UBE2L3-201ENST00000342192 A0A087WSZ3 146 aa7.67□□□□□ -1.18
UBE2L3-201ENST00000342192 COL7A1Q02388 2944 aa7.66□□□□□ -1.18
UBE2L3-201ENST00000342192 NDUFS5O43920 106 aa7.66□□□□□ -1.18
UBE2L3-201ENST00000342192 SPRR1BP22528 89 aa7.66□□□□□ -1.18
UBE2L3-201ENST00000342192 C9orf163Q8N9P6 203 aa7.65□□□□□ -1.18
UBE2L3-201ENST00000342192 A6NN06 94 aa7.65□□□□□ -1.18
UBE2L3-201ENST00000342192 DNHD1Q96M86 4753 aa7.65□□□□□ -1.19
UBE2L3-201ENST00000342192 ATP11AUNQ6ZP68 121 aa7.65□□□□□ -1.19
UBE2L3-201ENST00000342192 Q8N9P0 234 aaPredicted RBP7.64□□□□□ -1.19
UBE2L3-201ENST00000342192 ZCCHC13Q8WW36 166 aaKnown RBP7.63□□□□□ -1.19
UBE2L3-201ENST00000342192 NBDYA0A0U1RRE5 68 aa7.62□□□□□ -1.19
UBE2L3-201ENST00000342192 B9D2Q9BPU9 175 aa7.62□□□□□ -1.19
UBE2L3-201ENST00000342192 C7orf65Q6ZTY9 151 aa7.62□□□□□ -1.19
UBE2L3-201ENST00000342192 DNAH7Q8WXX0 4024 aa7.61□□□□□ -1.19
UBE2L3-201ENST00000342192 PRAC1Q96KF2 57 aa7.61□□□□□ -1.19
UBE2L3-201ENST00000342192 CYP4F30PQ9H0H9 118 aa7.61□□□□□ -1.19
UBE2L3-201ENST00000342192 Q6ZRN7 208 aaPredicted RBP7.6□□□□□ -1.19
UBE2L3-201ENST00000342192 CSMD3Q7Z407 3707 aa7.6□□□□□ -1.19
UBE2L3-201ENST00000342192 WFDC13Q8IUB5 93 aa7.59□□□□□ -1.19
UBE2L3-201ENST00000342192 PANO1I0J062 215 aa7.59□□□□□ -1.19
UBE2L3-201ENST00000342192 RPL37AP61513 92 aaKnown RBP7.59□□□□□ -1.19
UBE2L3-201ENST00000342192 LINC00208Q96KT6 92 aa7.59□□□□□ -1.19
UBE2L3-201ENST00000342192 KRTAP13-1Q8IUC0 172 aa7.58□□□□□ -1.2
UBE2L3-201ENST00000342192 LIMD2Q9BT23 127 aa7.58□□□□□ -1.2
UBE2L3-201ENST00000342192 NUPR2A6NF83 97 aa7.58□□□□□ -1.2
UBE2L3-201ENST00000342192 PLECQ15149 4684 aaKnown RBP7.57□□□□□ -1.2
UBE2L3-201ENST00000342192 KRTAP29-1A8MX34 341 aaPredicted RBP7.57□□□□□ -1.2
UBE2L3-201ENST00000342192 MOBPQ13875 183 aa7.56□□□□□ -1.2
UBE2L3-201ENST00000342192 LINC00472Q9H8W2 130 aa7.56□□□□□ -1.2
UBE2L3-201ENST00000342192 A8MWP4 228 aa7.54□□□□□ -1.2
UBE2L3-201ENST00000342192 SRRM2Q9UQ35 2752 aaKnown RBP7.54□□□□□ -1.2
UBE2L3-201ENST00000342192 SPACA4Q8TDM5 124 aa7.54□□□□□ -1.2
UBE2L3-201ENST00000342192 CASC2Q6XLA1 102 aa7.53□□□□□ -1.2
UBE2L3-201ENST00000342192 TENM2Q9NT68 2774 aa7.53□□□□□ -1.2
UBE2L3-201ENST00000342192 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.53□□□□□ -1.2
UBE2L3-201ENST00000342192 MP68P56378 58 aa7.52□□□□□ -1.21
UBE2L3-201ENST00000342192 ADM2Q7Z4H4 148 aa7.52□□□□□ -1.21
UBE2L3-201ENST00000342192 NDUFB1O75438 58 aa7.52□□□□□ -1.21
UBE2L3-201ENST00000342192 Q75L30 129 aa7.52□□□□□ -1.21
UBE2L3-201ENST00000342192 CDC42SE1Q9NRR8 79 aa7.52□□□□□ -1.21
UBE2L3-201ENST00000342192 SPAG11AQ6PDA7 123 aa7.51□□□□□ -1.21
UBE2L3-201ENST00000342192 LINC00313P59037 77 aa7.5□□□□□ -1.21
UBE2L3-201ENST00000342192 MEGF8Q7Z7M0 2845 aa7.5□□□□□ -1.21
UBE2L3-201ENST00000342192 PRKDCP78527 4128 aaKnown RBP7.49□□□□□ -1.21
UBE2L3-201ENST00000342192 A0A087WTM6 91 aa7.48□□□□□ -1.21
UBE2L3-201ENST00000342192 SPINK7P58062 85 aa7.48□□□□□ -1.21
UBE2L3-201ENST00000342192 LINC00483Q53H64 154 aa7.48□□□□□ -1.21
UBE2L3-201ENST00000342192 LOC101927531A0A1B0GV80 90 aa7.47□□□□□ -1.21
UBE2L3-201ENST00000342192 H0Y9P7 68 aa7.47□□□□□ -1.21
UBE2L3-201ENST00000342192 STARD9Q9P2P6 4700 aa7.47□□□□□ -1.21
UBE2L3-201ENST00000342192 IGLV9-49A0A0B4J1Y8 123 aa7.47□□□□□ -1.21
UBE2L3-201ENST00000342192 MMP24-AS1A0A0U1RRL7 71 aa7.47□□□□□ -1.21
UBE2L3-201ENST00000342192 H3BPC8 53 aa7.47□□□□□ -1.21
UBE2L3-201ENST00000342192 VPS13DQ5THJ4 4388 aa7.47□□□□□ -1.21
UBE2L3-201ENST00000342192 COA5Q86WW8 74 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms